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Zachary Lubberts

Publications and source records attributed to Zachary Lubberts.

18 recordsLinked to original sources

Recovering manifold structure in LLM responses through a joint Euclidean mirror

Understanding the behavior of black-box large language models and determining effective means of comparing their performance is a key task in modern machine learning. We consider how large language models respond to a specific query by analyzing how the distributions of responses vary over different values of tuning parameters. We frame this problem in a general mathematical setting, treating the mapping from model parameters to response distributions as a structured family of probability measures, endowed with a geometry via a dissimilarity measure. We show how dissimilarities between response distributions can be represented in low-dimensional Euclidean space through a joint Euclidean mirror surface encoding the underlying geometry, which permits both qualitative and quantitative analysis of large language models and provides insight into predicting response distributions for different values of tuning parameters. We propose an estimation procedure for the underlying joint Euclidean mirror based on observed samples from the response distributions, and we prove its asymptotic properties. Additionally, we propose a statistically consistent procedure to infer the value of an unknown model parameter based on samples from the corresponding response distribution and the estimated joint Euclidean mirror. In an experimental setting with large language models, we find that changes in different tuning parameter values correspond to distinct directions in the embedding space, making it possible to estimate the tuning parameters that were used to generate a given response.

stat.ME

Vertex misalignment and changepoint localization in network time series

Inference for time series of networks often relies on accurate vertex correspondence between network realizations at different times. In practice, however, such vertex alignments can be misspecified or unknown. We study the impact of vertex alignment on changepoint localization for dynamic networks through two illustrative models, each with a similar changepoint, with the key distinction being whether changepoint information is contained in marginal or joint distributions of the time-varying latent positions. We compare localization techniques ranging from the simple network statistic of average degree to the modern procedure of Euclidean mirrors. In one model, vertex misalignment causes little error, and in the other, it impairs localization in ways that cannot be corrected through graph matching or optimal transport, which we show are closely related in this setting. Our results demonstrate that robust network inference necessitates reckoning with the subtle interplay of marginal and joint information in the observed network time series.

math.ST

Euclidean mirrors and first-order changepoints in network time series

We describe a model for a network time series whose evolution is governed by an underlying stochastic process, known as the latent position process, in which network evolution can be represented in Euclidean space by a curve, called the Euclidean mirror. We define the notion of a first-order changepoint for a time series of networks, and construct a family of latent position process networks with underlying first-order changepoints. We prove that a spectral estimate of the associated Euclidean mirror localizes these changepoints, even when the graph distribution evolves continuously, but at a rate that changes. Simulated and real data examples on organoid networks show that this localization captures empirically significant shifts in network evolution.

stat.ME

KRAFTY: Khatri-Rao Framework for Joint Cluster Recovery

When multiple datasets describe complementary information about the same set of entities, for example, brain scans of an individual over time, global trade network across years, or user information across social media platforms, integrating these snapshots allows us to see a more holistic picture. A common way of identifying structure in data is through clustering, but while clustering may be applied to each dataset separately, we learn more in the multi-view setting by identifying joint clusters. We consider a clustering problem where each view conflates some of these joint clusters, only revealing partial information, and seek to recover the true joint cluster structure. We introduce this multi-view clustering model and a method for recovering it: the transposed Khatri-RAo Framework for joinT cluster recoverY (KRAFTY). The model is flexible and can accommodate a variety of data-generating processes, including latent positions in random dot product graphs and Gaussian mixtures. A key advantage of KRAFTY is that it represents joint clusters in a space with sufficient dimension so that each joint cluster occupies an orthogonal subspace in the transposed Khatri-Rao matrix, which results in a sharp drop in the scree plot at the true number of joint clusters, enabling easy model selection. Our simulations show that when the number of joint clusters exceeds the sum of the numbers of clusters in each individual view, our method outperforms existing methods in both joint clustering accuracy and estimation of the number of joint clusters.

math.ST

Linking Warm Dark Matter to Merger Tree Histories via Deep Learning Networks

Dark matter (DM) halos form hierarchically in the Universe through a series of merger events. Cosmological simulations can represent this series of mergers as a graph-like ``tree'' structure. Previous work has shown these merger trees are sensitive to cosmology simulation parameters, but as DM structures, the outstanding question of their sensitivity to DM models remains unanswered. In this work, we investigate the feasibility of deep learning methods trained on merger trees to infer Warm Dark Matter (WDM) particles masses from the DREAMS simulation suite. We organize the merger trees from 1,024 zoom-in simulations into graphs with nodes representing the merger history of galaxies and edges denoting hereditary links. We vary the complexity of the node features included in the graphs ranging from a single node feature up through an array of several galactic properties (e.g., halo mass, star formation rate, etc.). We train a Graph Neural Network (GNN) to predict the WDM mass using the graph representation of the merger tree as input. We find that the GNN can predict the mass of the WDM particle ($R^2$ from 0.07 to 0.95), with success depending on the graph complexity and node features. We extend the same methods to supernovae and active galactic nuclei feedback parameters $A_\text{SN1}$, $A_\text{SN2}$, and $A_\text{AGN}$, successfully inferring the supernovae parameters. The GNN can even infer the WDM mass from merger tree histories without any node features, indicating that the structure of merger trees alone inherits information about the cosmological parameters of the simulations from which they form.

