arXiv subjects

Yuxuan Chen

Publications and source records attributed to Yuxuan Chen.

At least 91 records · Page 5Linked to original sources

arXiv2025

Reinforcement Learning for Robotic Safe Control with Force Sensing

For the task with complicated manipulation in unstructured environments, traditional hand-coded methods are ineffective, while reinforcement learning can provide more general and useful policy. Although the reinforcement learning is able to obtain impressive results, its stability and reliability is hard to guarantee, which would cause the potential safety threats. Besides, the transfer from simulation to real world also will lead in unpredictable situations. To enhance the safety and reliability of robots, we introduce the force and haptic perception into reinforcement learning. Force and tactual sensation play key roles in robotic dynamic control and human-robot interaction. We demonstrate that the force-based reinforcement learning method can be more adaptive to environment, especially in sim-to-real transfer. Experimental results show in object pushing task, our strategy is safer and more efficient in both simulation and real world, thus it holds prospects for a wide variety of robotic applications.

cs.RO↗

arXiv2025

Towards the Automatic Segmentation, Modeling and Meshing of the Aortic Vessel Tree from Multicenter Acquisitions: An Overview of the SEG.A. 2023 Segmentation of the Aorta Challenge

The automated analysis of the aortic vessel tree (AVT) from computed tomography angiography (CTA) holds immense clinical potential, but its development has been impeded by a lack of shared, high-quality data. We launched the SEG.A. challenge to catalyze progress in this field by introducing a large, publicly available, multi-institutional dataset for AVT segmentation. The challenge benchmarked automated algorithms on a hidden test set, with subsequent optional tasks in surface meshing for computational simulations. Our findings reveal a clear convergence on deep learning methodologies, with 3D U-Net architectures dominating the top submissions. A key result was that an ensemble of the highest-ranking algorithms significantly outperformed individual models, highlighting the benefits of model fusion. Performance was strongly linked to algorithmic design, particularly the use of customized post-processing steps, and the characteristics of the training data. This initiative not only establishes a new performance benchmark but also provides a lasting resource to drive future innovation toward robust, clinically translatable tools.

cs.CV↗

arXiv2025

Law in Silico: Simulating Legal Society with LLM-Based Agents

Since real-world legal experiments are often costly or infeasible, simulating legal societies with Artificial Intelligence (AI) systems provides an effective alternative for verifying and developing legal theory, as well as supporting legal administration. Large Language Models (LLMs), with their world knowledge and role-playing capabilities, are strong candidates to serve as the foundation for legal society simulation. However, the application of LLMs to simulate legal systems remains underexplored. In this work, we introduce Law in Silico, an LLM-based agent framework for simulating legal scenarios with individual decision-making and institutional mechanisms of legislation, adjudication, and enforcement. Our experiments, which compare simulated crime rates with real-world data, demonstrate that LLM-based agents can largely reproduce macro-level crime trends and provide insights that align with real-world observations. At the same time, micro-level simulations reveal that a well-functioning, transparent, and adaptive legal system offers better protection of the rights of vulnerable individuals.

cs.AI↗

arXiv2025

RustRepoTrans: Repository-level Code Translation Benchmark Targeting Rust

Recent advancements in large language models (LLMs) have demonstrated impressive capabilities in code translation, typically evaluated using benchmarks like CodeTransOcean and RepoTransBench. However, dependency-free benchmarks fail to capture real-world complexities by focusing primarily on simple function-level translations and overlooking repository-level context (e.g., dependencies). Full-repository translation benchmarks significantly exceed the current capabilities of existing models, resulting in performance bottlenecks that fail to provide actionable insights for guiding model development. Furthermore, existing benchmarks do not account for the scenario of incrementally translating new or modified modules from the source to the target language, which demands careful handling of repository-level contexts such as dependencies, cross-module references, and architectural divergence. Moreover, LLMs' effectiveness in translating to newer, low-resource languages like Rust remains largely underexplored. To address these gaps, we introduce RustRepoTrans, the first repository-level context code translation benchmark targeting incremental translation, comprising 375 tasks translating into Rust from C, Java, and Python. Using this benchmark, we evaluate seven representative LLMs, analyzing their errors to assess limitations in complex translation scenarios. Among them, DeepSeek-R1 performs best with 51.5% Pass@1, excelling in both basic functionality and additional translation abilities, such as noise robustness and syntactical difference identification. However, even DeepSeek-R1 experiences a 22.2% performance drop (Pass@1 from 73.7% to 51.5%) when handling repository-level context compared to previous benchmarks without such context.

