arXiv subjects

Zubair Shah

Publications and source records attributed to Zubair Shah.

25 records · Page 2Linked to original sources

arXiv2022

Spot the fake lungs: Generating Synthetic Medical Images using Neural Diffusion Models

Generative models are becoming popular for the synthesis of medical images. Recently, neural diffusion models have demonstrated the potential to generate photo-realistic images of objects. However, their potential to generate medical images is not explored yet. In this work, we explore the possibilities of synthesis of medical images using neural diffusion models. First, we use a pre-trained DALLE2 model to generate lungs X-Ray and CT images from an input text prompt. Second, we train a stable diffusion model with 3165 X-Ray images and generate synthetic images. We evaluate the synthetic image data through a qualitative analysis where two independent radiologists label randomly chosen samples from the generated data as real, fake, or unsure. Results demonstrate that images generated with the diffusion model can translate characteristics that are otherwise very specific to certain medical conditions in chest X-Ray or CT images. Careful tuning of the model can be very promising. To the best of our knowledge, this is the first attempt to generate lungs X-Ray and CT images using neural diffusion models. This work aims to introduce a new dimension in artificial intelligence for medical imaging. Given that this is a new topic, the paper will serve as an introduction and motivation for the research community to explore the potential of diffusion models for medical image synthesis. We have released the synthetic images on https://www.kaggle.com/datasets/hazrat/awesomelungs.

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arXiv2022

Artificial Intelligence-Based Methods for Fusion of Electronic Health Records and Imaging Data

Healthcare data are inherently multimodal, including electronic health records (EHR), medical images, and multi-omics data. Combining these multimodal data sources contributes to a better understanding of human health and provides optimal personalized healthcare. Advances in artificial intelligence (AI) technologies, particularly machine learning (ML), enable the fusion of these different data modalities to provide multimodal insights. To this end, in this scoping review, we focus on synthesizing and analyzing the literature that uses AI techniques to fuse multimodal medical data for different clinical applications. More specifically, we focus on studies that only fused EHR with medical imaging data to develop various AI methods for clinical applications. We present a comprehensive analysis of the various fusion strategies, the diseases and clinical outcomes for which multimodal fusion was used, the ML algorithms used to perform multimodal fusion for each clinical application, and the available multimodal medical datasets. We followed the PRISMA-ScR guidelines. We searched Embase, PubMed, Scopus, and Google Scholar to retrieve relevant studies. We extracted data from 34 studies that fulfilled the inclusion criteria. In our analysis, a typical workflow was observed: feeding raw data, fusing different data modalities by applying conventional machine learning (ML) or deep learning (DL) algorithms, and finally, evaluating the multimodal fusion through clinical outcome predictions. Specifically, early fusion was the most used technique in most applications for multimodal learning (22 out of 34 studies). We found that multimodality fusion models outperformed traditional single-modality models for the same task. Disease diagnosis and prediction were the most common clinical outcomes (reported in 20 and 10 studies, respectively) from a clinical outcome perspective.

cs.LG↗

arXiv2022

Influences of social media usage on public attitudes and behavior towards COVID-19 vaccine in the Arab world

Background: Vaccination programs are effective only when a significant percentage of people are vaccinated. However, vaccine acceptance varies among communities around the world. Social media usage is arguably one of the factors affecting public attitudes towards vaccines. Objective: This study aims to identify if the social media usages factors can be used to predict attitudes and behavior towards the COVID-19 vaccines among the people in the Arab world. Methods: An online survey was conducted in the Arab countries and 217 Arab people participated in this study. Logistic regression was applied to identify what demographics and social media usage factors predict public attitudes and behavior towards the COVID-19 vaccines. Results: Of the 217 participants, 56.22% of them were willing to accept the vaccine and 41.47% of them were hesitant. This study shows that none of the social media usages factors were significant enough to predict the actual vaccine acceptance behavior. Whereas the analysis showed few of the social media usage factors can predict public attitudes towards the COVID-19 vaccines. For example, frequent social media users were 2.85 times more likely to agree that the risk of COVID-19 is being exaggerated (OR=2.85, 95% CI=0.86-9.45, p=0.046) than infrequent social media users. Whereas participants having more trust in vaccine information shared by their contacts are less likely to agree that decision-makers have verified that vaccines are safe (OR=0.528, 95% CI= 0.276-1.012, p=0.05). Conclusion: The use of social media and information shared on it may affect public attitudes towards COVID-19 vaccines. Therefore, disseminating correct and validated information about COVID-19 and other vaccines on social media is important for increasing public trust and countering the impact of incorrect and misinformation.

cs.SI↗

arXiv2022

Combating COVID-19 using Generative Adversarial Networks and Artificial Intelligence for Medical Images: A Scoping Review

