arXiv subjects

Zachary F. Fisher

Publications and source records attributed to Zachary F. Fisher.

10 recordsLinked to original sources

arXiv2026

Analytic Standard Errors for Latent Gaussian Discrete-Valued Multivariate Time Series

Unlike their continuous-valued counterparts, there are no universally preferred methodologies for modeling discrete-valued time series. This is especially problematic in fields such as psychology and education, where repeated-measures data often take the form of count, dichotomous, and ordered categorical variables. To address the need for flexible methodology for analyzing discrete-valued time series data, a copula-style multivariate model defined through deterministic functions of a latent stationary Gaussian vector series has been proposed. This model has several promising features, including the ability to accommodate a wide variety of marginal distributions within the same model while also allowing for the most flexible autocorrelation structure possible. We extend this framework by deriving analytic standard errors to facilitate inference on the latent Gaussian dynamics. In so doing, we establish the joint asymptotic normality of estimators of the parameters governing the latent Gaussian series and the marginal distributions. The performance of these analytic standard errors is examined in a simulation study and an empirical application.

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arXiv2025

Joint modeling and inference of multiple-subject high-dimensional sparse vector autoregressive models

The multiple-subject vector autoregression (multi-VAR) model captures heterogeneous network Granger causality across subjects by decomposing individual sparse VAR transition matrices into commonly shared and subject-unique paths. The model has been applied to characterize hidden shared and unique paths among subjects and has demonstrated performance compared to methods commonly used in psychology and neuroscience. Despite this innovation, the model suffers from using a weighted median for identifying the common effects, leading to statistical inefficiency as the convergence rates of the common and unique paths are determined by the least sparse subject and the smallest sample size across all subjects. We propose a new identifiability condition for the multi-VAR model based on a communication-efficient data integration framework. We show that this approach achieves convergence rates tailored to each subject's sparsity level and sample size. Furthermore, we develop hypothesis tests to assess the nullity and homogeneity of individual paths, using Wald-type test statistics constructed from individual debiased estimators. A test for the significance of the common paths can also be derived through the framework. Simulation studies under various heterogeneity scenarios and a real data application demonstrate the performance of the proposed method compared to existing benchmark across standard evaluation metrics.

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arXiv2025

Latent Gaussian dynamic factor modeling and forecasting for multivariate count time series

This work considers estimation and forecasting in a multivariate, possibly high-dimensional count time series model constructed from a transformation of a latent Gaussian dynamic factor series. The estimation of the latent model parameters is based on second-order properties of the count and underlying Gaussian time series, yielding estimators of the underlying covariance matrices for which standard principal component analysis applies. Theoretical consistency results are established for the proposed estimation, building on certain concentration results for the models of the type considered. They also involve the memory of the latent Gaussian process, quantified through a spectral gap, shown to be suitably bounded as the model dimension increases, which is of independent interest. In addition, novel cross-validation schemes are suggested for model selection. The forecasting is carried out through a particle-based sequential Monte Carlo, leveraging Kalman filtering techniques. A simulation study and an application are also considered.

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arXiv2024

Penalized Subgrouping of Heterogeneous Time Series

Interest in the study and analysis of dynamic processes in the social, behavioral, and health sciences has burgeoned in recent years due to the increased availability of intensive longitudinal data. However, how best to model and account for the persistent heterogeneity characterizing such processes remains an open question. The multi-VAR framework, a recent methodological development built on the vector autoregressive model, accommodates heterogeneous dynamics in multiple-subject time series through structured penalization. In the original multi-VAR proposal, individual-level transition matrices are decomposed into common and unique dynamics, allowing for generalizable and person-specific features. The current project extends this framework to allow additionally for the identification and penalized estimation of subgroup-specific dynamics; that is, patterns of dynamics that are shared across subsets of individuals. The performance of the proposed subgrouping extension is evaluated in the context of both a simulation study and empirical application, and results are compared to alternative methods for subgrouping multiple-subject, multivariate time series.

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arXiv2024

Group integrative dynamic factor models with application to multiple subject brain connectivity

This work introduces a novel framework for dynamic factor model-based group-level analysis of multiple subjects time series data, called GRoup Integrative DYnamic factor (GRIDY) models. The framework identifies and characterizes inter-subject similarities and differences between two pre-determined groups by considering a combination of group spatial information and individual temporal dynamics. Furthermore, it enables the identification of intra-subject similarities and differences over time by employing different model configurations for each subject. Methodologically, the framework combines a novel principal angle-based rank selection algorithm and a non-iterative integrative analysis framework. Inspired by simultaneous component analysis, this approach also reconstructs identifiable latent factor series with flexible covariance structures. The performance of the GRIDY models is evaluated through simulations conducted under various scenarios. An application is also presented to compare resting-state functional MRI data collected from multiple subjects in autism spectrum disorder and control groups.

