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Zhe Lu

Publications and source records attributed to Zhe Lu.

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Verified residual-specific explicit derivative kernels for physics-informed learning and discretized PDE adjoints

Derivative computation is central to scientific computing, from space-time derivatives in physics-informed neural networks (PINNs) to residual Jacobian actions and discrete-adjoint operators in computational fluid dynamics (CFD). General-purpose automatic differentiation (AD) reduces implementation effort, but can incur substantial runtime and memory overhead for high-order residuals and complex discretized operators. Explicit derivative kernels can exploit problem-specific structure and provide efficient, controllable evaluations, but their use has been limited by derivation and implementation costs. This work revisits explicit differentiation (ED) as a residual-specific and verifiable route enabled by agent-assisted implementation and stringent numerical verification. For PINNs, we propose residual-specific partial-jet propagation, which makes the derivative-state closure of the target PDE residual explicit and realizes it through specialized layerwise kernels, rather than relying only on nested AD or a generic Taylor-mode transform. Relative to nested AD, the resulting ED kernels achieve floating-point-level agreement in residual and parameter-gradient evaluations and accelerate complete PINN training, often reaching 2-4x speedups while reducing peak GPU memory in most cases. For discretized PDE adjoints, we apply the same verification-driven strategy to a finite-volume CFD residual. The generated tangent-action and transpose-action kernels pass Taylor-remainder, inner-product, and reduced-gradient consistency checks, and are embedded into a GPU-resident discrete-adjoint workflow for freestream Mach-number and angle-of-attack inversion. These results suggest that verified explicit derivative kernels, supported by agent-assisted implementation, can serve as a practical, structure-aware complement to general-purpose AD for derivative-intensive scientific computing.

physics.comp-ph

DCO$^+$ and DCN 1-0 survey toward a sample of Planck cold clumps

Deuterated molecules can be used to study the physical conditions and the astro-chemical evolution of molecular clouds. large-sample surveys for deuterated molecules are needed to understand the enhancement of deuterated molecules from diffuse molecular gas to cold cores. A single-pointing survey toward the 559 Planck cold clumps of the Early Cold Core Catalogue (ECC) has been conducted using the Arizona Radio Observatory 12-meter telescope, focusing on the $J$=1-0 transitions of DCO$^+$ and DCN. The survey included observations of 309 cores for DCO$^+$ and DCN 1-0 simultaneously, followed by 71 of these cores where DCO$^+$ 1-0 was detected for H$^{13}$CO$^+$ and H$^{13}$CN 1-0 simultaneously, aiming to determine the deuterated fraction ($D_{\rm frac}$). Additionally, 250 cores were observed for DCO$^+$, DCN, H$^{13}$CO$^+$ and H$^{13}$CN 1-0 simultaneously. Among the 309 sources, DCO$^+$ and DCN 1-0 were detected in 79 and 11 sources, with a detection rates of 25.6 % and 3.6 % respectively. In the 250 sources observed for all four species, DCO$^+$, DCN, H$^{13}$CO$^+$ and H$^{13}$CN 1-0 were detected in 58, 9, 57 and 13 sources, with a detection rate of 23.2 %, 3.6 %, 22.8 % and 5.2 % respectively. The $D_{\rm frac}$(HCO$^+$) values in 112 sources range from 0.89 % to 7.4 % with a median value of 3.1 %, while $D_{\rm frac}$(HCN) values in 11 sources range from 1.5 % to 5.5 % with a median value of 2.3 %. The line widths of DCO$^+$ and H$^{13}$CO$^+$ 1-0 detections are mostly within 1 km s$^{-1}$. The similarity in $D_{\rm frac}$ values between HCO$^+$ and HCN indicates that the higher detection rate of DCO$^+$ 1-0 compared with DCN 1-0 is due to the lower critical density of DCO$^+$ 1-0. We suggest that the enhancement of DCO$^+$ and DCN likely begins in the early diffuse stage of the molecular cloud, rather than during the cold core formation stage.