cs.SE↗

arXiv2025

MetaMind: Modeling Human Social Thoughts with Metacognitive Multi-Agent Systems

Human social interactions depend on the ability to infer others' unspoken intentions, emotions, and beliefs-a cognitive skill grounded in the psychological concept of Theory of Mind (ToM). While large language models (LLMs) excel in semantic understanding tasks, they struggle with the ambiguity and contextual nuance inherent in human communication. To bridge this gap, we introduce MetaMind, a multi-agent framework inspired by psychological theories of metacognition, designed to emulate human-like social reasoning. MetaMind decomposes social understanding into three collaborative stages: (1) a Theory-of-Mind Agent generates hypotheses about user mental states (e.g., intent, emotion), (2) a Moral Agent refines these hypotheses using cultural norms and ethical constraints, and (3) a Response Agent generates contextually appropriate responses while validating alignment with inferred intent. Our framework achieves state-of-the-art performance across three challenging benchmarks, with 35.7% improvement in real-world social scenarios and 6.2% gain in ToM reasoning. Notably, it enables LLMs to match human-level performance on key ToM tasks for the first time. Ablation studies confirm the necessity of all components, which showcase the framework's ability to balance contextual plausibility, social appropriateness, and user adaptation. This work advances AI systems toward human-like social intelligence, with applications in empathetic dialogue and culturally sensitive interactions. Code is available at https://github.com/XMZhangAI/MetaMind.

cs.CL↗

arXiv2025

Cognition-of-Thought Elicits Social-Aligned Reasoning in Large Language Models

Large language models (LLMs) excel at complex reasoning but can still exhibit harmful behaviors. Current alignment strategies typically embed safety into model weights, making these controls implicit, static, and difficult to modify. This paper introduces Cognition-of-Thought (CooT), a novel decoding-time framework that equips LLMs with an explicit cognitive self-monitoring loop. CooT couples a standard text Generator with a cognitive Perceiver that continuously monitors the unfolding sequence. The Perceiver uses a structured, precedence-based hierarchy of principles (e.g., safety over obedience) to detect potential misalignments as they arise. When violations are flagged, CooT intervenes by rolling back the generation to the point of error and regenerating under injected guidance that combines universal social priors with context-specific warnings. CooT thus transforms alignment from a fixed property into an explicit, dynamic, and auditable process active during inference, allowing for flexible policy updates without retraining the model. Extensive experiments across multiple benchmarks and model families confirm that CooT consistently improves safety and social reasoning performance.

cs.CL↗

arXiv2025

A Large-Language-Model Assisted Automated Scale Bar Detection and Extraction Framework for Scanning Electron Microscopic Images

Microscopic characterizations, such as Scanning Electron Microscopy (SEM), are widely used in scientific research for visualizing and analyzing microstructures. Determining the scale bars is an important first step of accurate SEM analysis; however, currently, it mainly relies on manual operations, which is both time-consuming and prone to errors. To address this issue, we propose a multi-modal and automated scale bar detection and extraction framework that provides concurrent object detection, text detection and text recognition with a Large Language Model (LLM) agent. The proposed framework operates in four phases; i) Automatic Dataset Generation (Auto-DG) model to synthesize a diverse dataset of SEM images ensuring robust training and high generalizability of the model, ii) scale bar object detection, iii) information extraction using a hybrid Optical Character Recognition (OCR) system with DenseNet and Convolutional Recurrent Neural Network (CRNN) based algorithms, iv) an LLM agent to analyze and verify accuracy of the results. The proposed model demonstrates a strong performance in object detection and accurate localization with a precision of 100%, recall of 95.8%, and a mean Average Precision (mAP) of 99.2% at IoU=0.5 and 69.1% at IoU=0.5:0.95. The hybrid OCR system achieved 89% precision, 65% recall, and a 75% F1 score on the Auto-DG dataset, significantly outperforming several mainstream standalone engines, highlighting its reliability for scientific image analysis. The LLM is introduced as a reasoning engine as well as an intelligent assistant that suggests follow-up steps and verifies the results. This automated method powered by an LLM agent significantly enhances the efficiency and accuracy of scale bar detection and extraction in SEM images, providing a valuable tool for microscopic analysis and advancing the field of scientific imaging.

