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Zhen Xuen Brandon Low

Publications and source records attributed to Zhen Xuen Brandon Low.

2 recordsLinked to original sources

What Next-Event Accuracy Cannot See: Closed-Loop Evaluation of Emergency Department Trajectory Simulators

Clinical trajectory models are usually evaluated by next-event accuracy on observed histories. Simulation is different: models must condition on their own generated events, allowing errors to compound. Although this problem is well known in sequence modelling, it has not been systematically quantified for clinical trajectory simulators. We developed EDSim-Bench to evaluate this failure mode using 425,028 MIMIC-IV-ED stays, with external replication on MC-MED, and release the evaluation protocol and scoring code. Starting from held-out visit prefixes, models generate the remainder of each visit and are evaluated on termination, event composition, timing, conditional fidelity, and occupancy forecasting, with a train-only order-3 n-gram as a reference baseline. Despite next-event accuracies within 0.001, three neural architectures behaved very differently under rollout. Across seeds, one Transformer recipe ranged from 0.43 to 0.96 in termination score and from 4.2- to 137-fold the divergence of the n-gram; no prefix-trained neural model approached the n-gram on termination or event composition. Inference-time interventions improved termination but did not jointly recover composition and timing. Supervising every eligible sequence position rather than only the final prefix position was associated with one to two orders of magnitude lower divergence across Transformer, GRU, and LSTM models, with the pattern persisting under model scaling, temporal shift, and external-site evaluation. Nevertheless, even the best model generated visits approximately half as long as observed, and model rankings reversed on occupancy forecasting, a downstream quantity relevant to bed management. These results show that next-event accuracy is insufficient to evaluate clinical trajectory simulators and motivate closed-loop evaluation across seeds, rollout criteria, and downstream tasks.

cs.LG↗

MedNet-PVS: A MedNeXt-Based Deep Learning Model for Automated Segmentation of Perivascular Spaces

Enlarged perivascular spaces (PVS) are increasingly recognized as biomarkers of cerebral small vessel disease, Alzheimer's disease, stroke, and aging-related neurodegeneration. However, manual segmentation of PVS is time-consuming and subject to moderate inter-rater reliability, while existing automated deep learning models have moderate performance and typically fail to generalize across diverse clinical and research MRI datasets. We adapted MedNeXt-L-k5, a Transformer-inspired 3D encoder-decoder convolutional network, for automated PVS segmentation. Two models were trained: one using a homogeneous dataset of 200 T2-weighted (T2w) MRI scans from the Human Connectome Project-Aging (HCP-Aging) dataset and another using 40 heterogeneous T1-weighted (T1w) MRI volumes from seven studies across six scanners. Model performance was evaluated using internal 5-fold cross validation (5FCV) and leave-one-site-out cross validation (LOSOCV). MedNeXt-L-k5 models trained on the T2w images of the HCP-Aging dataset achieved voxel-level Dice scores of 0.88+/-0.06 (white matter, WM), comparable to the reported inter-rater reliability of that dataset, and the highest yet reported in the literature. The same models trained on the T1w images of the HCP-Aging dataset achieved a substantially lower Dice score of 0.58+/-0.09 (WM). Under LOSOCV, the model had voxel-level Dice scores of 0.38+/-0.16 (WM) and 0.35+/-0.12 (BG), and cluster-level Dice scores of 0.61+/-0.19 (WM) and 0.62+/-0.21 (BG). MedNeXt-L-k5 provides an efficient solution for automated PVS segmentation across diverse T1w and T2w MRI datasets. MedNeXt-L-k5 did not outperform the nnU-Net, indicating that the attention-based mechanisms present in transformer-inspired models to provide global context are not required for high accuracy in PVS segmentation.

cs.CV↗