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arXiv2024

Optimal Instrument Selection using Bayesian Model Averaging for Model Implied Instrumental Variable Two Stage Least Squares Estimators

Model-Implied Instrumental Variable Two-Stage Least Squares (MIIV-2SLS) is a limited information, equation-by-equation, non-iterative estimator for latent variable models. Associated with this estimator are equation specific tests of model misspecification. One issue with equation specific tests is that they lack specificity, in that they indicate that some instruments are problematic without revealing which specific ones. Instruments that are poor predictors of their target variables (weak instruments) is a second potential problem. We propose a novel extension to detect instrument specific tests of misspecification and weak instruments. We term this the Model-Implied Instrumental Variable Two-Stage Bayesian Model Averaging (MIIV-2SBMA) estimator. We evaluate the performance of MIIV-2SBMA against MIIV-2SLS in a simulation study and show that it has comparable performance in terms of parameter estimation. Additionally, our instrument specific overidentification tests developed within the MIIV-2SBMA framework show increased power to detect specific problematic and weak instruments. Finally, we demonstrate MIIV-2SBMA using an empirical example.

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arXiv2023

Structured Estimation of Heterogeneous Time Series

How best to model structurally heterogeneous processes is a foundational question in the social, health and behavioral sciences. Recently, Fisher et al., (2022) introduced the multi-VAR approach for simultaneously estimating multiple-subject multivariate time series characterized by common and individualizing features using penalized estimation. This approach differs from many popular modeling approaches for multiple-subject time series in that qualitative and quantitative differences in a large number of individual dynamics are well-accommodated. The current work extends the multi-VAR framework to include new adaptive weighting schemes that greatly improve estimation performance. In a small set of simulation studies we compare adaptive multi-VAR with these new penalty weights to common alternative estimators in terms of path recovery and bias. Furthermore, we provide toy examples and code demonstrating the utility of multi-VAR under different heterogeneity regimes using the multivar package for R (Fisher, 2022).

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arXiv2022

Penalized Estimation and Forecasting of Multiple Subject Intensive Longitudinal Data

Intensive Longitudinal Data (ILD) is increasingly available to social and behavioral scientists. With this increased availability come new opportunities for modeling and predicting complex biological, behavioral, and physiological phenomena. Despite these new opportunities psychological researchers have not taken full advantage of promising opportunities inherent to this data, the potential to forecast psychological processes at the individual level. To address this gap in the literature we present a novel modeling framework that addresses a number of topical challenges and open questions in the psychological literature on modeling dynamic processes. First, how can we model and forecast ILD when the length of individual time series and the number of variables collected are roughly equivalent, or when time series lengths are shorter than what is typically required for time series analyses? Second, how can we best take advantage of the cross-sectional (between-person) information inherent to most ILD scenarios while acknowledging individuals differ both quantitatively (e.g. in parameter magnitude) and qualitatively (e.g. in structural dynamics)? Despite the acknowledged between-person heterogeneity in many psychological processes is it possible to leverage group-level information to support improved forecasting at the individual level? In the remainder of the manuscript, we attempt to address these and other pressing questions relevant to the forecasting of multiple-subject ILD.

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arXiv2020

A Square-Root Second-Order Extended Kalman Filtering Approach for Estimating Smoothly Time-Varying Parameters

Researchers collecting intensive longitudinal data (ILD) are increasingly looking to model psychological processes, such as emotional dynamics, that organize and adapt across time in complex and meaningful ways. This is also the case for researchers looking to characterize the impact of an intervention on individual behavior. To be useful, statistical models must be capable of characterizing these processes as complex, time-dependent phenomenon, otherwise only a fraction of the system dynamics will be recovered. In this paper we introduce a Square-Root Second-Order Extended Kalman Filtering approach for estimating smoothly time-varying parameters. This approach is capable of handling dynamic factor models where the relations between variables underlying the processes of interest change in a manner that may be difficult to specify in advance. We examine the performance of our approach in a Monte Carlo simulation and show the proposed algorithm accurately recovers the unobserved states in the case of a bivariate dynamic factor model with time-varying dynamics and treatment effects. Furthermore, we illustrate the utility of our approach in characterizing the time-varying effect of a meditation intervention on day-to-day emotional experiences.

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arXiv2020

An Instrumental Variable Estimator for Mixed Indicators: Analytic Derivatives and Alternative Parameterizations

Methodological development of the Model-implied Instrumental Variable (MIIV) estimation framework has proved fruitful over the last three decades. Major milestones include Bollen's (1996) original development of the MIIV estimator and its robustness properties for continuous endogenous variable SEMs, the extension of the MIIV estimator to ordered categorical endogenous variables (Bollen \& Maydeu-Olivares, 2007), and the introduction of a Generalized Method of Moments (GMM) estimator (Bollen, Kolenikov \& Bauldry, 2014). This paper furthers these developments by making several unique contributions not present in the prior literature: (1) we use matrix calculus to derive the analytic derivatives of the PIV estimator, (2) we extend the PIV estimator to apply to any mixture of binary, ordinal, and continuous variables, (3) we generalize the PIV model to include intercepts and means, (4) we devise a method to input known threshold values for ordinal observed variables, and (5) we enable a general parameterization that permits the estimation of means, variances, and covariances of the underlying variables to use as input into a SEM analysis with PIV. An empirical example illustrates a mixture of continuous variables and ordinal variables with fixed thresholds. We also include a simulation study to compare the performance of this novel estimator to WLSMV.

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