cs.CV↗

arXiv2025

Generating High-Quality Datasets for Code Editing via Open-Source Language Models

Code editing plays a vital role in software engineering, requiring developers to adjust existing code according to natural language instructions while keeping functionality intact and avoiding unnecessary modifications. However, commit-based datasets commonly used for this task are often noisy, lack diversity, and fail to reflect the style of real-world edit instructions. To address this, we introduce OpenCodeEdit, an open-source pipeline that leverages multiple LLMs to synthesize realistic code-edit triplets. The pipeline produces both concise "lazy" instructions and more detailed "descriptive" ones, and applies filtering based on diffs and topics to guarantee data quality and variety. Using this process, we construct OCEDataFT, a curated dataset of 20K samples. Fine-tuning three advanced base models on OCEDataFT leads to significant performance boosts on the CanItEdit benchmark, with relative pass@1 improvements ranging from 4.50% to 20.79%. Notably, the resulting models achieve performance close to closed-source systems, narrowing the gap to GPT-4 to just 3.54%, without relying on proprietary resources or manual annotation.

cs.SE↗

arXiv2025

From Turn-Taking to Synchronous Dialogue: A Survey of Full-Duplex Spoken Language Models

True Full-Duplex (TFD) voice communication--enabling simultaneous listening and speaking with natural turn-taking, overlapping speech, and interruptions--represents a critical milestone toward human-like AI interaction. This survey comprehensively reviews Full-Duplex Spoken Language Models (FD-SLMs) in the LLM era. We establish a taxonomy distinguishing Engineered Synchronization (modular architectures) from Learned Synchronization (end-to-end architectures), and unify fragmented evaluation approaches into a framework encompassing Temporal Dynamics, Behavioral Arbitration, Semantic Coherence, and Acoustic Performance. Through comparative analysis of mainstream FD-SLMs, we identify fundamental challenges: synchronous data scarcity, architectural divergence, and evaluation gaps, providing a roadmap for advancing human-AI communication.

cs.CL↗

arXiv2025

Simulating Human-like Daily Activities with Desire-driven Autonomy

Desires motivate humans to interact autonomously with the complex world. In contrast, current AI agents require explicit task specifications, such as instructions or reward functions, which constrain their autonomy and behavioral diversity. In this paper, we introduce a Desire-driven Autonomous Agent (D2A) that can enable a large language model (LLM) to autonomously propose and select tasks, motivated by satisfying its multi-dimensional desires. Specifically, the motivational framework of D2A is mainly constructed by a dynamic Value System, inspired by the Theory of Needs. It incorporates an understanding of human-like desires, such as the need for social interaction, personal fulfillment, and self-care. At each step, the agent evaluates the value of its current state, proposes a set of candidate activities, and selects the one that best aligns with its intrinsic motivations. We conduct experiments on Concordia, a text-based simulator, to demonstrate that our agent generates coherent, contextually relevant daily activities while exhibiting variability and adaptability similar to human behavior. A comparative analysis with other LLM-based agents demonstrates that our approach significantly enhances the rationality of the simulated activities.

cs.AI↗

arXiv2025

AgriGPT: a Large Language Model Ecosystem for Agriculture

Despite the rapid progress of Large Language Models (LLMs), their application in agriculture remains limited due to the lack of domain-specific models, curated datasets, and robust evaluation frameworks. To address these challenges, we propose AgriGPT, a domain-specialized LLM ecosystem for agricultural usage. At its core, we design a multi-agent scalable data engine that systematically compiles credible data sources into Agri-342K, a high-quality, standardized question-answer (QA) dataset. Trained on this dataset, AgriGPT supports a broad range of agricultural stakeholders, from practitioners to policy-makers. To enhance factual grounding, we employ Tri-RAG, a three-channel Retrieval-Augmented Generation framework combining dense retrieval, sparse retrieval, and multi-hop knowledge graph reasoning, thereby improving the LLM's reasoning reliability. For comprehensive evaluation, we introduce AgriBench-13K, a benchmark suite comprising 13 tasks with varying types and complexities. Experiments demonstrate that AgriGPT significantly outperforms general-purpose LLMs on both domain adaptation and reasoning. Beyond the model itself, AgriGPT represents a modular and extensible LLM ecosystem for agriculture, comprising structured data construction, retrieval-enhanced generation, and domain-specific evaluation. This work provides a generalizable framework for developing scientific and industry-specialized LLMs. All models, datasets, and code will be released to empower agricultural communities, especially in underserved regions, and to promote open, impactful research.

