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Zhi-Feng Huang

Publications and source records attributed to Zhi-Feng Huang.

At least 37 records · Page 2Linked to original sources

Nonautonomous Dynamics of Acute Cell Injury

Medical conditions due to acute cell injury, such as stroke and heart attack, are of tremendous impact and have attracted huge amounts of research effort. The biomedical research that seeks cures for these conditions has been dominated by a qualitative, inductive mindset. Although the inductive approach has not been effective in developing medical treatments, it has amassed enough information to allow construction of quantitative, deductive models of acute cell injury. In this work we develop a modeling approach by extending an autonomous nonlinear dynamic theory of acute cell injury that offered new ways to conceptualize cell injury but possessed limitations that decrease its effectiveness. Here we study the global dynamics of the cell injury theory using a nonautonomous formulation. Different from the standard scenario in nonlinear dynamics that is determined by the steady state and fixed points of the model equations, in this nonautonomous model with a trivial fixed point, the system property is dominated by the transient states and the corresponding dynamic processes. The model gives rise to four qualitative types of dynamical patterns that can be mapped to the behavior of cells after clinical acute injuries. The nonautonomous theory predicts the existence of a latent stress response capacity (LSRC) possessed by injured cells. The LSRC provides a theoretical explanation of how therapies, such as hypothermia, can prevent cell death after lethal injuries. The nonautonomous theory of acute cell injury provides an improved quantitative framework for understanding cell death and recovery and lays a foundation for developing effective therapeutics for acute injury.

q-bio.CB↗

Phase ordering, transformation, and grain growth of two-dimensional binary colloidal crystals: A phase field crystal modeling

The formation and dynamics of a wide variety of binary two-dimensional ordered structures and superlattices are investigated through a phase field crystal model with sublattice ordering. Various types of binary ordered phases, the phase diagrams, and the grain growth dynamics and structural transformation processes, including the emergence of topological defects, are examined. The results are compared to the ordering and assembly of two-component colloidal systems. Two factors governing the binary phase ordering are identified, the coupling and competition between the length scales of two sublattices and the selection of average particle densities of two components. The control and variation of these two factors lead to the prediction of various complex binary ordered patterns, with different types of sublattice ordering for integer vs. noninteger ratios of sublattice length scales. These findings will enable further systematic studies of complex ordering and assembly processes of binary systems particularly binary colloidal crystals.

cond-mat.soft↗

Mechanical relaxation and fracture of phase field crystals

A computational method is developed for the study of mechanical response and fracture behavior of phase field crystals (PFC), to overcome a limitation of the PFC dynamics which lacks an effective mechanism for describing fast mechanical relaxation of the material system. The method is based on a simple interpolation scheme for PFC (IPFC) making use of a condition of the displacement field to satisfy local elastic equilibration, while preserving key characteristics of the original PFC model. We conduct a systematic study on the mechanical properties of a sample nanoribbon system with honeycomb lattice symmetry subjected to uniaxial tension, for numerical validation of the IPFC scheme and the comparison with the original PFC and modified PFC methods. Results of mechanical response, in both elasticity and fracture regimes, show the advantage and efficiency of the IPFC method across different system sizes and applied strain rates, due to its effective process of mechanical equilibration. A brittle fracture behavior is obtained in IPFC calculations, where effects of system temperature and chirality on the fracture strength and Young's modulus are also identified, with results agreeing with those found in previous atomistic simulations of graphene. The IPFC scheme developed here is generic and applicable to the mechanical studies using different types of PFC free energy functionals designed for various material systems.

cond-mat.mtrl-sci↗

Angle-adjustable density field formulation for modeling crystalline microstructures

A continuum density-field formulation with particle-scale resolution is constructed to simultaneously incorporate the orientation dependence of interparticle interactions and the rotational invariance of the system, a fundamental but challenging issue in modeling structure and dynamics of a broad range of material systems across variable scales. This generalized phase field crystal type approach is based upon the complete expansion of particle direct correlation functions and the concept of isotropic tensors. Through applications to the modeling of various two- and three-dimensional crystalline structures, our study demonstrates the capability of bond angle control in this continuum field theory and its effects on the emergence of ordered phases, and provides a systematic way of tunable angle analysis for crystalline microstructures.

cond-mat.mtrl-sci↗

Elastic constants of stressed and unstressed materials in the phase field crystal model

