arXiv subjects

Zhongchao Shi

Publications and source records attributed to Zhongchao Shi.

24 records · Page 2Linked to original sources

arXiv2021

Does Non-COVID19 Lung Lesion Help? Investigating Transferability in COVID-19 CT Image Segmentation

Coronavirus disease 2019 (COVID-19) is a highly contagious virus spreading all around the world. Deep learning has been adopted as an effective technique to aid COVID-19 detection and segmentation from computed tomography (CT) images. The major challenge lies in the inadequate public COVID-19 datasets. Recently, transfer learning has become a widely used technique that leverages the knowledge gained while solving one problem and applying it to a different but related problem. However, it remains unclear whether various non-COVID19 lung lesions could contribute to segmenting COVID-19 infection areas and how to better conduct this transfer procedure. This paper provides a way to understand the transferability of non-COVID19 lung lesions. Based on a publicly available COVID-19 CT dataset and three public non-COVID19 datasets, we evaluate four transfer learning methods using 3D U-Net as a standard encoder-decoder method. The results reveal the benefits of transferring knowledge from non-COVID19 lung lesions, and learning from multiple lung lesion datasets can extract more general features, leading to accurate and robust pre-trained models. We further show the capability of the encoder to learn feature representations of lung lesions, which improves segmentation accuracy and facilitates training convergence. In addition, our proposed Hybrid-encoder learning method incorporates transferred lung lesion features from non-COVID19 datasets effectively and achieves significant improvement. These findings promote new insights into transfer learning for COVID-19 CT image segmentation, which can also be further generalized to other medical tasks.

eess.IV↗

arXiv2020

Double-Uncertainty Weighted Method for Semi-supervised Learning

Though deep learning has achieved advanced performance recently, it remains a challenging task in the field of medical imaging, as obtaining reliable labeled training data is time-consuming and expensive. In this paper, we propose a double-uncertainty weighted method for semi-supervised segmentation based on the teacher-student model. The teacher model provides guidance for the student model by penalizing their inconsistent prediction on both labeled and unlabeled data. We train the teacher model using Bayesian deep learning to obtain double-uncertainty, i.e. segmentation uncertainty and feature uncertainty. It is the first to extend segmentation uncertainty estimation to feature uncertainty, which reveals the capability to capture information among channels. A learnable uncertainty consistency loss is designed for the unsupervised learning process in an interactive manner between prediction and uncertainty. With no ground-truth for supervision, it can still incentivize more accurate teacher's predictions and facilitate the model to reduce uncertain estimations. Furthermore, our proposed double-uncertainty serves as a weight on each inconsistency penalty to balance and harmonize supervised and unsupervised training processes. We validate the proposed feature uncertainty and loss function through qualitative and quantitative analyses. Experimental results show that our method outperforms the state-of-the-art uncertainty-based semi-supervised methods on two public medical datasets.

cs.CV↗

arXiv2020

Disentangled Neural Architecture Search

Neural architecture search has shown its great potential in various areas recently. However, existing methods rely heavily on a black-box controller to search architectures, which suffers from the serious problem of lacking interpretability. In this paper, we propose disentangled neural architecture search (DNAS) which disentangles the hidden representation of the controller into semantically meaningful concepts, making the neural architecture search process interpretable. Based on systematical study, we discover the correlation between network architecture and its performance, and propose a dense-sampling strategy to conduct a targeted search in promising regions that may generate well-performing architectures. We show that: 1) DNAS successfully disentangles the architecture representations, including operation selection, skip connections, and number of layers. 2) Benefiting from interpretability, DNAS can find excellent architectures under different FLOPS restrictions flexibly. 3) Dense-sampling leads to neural architecture search with higher efficiency and better performance. On the NASBench-101 dataset, DNAS achieves state-of-the-art performance of 94.21% using less than 1/13 computational cost of baseline methods. On ImageNet dataset, DNAS discovers the competitive architectures that achieves 22.7% test error. our method provides a new perspective of understanding neural architecture search.

cs.LG↗

arXiv2020

Challenge Closed-book Science Exam: A Meta-learning Based Question Answering System

Prior work in standardized science exams requires support from large text corpus, such as targeted science corpus fromWikipedia or SimpleWikipedia. However, retrieving knowledge from the large corpus is time-consuming and questions embedded in complex semantic representation may interfere with retrieval. Inspired by the dual process theory in cognitive science, we propose a MetaQA framework, where system 1 is an intuitive meta-classifier and system 2 is a reasoning module. Specifically, our method based on meta-learning method and large language model BERT, which can efficiently solve science problems by learning from related example questions without relying on external knowledge bases. We evaluate our method on AI2 Reasoning Challenge (ARC), and the experimental results show that meta-classifier yields considerable classification performance on emerging question types. The information provided by meta-classifier significantly improves the accuracy of reasoning module from 46.6% to 64.2%, which has a competitive advantage over retrieval-based QA methods.

cs.AI↗

arXiv2019

Facial Motion Prior Networks for Facial Expression Recognition

Deep learning based facial expression recognition (FER) has received a lot of attention in the past few years. Most of the existing deep learning based FER methods do not consider domain knowledge well, which thereby fail to extract representative features. In this work, we propose a novel FER framework, named Facial Motion Prior Networks (FMPN). Particularly, we introduce an addition branch to generate a facial mask so as to focus on facial muscle moving regions. To guide the facial mask learning, we propose to incorporate prior domain knowledge by using the average differences between neutral faces and the corresponding expressive faces as the training guidance. Extensive experiments on three facial expression benchmark datasets demonstrate the effectiveness of the proposed method, compared with the state-of-the-art approaches.

cs.CV↗

arXiv2019

Semantic Feature Attention Network for Liver Tumor Segmentation in Large-scale CT database

Liver tumor segmentation plays an important role in hepatocellular carcinoma diagnosis and surgical planning. In this paper, we propose a novel Semantic Feature Attention Network (SFAN) for liver tumor segmentation from Computed Tomography (CT) volumes, which exploits the impact of both low-level and high-level features. In the SFAN, a Semantic Attention Transmission (SAT) module is designed to select discriminative low-level localization details with the guidance of neighboring high-level semantic information. Furthermore, a Global Context Attention (GCA) module is proposed to effectively fuse the multi-level features with the guidance of global context. Our experiments are based on 2 challenging databases, the public Liver Tumor Segmentation (LiTS) Challenge database and a large-scale in-house clinical database with 912 CT volumes. Experimental results show that our proposed framework can not only achieve the state-of-the-art performance with the Dice per case on liver tumor segmentation in LiTS database, but also outperform some widely used segmentation algorithms in the large-scale clinical database.

eess.IV↗