cs.AI↗

arXiv2025

Deformable Attention Graph Representation Learning for Histopathology Whole Slide Image Analysis

Accurate classification of Whole Slide Images (WSIs) and Regions of Interest (ROIs) is a fundamental challenge in computational pathology. While mainstream approaches often adopt Multiple Instance Learning (MIL), they struggle to capture the spatial dependencies among tissue structures. Graph Neural Networks (GNNs) have emerged as a solution to model inter-instance relationships, yet most rely on static graph topologies and overlook the physical spatial positions of tissue patches. Moreover, conventional attention mechanisms lack specificity, limiting their ability to focus on structurally relevant regions. In this work, we propose a novel GNN framework with deformable attention for pathology image analysis. We construct a dynamic weighted directed graph based on patch features, where each node aggregates contextual information from its neighbors via attention-weighted edges. Specifically, we incorporate learnable spatial offsets informed by the real coordinates of each patch, enabling the model to adaptively attend to morphologically relevant regions across the slide. This design significantly enhances the contextual field while preserving spatial specificity. Our framework achieves state-of-the-art performance on four benchmark datasets (TCGA-COAD, BRACS, gastric intestinal metaplasia grading, and intestinal ROI classification), demonstrating the power of deformable attention in capturing complex spatial structures in WSIs and ROIs.

cs.CV↗

arXiv2025

De novo design of alpha-helical peptide amphiphiles repairing fragmented collagen type I via supramolecular co-assembly

The hierarchical triple-helix structure of collagen type I, Col I, is essential for extracellular matrix support and integrity. However, current reconstruction strategies face challenges such as chain mismatch, preventing proper fibril formation. Here, we report a supramolecular co-assembly strategy using a de novo-designed alpha-helical peptide amphiphile (APA) of just seven amino acids. The APA features a hydrophobic palmitic acid tail, which stabilizes the helical structure and promotes co-assembly upon interaction with complementary molecular structures. This minimal design enables selective recognition of fragmented collagen (FC), restoring triple-helix conformation and guiding fibre formation. We applied this mechanism to engineer FC-rich nanofat (NF) into a mechanically reinforced biomaterial. Integration of APA-NF with coaxial 3D printing enabled spatial control of structure and function. In a porcine model, this platform enhanced in situ vascularized adipose tissue regeneration. Our results demonstrate that hierarchical reconstruction of collagen via peptide-guided supramolecular assembly offers a promising strategy for soft tissue repair.

physics.chem-ph↗

arXiv2025

Towards Exception Safety Code Generation with Intermediate Representation Agents Framework

Large Language Models (LLMs) often struggle with robust exception handling in generated code, leading to fragile programs that are prone to runtime errors. We propose Seeker, a novel multi-agent framework that enforces exception safety in LLM generated code through an Intermediate Representation (IR) approach. Seeker decomposes exception handling into five specialized agents: Scanner, Detector, Predator, Ranker, and Handler that collaboratively analyze code, detect fragile segments, retrieve best practice exception strategies, and inject robust handling code. We also introduce Common Exception Enumeration (CEE), a comprehensive knowledge base derived from official documentation, technical practices, and real world code, to standardize exception handling strategies. Seeker also incorporates a Deep Retrieval-Augmented Generation (Deep RAG) algorithm to efficiently navigate the exception inheritance hierarchy, cutting down search overhead by 93% while improving accuracy in identifying relevant exceptions. We evaluate Seeker on 15 open source Java projects and multiple benchmarks. Seeker outperforms state of the art baselines, improving exception handling precision by up to 37% and overall code robustness by 38% as measured by expert code review. It significantly closes the gap between LLM and human developers in exception management, achieving a 28% success rate on real world issue fixes (SWE bench) versus 19% by prior methods. Our framework preserves functional correctness of code while proactively handling errors, demonstrating a practical, generalizable solution for safer code generation. In this paper, we discuss the novelty of using intermediate representation and multi-agent collaboration for exception handling, and outline how Seeker can be extended to other programming languages and complex software engineering tasks, aligning LLM-generated code with industrial standard.