A general procedure to investigate the elastic response and calculate the elastic constants of stressed and unstressed materials through continuum field modeling, particularly the phase field crystal (PFC) models, is presented. It is found that for a complete description of system response to elastic deformation, the variations of all the quantities of lattice wave vectors, their density amplitudes (including the corresponding anisotropic variation and degeneracy breaking), the average atomic density, and system volume should be incorporated. The quantitative and qualitative results of elastic constant calculations highly depend on the physical interpretation of the density field used in the model, and also importantly, on the intrinsic pressure that usually pre-exists in the model system. A formulation based on thermodynamics is constructed to account for the effects caused by constant pre-existing stress during the homogeneous elastic deformation, through the introducing of a generalized Gibbs free energy and an effective finite strain tensor used for determining the elastic constants. The elastic properties of both solid and liquid states can be well produced by this unified approach, as demonstrated by an analysis for the liquid state and numerical evaluations for the bcc solid phase. The numerical calculations of bcc elastic constants and Poisson's ratio through this method generate results that are consistent with experimental conditions, and better match the data of bcc Fe given by molecular dynamics simulations as compared to previous work. The general theory developed here is applicable to the study of different types of stressed or unstressed material systems under elastic deformation.

cond-mat.mtrl-sci↗

Grain Boundary Structures and Collective Dynamics of Inversion Domains in Binary Two-Dimensional Materials

Understanding and controlling the properties and dynamics of topological defects is a lasting challenge in the study of two-dimensional materials, and is crucial to achieve high-quality films required for technological applications. Here grain boundary structures, energies, and dynamics of binary two-dimensional materials are investigated through the development of a phase field crystal model that is parameterized to match the ordering, symmetry, energy and length scales of hexagonal boron nitride. Our studies reveal some new dislocation core structures for various symmetrically and asymmetrically tilted grain boundaries, in addition to those obtained in previous experiments and first-principles calculations. We also identify a defect-mediated growth dynamics for inversion domains governed by the collective atomic migration and defect core transformation at grain boundaries and junctions, a process that is related to inversion symmetry breaking in binary lattice.

cond-mat.mtrl-sci↗

Scaling of alloy interfacial properties under compositional strain

Complex morphologies and microstructures that emerge during materials growth and solidification are often determined by both equilibrium and kinetic properties of the interface and their crystalline anisotropies. However limited knowledge is available for the alloying and particularly the compositionally generated elastic effects on these interface characteristics. Here we systematically investigate such compositional effects on the interfacial properties of an alloy model system based on the phase-field-crystal analysis, including the solid-liquid interfacial free energy, kinetic coefficient, and lattice pinning strength. Scaling relations for these interfacial quantities over various ranges of material parameters are identified and predicted. Our results indicate the important effects of couplings among mesoscopic and microscopic length scales of alloy structure and concentration, and also the influence of compressive and tensile interface stresses induced by composition variations. The approach developed here provides an efficient way to systematically identify these key material properties beyond the traditional atomistic and continuum methods.

cond-mat.mtrl-sci↗

Complex order-parameter phase-field models derived from structural phase-field-crystal models

The phase-field-crystal (PFC) modeling paradigm is rapidly emerging as the model of choice when investigating materials phenomena with atomistic scale effects over diffusive time scales. Recent variants of the PFC model, so-called structural PFC (XPFC) models introduced by Greenwood et al., have further increased the capability of the method by allowing for easy access to various structural transformations in pure materials [Phys. Rev. Lett. 105, 045702 (2010)] and binary alloys [Phys. Rev. B. 84, 064104, (2011)]. We present an amplitude expansion of these XPFC models, leading to a mesoscale complex order-parameter (amplitude), i.e., phase-field representation, model for two dimensional square-triangular structures. Amplitude models retain the salient atomic scale features of the underlying PFC models, while resolving microstructures on mesoscales as in traditional phase-field models. The applicability and capability of this complex amplitude model is demonstrated with simulations of peritectic solidification and grain growth exhibiting the emergence of secondary phase structures.

cond-mat.mtrl-sci↗

Exploring the complex world of two-dimensional ordering with three modes

The world of two-dimensional crystals is of great significance for the design and study of structural and functional materials with novel properties. The world of two-dimensional crystals is of great significance for the design and study of structural and functional materials with novel properties. Here we examine the mechanisms governing the formation and dynamics of these crystalline or polycrystalline states and their elastic and plastic properties by constructing a generic multi-mode phase field crystal model. Our results demonstrate that a system with three competing length scales can order into all five Bravais lattices, and other more complex structures including honeycomb, kagome and other hybrid phases. In addition, non-equilibrium phase transitions are examined to illustrate the complex phase behavior described by the model. This model provides a systematic path to predict the influence of lattice symmetry on both structure and dynamics of crystalline and defected systems.

