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Zhiqiang Cheng

Publications and source records attributed to Zhiqiang Cheng.

4 recordsLinked to original sources

BRIGHT: A Collaborative Generalist-Specialist Foundation Model for Breast Pathology

Generalist pathology foundation models (PFMs), pretrained on large-scale multi-organ datasets, have demonstrated remarkable predictive capabilities across diverse clinical applications. However, their proficiency on the full spectrum of clinically essential tasks within a specific organ system remains an open question due to the lack of large-scale validation cohorts for a single organ as well as the absence of a tailored training paradigm that can effectively translate broad histomorphological knowledge into the organ-specific expertise required for specialist-level interpretation. In this study, we propose BRIGHT, the first PFM specifically designed for breast pathology, trained on over 51,000 breast whole-slide images derived from a cohort of over 40,000 patients across 19 hospitals. BRIGHT employs a collaborative generalist-specialist framework to capture both universal and organ-specific features. To comprehensively evaluate the performance of PFMs on breast oncology, we curate the largest multi-institutional cohorts to date for downstream task development and evaluation, comprising over 25,000 WSIs across 10 hospitals. The validation cohorts cover the full spectrum of breast pathology across 25 distinct clinical tasks spanning diagnosis, biomarker prediction, treatment response and survival prediction. Extensive experiments demonstrate that BRIGHT outperforms five leading generalist PFMs, achieving state-of-the-art (SOTA) performance in 25 of 25 internal validation tasks and in 4 of 11 external validation tasks with excellent heatmap interpretability. By evaluating on large-scale validation cohorts, this study not only demonstrates BRIGHT's clinical utility in breast oncology but also validates a collaborative generalist-specialist paradigm, providing a scalable template for developing PFMs on a specific organ system, accelerating the translation of foundation models into ...

cs.CV

Subspecialty-Specific Foundation Model for Intelligent Gastrointestinal Pathology

Gastrointestinal (GI) diseases represent a clinically significant burden, necessitating precise diagnostic approaches to optimize patient outcomes. Conventional histopathological diagnosis suffers from limited reproducibility and diagnostic variability. To overcome these limitations, we develop Digepath, a specialized foundation model for GI pathology. Our framework introduces a dual-phase iterative optimization strategy combining pretraining with fine-screening, specifically designed to address the detection of sparsely distributed lesion areas in whole-slide images. Digepath is pretrained on over 353 million multi-scale images from 210,043 H&E-stained slides of GI diseases. It attains state-of-the-art performance on 33 out of 34 tasks related to GI pathology, including pathological diagnosis, protein expression status prediction, gene mutation prediction, and prognosis evaluation. We further translate the intelligent screening module for early GI cancer and achieve near-perfect 99.70% sensitivity across nine independent medical institutions. This work not only advances AI-driven precision pathology for GI diseases but also bridge critical gaps in histopathological practice.

eess.IV

Cyclic and Negacyclic Sum-Rank Codes

Sum-rank codes have known applications in the multishot network coding, the distributed storage and the construction of space-time codes. U. Mart\'ınez-Peñas introduced the cyclic-skew-cyclic sum-rank codes and proposed the BCH bound on the cyclic-skew-cyclic sum-rank codes in his paper published in IEEE Trans. Inf. Theory, vol. 67, no. 8, 2021. Afterwards, many sum-rank BCH codes with lower bounds on their dimensions and minimum sum-rank distances were constructed. Sum-rank Hartmann-Tzeng bound and sum-rank Roos bound on cyclic-skew-cyclic codes were proposed and proved by G. N. Alfarano, F. J. Lobillo, A. Neri, and A. Wachter-Zeh in 2022. In this paper, cyclic, negacyclic and constacyclic sum-rank codes are introduced and a direct construction of cyclic, negacyclic and constacyclic sum-rank codes of the matrix size $m \times m$ from cyclic, negacyclic and constacyclic codes over ${\bf F}_{q^m}$ in the Hamming metric is proposed. The cyclic-skew-cylic sum-rank codes are special cyclic sum-rank codes. In addition, BCH and Hartmann-Tzeng bounds for a type of cyclic sum-rank codes are developed. Specific constructions of cyclic, negacyclic and constacyclic sum-rank codes with known dimensions and controllable minimum sum-rank distances are proposed. Moreover, many distance-optimal binary sum-rank codes and an infinite family of distance-optimal binary cyclic sum-rank codes with minimum sum-rank distance four are constructed. This is the first infinite family of distance-optimal sum-rank codes with minimum sum-rank distance four in the literature.

cs.IT

Construction and Fast Decoding of Binary Linear Sum-Rank-Metric Codes

Sum-rank-metric codes have wide applications in the multishot network coding and the distributed storage. Linearized Reed-Solomon codes, sum-rank BCH codes and their Welch-Berlekamp type decoding algorithms were proposed and studied. They are sum-rank versions of Reed-Solomon codes and BCH codes in the Hamming metric. In this paper, we construct binary linear sum-rank-metric codes of the matrix size $2 \times 2$, from BCH, Goppa and additive quaternary Hamming metric codes. Larger sum-rank-metric codes than these sum-rank BCH codes of the same minimum sum-rank distances are obtained. Then a reduction of the decoding in the sum-rank-metric to the decoding in the Hamming metric is given. Fast decoding algorithms of BCH and Goppa type binary linear sum-rank-metric codes of the block length $t$ and the matrix size $2 \times 2$, which are better than these sum-rank BCH codes, are presented. These fast decoding algorithms for BCH and Goppa type binary linear sum-rank-metric codes of the matrix size $2 \times 2$ need at most $O(t^2)$ operations in the field ${\bf F}_4$. Asymptotically good sequences of quadratic-time encodable and decodable binary linear sum-rank-metric codes of the matrix size $2 \times 2$ satisfying $$R_{sr}(δ_{sr}) \geq 1-\frac{1}{2}(H_4(\frac{4}{3}δ_{sr})+H_4(2δ_{sr})),$$ can be constructed from Goppa codes.

cs.IT