cs.SE↗

arXiv2025

CHIME: Conditional Hallucination and Integrated Multi-scale Enhancement for Time Series Diffusion Model

The denoising diffusion probabilistic model has become a mainstream generative model, achieving significant success in various computer vision tasks. Recently, there has been initial exploration of applying diffusion models to time series tasks. However, existing studies still face challenges in multi-scale feature alignment and generative capabilities across different entities and long-time scales. In this paper, we propose CHIME, a conditional hallucination and integrated multi-scale enhancement framework for time series diffusion models. By employing multi-scale decomposition and integration, CHIME captures the decomposed features of time series, achieving in-domain distribution alignment between generated and original samples. In addition, we introduce a feature hallucination module in the conditional denoising process, enabling the temporal features transfer across long-time scales. Experimental results on publicly available real-world datasets demonstrate that CHIME achieves state-of-the-art performance and exhibits excellent generative generalization capabilities in few-shot scenarios.

cs.CV↗

arXiv2025

DicFace: Dirichlet-Constrained Variational Codebook Learning for Temporally Coherent Video Face Restoration

Video face restoration faces a critical challenge in maintaining temporal consistency while recovering fine facial details from degraded inputs. This paper presents a novel approach that extends Vector-Quantized Variational Autoencoders (VQ-VAEs), pretrained on static high-quality portraits, into a video restoration framework through variational latent space modeling. Our key innovation lies in reformulating discrete codebook representations as Dirichlet-distributed continuous variables, enabling probabilistic transitions between facial features across frames. A spatio-temporal Transformer architecture jointly models inter-frame dependencies and predicts latent distributions, while a Laplacian-constrained reconstruction loss combined with perceptual (LPIPS) regularization enhances both pixel accuracy and visual quality. Comprehensive evaluations on blind face restoration, video inpainting, and facial colorization tasks demonstrate state-of-the-art performance. This work establishes an effective paradigm for adapting intensive image priors, pretrained on high-quality images, to video restoration while addressing the critical challenge of flicker artifacts. The source code has been open-sourced and is available at https://github.com/fudan-generative-vision/DicFace.

cs.CV↗

arXiv2025

SocialEval: Evaluating Social Intelligence of Large Language Models

LLMs exhibit promising Social Intelligence (SI) in modeling human behavior, raising the need to evaluate LLMs' SI and their discrepancy with humans. SI equips humans with interpersonal abilities to behave wisely in navigating social interactions to achieve social goals. This presents an operational evaluation paradigm: outcome-oriented goal achievement evaluation and process-oriented interpersonal ability evaluation, which existing work fails to address. To this end, we propose SocialEval, a script-based bilingual SI benchmark, integrating outcome- and process-oriented evaluation by manually crafting narrative scripts. Each script is structured as a world tree that contains plot lines driven by interpersonal ability, providing a comprehensive view of how LLMs navigate social interactions. Experiments show that LLMs fall behind humans on both SI evaluations, exhibit prosociality, and prefer more positive social behaviors, even if they lead to goal failure. Analysis of LLMs' formed representation space and neuronal activations reveals that LLMs have developed ability-specific functional partitions akin to the human brain.

cs.CL↗

arXiv2025

Conversational Exploration of Literature Landscape with LitChat

We are living in an era of "big literature", where the volume of digital scientific publications is growing exponentially. While offering new opportunities, this also poses challenges for understanding literature landscapes, as traditional manual reviewing is no longer feasible. Recent large language models (LLMs) have shown strong capabilities for literature comprehension, yet they are incapable of offering "comprehensive, objective, open and transparent" views desired by systematic reviews due to their limited context windows and trust issues like hallucinations. Here we present LitChat, an end-to-end, interactive and conversational literature agent that augments LLM agents with data-driven discovery tools to facilitate literature exploration. LitChat automatically interprets user queries, retrieves relevant sources, constructs knowledge graphs, and employs diverse data-mining techniques to generate evidence-based insights addressing user needs. We illustrate the effectiveness of LitChat via a case study on AI4Health, highlighting its capacity to quickly navigate the users through large-scale literature landscape with data-based evidence that is otherwise infeasible with traditional means.

cs.CL↗