cond-mat.mtrl-sci↗

Scale coupling and interface pinning effects in the phase-field-crystal model

Effects of scale coupling between mesoscopic slowly-varying envelopes of liquid-solid profile and the underlying microscopic crystalline structure are studied in the phase-field-crystal (PFC) model. Such scale coupling leads to nonadiabatic corrections to the PFC amplitude equations, the effect of which increases strongly with decreasing system temperature below the melting point. This nonadiabatic amplitude representation is further coarse-grained for the derivation of effective sharp-interface equations of motion in the limit of small but finite interface thickness. We identify a generalized form of the Gibbs-Thomson relation with the incorporation of coupling and pinning effects of the crystalline lattice structure. This generalized interface equation can be reduced to the form of a driven sine-Gordon equation with KPZ nonlinearity, and be combined with other two dynamic equations in the sharp interface limit obeying the conservation condition of atomic number density in a liquid-solid system. A sample application to the study of crystal layer growth is given, and the corresponding analytic solutions showing lattice pinning and depinning effects and two distinct modes of continuous vs. nucleated growth are presented. We also identify the universal scaling behaviors governing the properties of pinning strength, surface tension, interface kinetic coefficient, and activation energy of atomic layer growth, which accommodate all range of liquid-solid interface thickness and different material elastic modulus.

cond-mat.mtrl-sci↗

Nonlinear effects for island coarsening and stabilization during strained film heteroepitaxy

Nonlinear evolution of three-dimensional strained islands or quantum dots in heteroepitaxial thin films is studied via a continuum elasticity model and the development of a nonlinear dynamic equation governing the film morphological profile. All three regimes of island array evolution are identified and examined, including a film instability regime at early stage, a nonlinear coarsening regime at intermediate times, and the crossover to a saturated asymptotic state, with detailed behavior depending on film-substrate misfit strains but not qualitatively on finite system sizes. The phenomenon of island stabilization and saturation, which corresponds to the formation of steady but non-ordered arrays of strained quantum dots, occurs at later time for smaller misfit strain. It is found to be controlled by the strength of film-substrate wetting interaction which would constrain the valley-to-peak mass transport and hence the growth of island height, and also determined by the effect of elastic interaction between surface islands and the high-order strain energy of individual islands at late evolution stage. The results are compared to previous experimental and theoretical studies on quantum dots coarsening and saturation.

cond-mat.mtrl-sci↗

Exploring Spiral Defect Chaos in Generalized Swift-Hohenberg Models with Mean Flow

We explore the phenomenon of spiral defect chaos in two types of generalized Swift-Hohenberg model equations that include the effects of long-range drift velocity or mean flow. We use spatially-extended domains and integrate the equations for very long times to study the pattern dynamics as the magnitude of the mean flow is varied. The magnitude of the mean flow is adjusted via a real and continuous parameter that accounts for the fluid boundary conditions on the horizontal surfaces in a convecting layer. For weak values of the mean flow we find that the patterns exhibit a slow coarsening to a state dominated by large and very slowly moving target defects. For strong enough mean flow we identify the existence of spatiotemporal chaos which is indicated by a positive leading order Lyapunov exponent. We compare the spatial features of the mean flow field with that of Rayleigh-Bénard convection and quantify their differences in the neighborhood of spiral defects.

nlin.CD↗

Double-percolation and magnetoresistance effects in ferromagnet-superconductor nanoparticle composites

We investigate transport and magnetotransport properties of binary networks composed of superconducting (MgB2) and ferromagnetic (CrO2 or LSMO) nanoparticles. While for the LSMO/MgB2 system a single percolation threshold is observed, for CrO2/MgB2 binary composites an anomalously high resistance state with two distinct percolation thresholds corresponding to conductor-insulator and superconductor-insulator transitions is found. The existence of this double percolation effect becomes possible when the interface conductance between the two different constituents is suppressed and the condition for the two thresholds PI + PII > 1 is satisfied. For MgB2 an unusually large value of the threshold is observed, which can be explained by the significant geometric disparity between nanoparticles of the two constituents, resulting in a large excluded volume for MgB2 nanoparticles. The scaling behavior near both thresholds is determined, with the two critical exponents identified: μ\approx 2.16 \pm 0.15 for the insulating-conducting transition on the CrO2 side and s = 1.37\pm 0.05 for the insulating - superconducting transition on the MgB2 side. We also measure the magnetoresistance for the entire series of CrO2/MgB2 samples, with a maximum of approximately 45% observed near the percolation threshold at liquid He temperatures.

