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Zhiyu Cao

Publications and source records attributed to Zhiyu Cao.

21 records · Page 2Linked to original sources

Effective Entropy Production and Thermodynamic Uncertainty Relation of Active Brownian Particles

Understanding stochastic thermodynamics of active Brownian particles (ABPs) system has been an important topic in very recent years. In this article we study a general model of active Brownian particle systems by introducing a coarse-grained Fokker-Planck equation, which allows us to identify an effective entropy production along a stochastic trajectory, wherein an activity and configuration dependent diffusion coefficient comes into play with an important role. Although the hidden component between the true entropy production and the effective one is dominant, the effective entropy production still act as a reliable measure to quantify the dynamical irreversibility, capturing important phenomenon such as the interface and defects of motility induced phase separation (MIPS). Furthermore, in this framework, we are able to obtain the entropic bound as well as TUR associated with any generalized currents in the systems. We expect the new conceptual quantities proposed here to be broadly used in the context of active matter.

cond-mat.stat-mech↗

Designing circle Swimmers: Principles and strategies

Various microswimmers move along circles rather than straight lines due to their swimming mechanisms, body shapes or hydrodynamic effects. Here, we adopt the concepts of stochastic thermodynamics to analyze circle swimmers confined in a two-dimensional plane, and study the trade-off relations between various physical quantities such as precision, energy cost and rotational speed. Based on these findings, we predict principles and strategies for designing microswimmers of special optimized functions under limited energy resource conditions, which will bring new experimental inspiration for designing smart motors.

cond-mat.soft↗

Design principles for biochemical oscillations with limited energy resources

As biochemical systems may frequently suffer from limited energy resources so that internal molecular fluctuation has to be utilized to induce random rhythm, it is still a great theoretical challenge to understand the elementary principles for biochemical systems with limited energy resources to maintain phase accuracy and phase sensitivity. Here, we address the issue by deriving the energy accuracy and the sensitivity-accuracy trade-off relations for a general biochemical model, analytically and numerically. We find that, biochemical systems consume much lower energy cost by noise-induced oscillations to keep almost equal efficiency to maintain precise processes than that by normal oscillations, elucidating clearly the survival mechanism when energy resources are limited. Moreover, an optimal system size is predicted where both the highest sensitivity and accuracy can be reached at the same time, providing a new strategy for the design of biological networks with limited energy sources.

physics.chem-ph↗