astro-ph.GA

Procrustes Problems on Random Matrices

Meaningful comparison between sets of observations often necessitates alignment or registration between them, and the resulting optimization problems range in complexity from those admitting simple closed-form solutions to those requiring advanced and novel techniques. We compare different Procrustes problems in which we align two sets of points after various perturbations by minimizing the norm of the difference between one matrix and an orthogonal transformation of the other. The minimization problem depends significantly on the choice of matrix norm; we highlight recent developments in nonsmooth Riemannian optimization and characterize which choices of norm work best for each perturbation. We show that in several applications, from low-dimensional alignments to hypothesis testing for random networks, when Procrustes alignment with the spectral or robust norm is the appropriate choice, it is often feasible to replace the computationally more expensive spectral and robust minimizers with their closed-form Frobenius-norm counterpart. Our work reinforces the synergy between optimization, geometry, and statistics.

stat.ME

Limiting distributions of ratios of Binomial random variables

We consider the limiting distribution of the quantity $X^s/(X+Y)^r$, where $X$ and $Y$ are two independent Binomial random variables with a common success probability and a number of trials $n$ and $m$, respectively, and $r,s$ are positive real numbers. Under several settings, we prove that this converges to a Normal distribution with a given mean and variance, and demonstrate these theoretical results through simulations.

math.ST

Joint Spectral Clustering in Multilayer Degree-Corrected Stochastic Blockmodels

Modern network datasets are often composed of multiple layers, either as different views, time-varying observations, or independent sample units, resulting in collections of networks over the same set of vertices but with potentially different connectivity patterns on each network. These data require models and methods that are flexible enough to capture local and global differences across the networks, while at the same time being parsimonious and tractable to yield computationally efficient and theoretically sound solutions that are capable of aggregating information across the networks. This paper considers the multilayer degree-corrected stochastic blockmodel, where a collection of networks share the same community structure, but degree-corrections and block connection probability matrices are permitted to be different. We establish the identifiability of this model and propose a spectral clustering algorithm for community detection in this setting. Our theoretical results demonstrate that the misclustering error rate of the algorithm improves exponentially with multiple network realizations, even in the presence of significant layer heterogeneity with respect to degree corrections, signal strength, and spectral properties of the block connection probability matrices. Simulation studies show that this approach improves on existing multilayer community detection methods in this challenging regime. Furthermore, in a case study of US airport data through January 2016 -- September 2021, we find that this methodology identifies meaningful community structure and trends in airport popularity influenced by pandemic impacts on travel.

math.ST

Perfect Clustering in Nonuniform Hypergraphs

While there has been tremendous activity in the area of statistical network inference on graphs, hypergraphs have not enjoyed the same attention, on account of their relative complexity and the lack of tractable statistical models. We introduce a hyper-edge-centric model for analyzing hypergraphs, called the interaction hypergraph, which models natural sampling methods for hypergraphs in neuroscience and communication networks, and accommodates interactions involving different numbers of entities. We define latent embeddings for the interactions in such a network, and analyze their estimators. In particular, we show that a spectral estimate of the interaction latent positions can achieve perfect clustering once enough interactions are observed.

stat.ME

Euclidean mirrors and dynamics in network time series

Analyzing changes in network evolution is central to statistical network inference, as underscored by recent challenges of predicting and distinguishing pandemic-induced transformations in organizational and communication networks. We consider a joint network model in which each node has an associated time-varying low-dimensional latent vector of feature data, and connection probabilities are functions of these vectors. Under mild assumptions, the time-varying evolution of the latent vectors exhibits low-dimensional manifold structure under a suitable notion of distance. This distance can be approximated by a measure of separation between the observed networks themselves, and there exist Euclidean representations for underlying network structure, as characterized by this distance, at any given time. These Euclidean representations, called Euclidean mirrors, permit the visualization of network evolution and transform network inference questions such as change-point and anomaly detection into a classical setting. We illustrate our methodology with real and synthetic data, and identify change points corresponding to massive shifts in pandemic policies in a communication network of a large organization.

stat.ME

Random line graphs and edge-attributed network inference

We extend the latent position random graph model to the line graph of a random graph, which is formed by creating a vertex for each edge in the original random graph, and connecting each pair of edges incident to a common vertex in the original graph. We prove concentration inequalities for the spectrum of a line graph, as well as limiting distribution results for the largest eigenvalue and the empirical spectral distribution in certain settings. For the stochastic blockmodel, we establish that although naive spectral decompositions can fail to extract necessary signal for edge clustering, there exist signal-preserving singular subspaces of the line graph that can be recovered through a carefully-chosen projection. Moreover, we can consistently estimate edge latent positions in a random line graph, even though such graphs are of a random size, typically have high rank, and possess no spectral gap. Our results demonstrate that the line graph of a stochastic block model exhibits underlying block structure, and in simulations, we synthesize and test our methods against several commonly-used techniques, including tensor decompositions, for cluster recovery and edge covariate inference. By naturally incorporating information encoded in both vertices and edges, the random line graph improves network inference.