cond-mat.str-el↗

Phase field crystal dynamics for binary systems: Derivation from dynamical density functional theory, amplitude equation formalism, and applications to alloy heterostructures

The dynamics of phase field crystal (PFC) modeling is derived from dynamical density functional theory (DDFT), for both single-component and binary systems. The derivation is based on a truncation up to the three-point direct correlation functions in DDFT, and the lowest order approximation using scale analysis. The complete amplitude equation formalism for binary PFC is developed to describe the coupled dynamics of slowly varying complex amplitudes of structural profile, zeroth-mode average atomic density, and system concentration field. Effects of noise (corresponding to stochastic amplitude equations) and species-dependent atomic mobilities are also incorporated in this formalism. Results of a sample application to the study of surface segregation and interface intermixing in alloy heterostructures and strained layer growth are presented, showing the effects of different atomic sizes and mobilities of alloy components. A phenomenon of composition overshooting at the interface is found, which can be connected to the surface segregation and enrichment of one of the atomic components observed in recent experiments of alloying heterostructures.

cond-mat.mtrl-sci↗

Morphological instability, evolution, and scaling in strained epitaxial films: An amplitude equation analysis of the phase field crystal model

Morphological properties of strained epitaxial films are examined through a mesoscopic approach developed to incorporate both the film crystalline structure and standard continuum theory. Film surface profiles and properties, such as surface energy, liquid-solid miscibility gap and interface thickness, are determined as a function of misfit strains and film elastic modulus. We analyze the stress-driven instability of film surface morphology that leads to the formation of strained islands. We find a universal scaling relationship between the island size and misfit strain which shows a crossover from the well-known continuum elasticity result at the weak strain to a behavior governed by a "perfect" lattice relaxation condition. The strain at which the crossover occurs is shown to be a function of liquid-solid interfacial thickness, and an asymmetry between tensile and compressive strains is observed. The film instability is found to be accompanied by mode coupling of the complex amplitudes of the surface morphological profile, a factor associated with the crystalline nature of the strained film but absent in conventional continuum theory.

cond-mat.mtrl-sci↗

Amplitude expansion of the binary phase field crystal model

Amplitude representations of a binary phase field crystal model are developed for a two dimensional triangular lattice and three dimensional BCC and FCC crystal structures. The relationship between these amplitude equations and the standard phase field models for binary alloy solidification with elasticity are derived, providing an explicit connection between phase field crystal and phase field models. Sample simulations of solute migration at grain boundaries, eutectic solidification and quantum dot formation on nano-membranes are also presented.

cond-mat.mtrl-sci↗

Double Percolation Transition in Superconductor/Ferromagnet Nanocomposites

A double percolation transition is identified in a binary network composed of nanoparticles of magnesium diborade superconductor and chromium oxide half-metallic ferromagnet. Anomalously high-resistance or insulating state, as compared to the conducting or superconducting states in single-component systems of either constituent, is observed between two distinct percolation thresholds. This double percolation effect, which is especially pronounced at liquid helium temperatures, is controlled by composite volume fraction and originates from the suppressed interface conduction and tunneling between nanoparticles of different species. We investigate the scaling behavior near both percolation thresholds, and determine the distinct critical exponents associated with two different types of transitions.

cond-mat.mes-hall↗

Stability analysis of twist grain boundaries in lamellar phases of block copolymers

Twist grain boundaries are widely observed in lamellar phases of block copolymers. A mesoscopic model of the copolymer is used to obtain stationary configurations that include a twist grain boundary, and to analyze their stability against long wavelength perturbations. The analysis presented is valid in the weak segregation regime, and includes direct numerical solution of the governing equations as well as a multiple scale analysis. We find that a twist boundary configuration with arbitrary misorientation angle can be well described by two modes, and obtain the equations for their slowly varying amplitudes. The width of the boundary region is seen to scale as $ε^{-1/4}$, with $ε$ being the dimensionless distance to the order-disorder transition. We finally present the results of the linear stability analysis of the planar boundary.

cond-mat.soft↗