astro-ph.GA

Spatial distribution of NH2D in massive star-forming regions

To understand the relation between NH$_2$D and its physical environment, we mapped ortho-NH$_2$D $1_{11}^s-1_{01}^a$ at 85.9 GHz toward 24 Galactic late-stage massive star-forming regions with Institut de Radioastronomie Millim$ \'e$trique (IRAM) 30-m telescope. Ortho-NH$_2$D $1_{11}^s-1_{01}^a$ was detected in 18 of 24 sources. Comparing with the distribution of H$^{13}$CN 1-0 as a dense gas tracer and radio recombination line H42$\alpha$, ortho-NH$_2$D $1_{11}^s-1_{01}^a$ present complex and diverse spatial distribution in these targets. 11 of the 18 targets, present a different distribution between ortho-NH$_2$D $1_{11}^s-1_{01}^a$ and H$^{13}$CN 1-0, while no significant difference between these two lines can be found in the other 7 sources, mainly due to limited spatial resolution and sensitivity. Moreover, with H42$\alpha$ tracing massive young stellar objects, ortho-NH$_2$D $1_{11}^s-1_{01}^a$ seems to show a relatively weak emission near the massive young stellar objects.

astro-ph.GA

A spatial-temporal short-term traffic flow prediction model based on dynamical-learning graph convolution mechanism

Short-term traffic flow prediction is a vital branch of the Intelligent Traffic System (ITS) and plays an important role in traffic management. Graph convolution network (GCN) is widely used in traffic prediction models to better deal with the graphical structure data of road networks. However, the influence weights among different road sections are usually distinct in real life, and hard to be manually analyzed. Traditional GCN mechanism, relying on manually-set adjacency matrix, is unable to dynamically learn such spatial pattern during the training. To deal with this drawback, this paper proposes a novel location graph convolutional network (Location-GCN). Location-GCN solves this problem by adding a new learnable matrix into the GCN mechanism, using the absolute value of this matrix to represent the distinct influence levels among different nodes. Then, long short-term memory (LSTM) is employed in the proposed traffic prediction model. Moreover, Trigonometric function encoding is used in this study to enable the short-term input sequence to convey the long-term periodical information. Ultimately, the proposed model is compared with the baseline models and evaluated on two real word traffic flow datasets. The results show our model is more accurate and robust on both datasets than other representative traffic prediction models.

cs.LG

Is the new model better? One metric says yes, but the other says no. Which metric do I use?

Incremental value (IncV) evaluates the performance change from an existing risk model to a new model. It is one of the key considerations in deciding whether a new risk model performs better than the existing one. Problems arise when different IncV metrics contradict each other. For example, compared with a prescribed-dose model, an ovarian-dose model for predicting acute ovarian failure has a slightly lower area under the receiver operating characteristic curve (AUC) but increases the area under the precision-recall curve (AP) by 48%. This phenomenon of conflicting conclusions is not uncommon, and it creates a dilemma in medical decision making. In this article, we examine the analytical connections and differences between two IncV metrics: IncV in AUC (IncV-AUC) and IncV in AP (IncV-AP). Additionally, since they are both semi-proper scoring rules, we compare them with a strictly proper scoring rule: the IncV of the scaled Brier score (IncV-sBrS), via a numerical study. We demonstrate that both IncV-AUC and IncV-AP are weighted averages of the changes (from the existing model to the new one) in separating the risk score distributions between events and non-events. However, IncV-AP assigns heavier weights to the changes in the high-risk group, whereas IncV-AUC weights the changes equally. In the numerical study, we find that IncV-AP has a wide range, from negative to positive, but the size of IncV-AUC is much smaller. In addition, IncV-AP and IncV-sBr Sare highly consistent, but IncV-AUC is negatively correlated with IncV-sBrS and IncV-AP at a low event rate. IncV-AUC and IncV-AP are the least consistent among the three pairs, and their differences are more pronounced as the event rate decreases.

stat.ME