cs.SI

Curvature-based Clustering on Graphs

Unsupervised node clustering (or community detection) is a classical graph learning task. In this paper, we study algorithms, which exploit the geometry of the graph to identify densely connected substructures, which form clusters or communities. Our method implements discrete Ricci curvatures and their associated geometric flows, under which the edge weights of the graph evolve to reveal its community structure. We consider several discrete curvature notions and analyze the utility of the resulting algorithms. In contrast to prior literature, we study not only single-membership community detection, where each node belongs to exactly one community, but also mixed-membership community detection, where communities may overlap. For the latter, we argue that it is beneficial to perform community detection on the line graph, i.e., the graph's dual. We provide both theoretical and empirical evidence for the utility of our curvature-based clustering algorithms. In addition, we give several results on the relationship between the curvature of a graph and that of its dual, which enable the efficient implementation of our proposed mixed-membership community detection approach and which may be of independent interest for curvature-based network analysis.

cs.SI

Discovering a change point and piecewise linear structure in a time series of organoid networks via the iso-mirror

Recent advancements have been made in the development of cell-based in-vitro neuronal networks, or organoids. In order to better understand the network structure of these organoids, a super-selective algorithm has been proposed for inferring the effective connectivity networks from multi-electrode array data. In this paper, we apply a novel statistical method called spectral mirror estimation to the time series of inferred effective connectivity organoid networks. This method produces a one-dimensional iso-mirror representation of the dynamics of the time series of the networks which exhibits a piecewise linear structure. A classical change point algorithm is then applied to this representation, which successfully detects a change point coinciding with the neuroscientifically significant time inhibitory neurons start appearing and the percentage of astrocytes increases dramatically. This finding demonstrates the potential utility of applying the iso-mirror dynamic structure discovery method to inferred effective connectivity time series of organoid networks.

stat.AP

Entrywise Estimation of Singular Vectors of Low-Rank Matrices with Heteroskedasticity and Dependence

We propose an estimator for the singular vectors of high-dimensional low-rank matrices corrupted by additive subgaussian noise, where the noise matrix is allowed to have dependence within rows and heteroskedasticity between them. We prove finite-sample $\ell_{2,\infty}$ bounds and a Berry-Esseen theorem for the individual entries of the estimator, and we apply these results to high-dimensional mixture models. Our Berry-Esseen theorem clearly shows the geometric relationship between the signal matrix, the covariance structure of the noise, and the distribution of the errors in the singular vector estimation task. These results are illustrated in numerical simulations. Unlike previous results of this type, which rely on assumptions of gaussianity or independence between the entries of the additive noise, handling the dependence between entries in the proofs of these results requires careful leave-one-out analysis and conditioning arguments. Our results depend only on the signal-to-noise ratio, the sample size, and the spectral properties of the signal matrix.

math.ST

Numerical tolerance for spectral decompositions of random matrices

We precisely quantify the impact of statistical error in the quality of a numerical approximation to a random matrix eigendecomposition, and under mild conditions, we use this to introduce an optimal numerical tolerance for residual error in spectral decompositions of random matrices. We demonstrate that terminating an eigendecomposition algorithm when the numerical error and statistical error are of the same order results in computational savings with no loss of accuracy. We also repair a flaw in a ubiquitous termination condition, one in wide employ in several computational linear algebra implementations. We illustrate the practical consequences of our stopping criterion with an analysis of simulated and real networks. Our theoretical results and real-data examples establish that the tradeoff between statistical and numerical error is of significant import for data science.

stat.CO

Multivariate Tight Wavelet Frames with Few Generators and High Vanishing Moments

Tight wavelet frames are computationally and theoretically attractive, but most existing multivariate constructions have various drawbacks, including low vanishing moments for the wavelets, or a large number of wavelet masks. We further develop existing work combining sums of squares representations with tight wavelet frame construction, and present a new and general method for constructing such frames. Focusing on the case of box splines, we also demonstrate how the flexibility of our approach can lead to tight wavelet frames with high numbers of vanishing moments for all of the wavelet masks, while still having few highpass masks: in fact, we match the best known upper bound on the number of highpass masks for general box spline tight wavelet frame constructions, while typically achieving much better vanishing moments for all of the wavelet masks, proving a nontrivial lower bound on this quantity.

math.FA

Concise Complexity Analyses for Trust-Region Methods

Concise complexity analyses are presented for simple trust region algorithms for solving unconstrained optimization problems. In contrast to a traditional trust region algorithm, the algorithms considered in this paper require certain control over the choice of trust region radius after any successful iteration. The analyses highlight the essential algorithm components required to obtain certain complexity bounds. In addition, a new update strategy for the trust region radius is proposed that offers a second-order complexity bound.

math.OC

Generalizations of the Maillet Determinant

We consider several extensions of the Maillet determinant studied by Malo, Turnbull, and Carlitz and Olson, and derive properties of the underlying matrices. In particular, we compute the eigenvectors and eigenvalues of these matrices, which yield formulas for these new determinants.

math.RA