This review presents a comprehensive study on the role of GANs in addressing the challenges related to COVID-19 data scarcity and diagnosis. It is the first review that summarizes the different GANs methods and the lungs images datasets for COVID-19. It attempts to answer the questions related to applications of GANs, popular GAN architectures, frequently used image modalities, and the availability of source code. This review included 57 full-text studies that reported the use of GANs for different applications in COVID-19 lungs images data. Most of the studies (n=42) used GANs for data augmentation to enhance the performance of AI techniques for COVID-19 diagnosis. Other popular applications of GANs were segmentation of lungs and super-resolution of the lungs images. The cycleGAN and the conditional GAN were the most commonly used architectures used in nine studies each. 29 studies used chest X-Ray images while 21 studies used CT images for the training of GANs. For majority of the studies (n=47), the experiments were done and results were reported using publicly available data. A secondary evaluation of the results by radiologists/clinicians was reported by only two studies. Conclusion: Studies have shown that GANs have great potential to address the data scarcity challenge for lungs images of COVID-19. Data synthesized with GANs have been helpful to improve the training of the Convolutional Neural Network (CNN) models trained for the diagnosis of COVID-19. Besides, GANs have also contributed to enhancing the CNNs performance through the super-resolution of the images and segmentation. This review also identified key limitations of the potential transformation of GANs based methods in clinical applications.

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arXiv2021

Automatically applying a credibility appraisal tool to track vaccination-related communications shared on social media

Background: Tools used to appraise the credibility of health information are time-consuming to apply and require context-specific expertise, limiting their use for quickly identifying and mitigating the spread of misinformation as it emerges. Our aim was to estimate the proportion of vaccination-related posts on Twitter are likely to be misinformation, and how unevenly exposure to misinformation was distributed among Twitter users. Methods: Sampling from 144,878 vaccination-related web pages shared on Twitter between January 2017 and March 2018, we used a seven-point checklist adapted from two validated tools to appraise the credibility of a small subset of 474. These were used to train several classifiers (random forest, support vector machines, and a recurrent neural network with transfer learning), using the text from a web page to predict whether the information satisfies each of the seven criteria. Results: Applying the best performing classifier to the 144,878 web pages, we found that 14.4% of relevant posts to text-based communications were linked to webpages of low credibility and made up 9.2% of all potential vaccination-related exposures. However, the 100 most popular links to misinformation were potentially seen by between 2 million and 80 million Twitter users, and for a substantial sub-population of Twitter users engaging with vaccination-related information, links to misinformation appear to dominate the vaccination-related information to which they were exposed. Conclusions: We proposed a new method for automatically appraising the credibility of webpages based on a combination of validated checklist tools. The results suggest that an automatic credibility appraisal tool can be used to find populations at higher risk of exposure to misinformation or applied proactively to add friction to the sharing of low credibility vaccination information.

cs.SI↗

arXiv2021

Contact Tracing Apps for COVID-19: Access Permission and User Adoption

Contact tracing apps are powerful software tools that can help control the spread of COVID-19. In this article, we evaluated 53 COVID-19 contact tracing apps found on the Google Play Store in terms of their usage, rating, access permission, and user privacy. For each app included in the study, we identified the country of origin, number of downloads, and access permissions to further understand the attributes and ratings of the apps. Our results show that contact tracing apps had low overall ratings and nearly 40% of the included apps were requesting dangerous access permission including access to storage, media files, and camera permissions. We also found that user adoption rates were inversely correlated to access permission requirements. To the best of our knowledge, our article summarizes the most extensive collection of contact tracing apps for COVID-19. We recommend that future contact tracing apps should be more transparent in permission requirements and should provide justification for permissions requested to preserve the app users privacy.

cs.SE↗

arXiv2019

Modeling Spatiotemporal Factors Associated With Sentiment on Twitter: Synthesis and Suggestions for Improving the Identification of Localized Deviations

Background: Studies examining how sentiment on social media varies depending on timing and location appear to produce inconsistent results, making it hard to design systems that use sentiment to detect localized events for public health applications. Objective: The aim of this study was to measure how common timing and location confounders explain variation in sentiment on Twitter. Methods: Using a dataset of 16.54 million English-language tweets from 100 cities posted between July 13 and November 30, 2017, we estimated the positive and negative sentiment for each of the cities using a dictionary-based sentiment analysis and constructed models to explain the differences in sentiment using time of day, day of week, weather, city, and interaction type (conversations or broadcasting) as factors and found that all factors were independently associated with sentiment. Results: In the full multivariable model of positive (Pearson r in test data 0.236; 95\% CI 0.231-0.241) and negative (Pearson r in test data 0.306; 95\% CI 0.301-0.310) sentiment, the city and time of day explained more of the variance than weather and day of week. Models that account for these confounders produce a different distribution and ranking of important events compared with models that do not account for these confounders. Conclusions: In public health applications that aim to detect localized events by aggregating sentiment across populations of Twitter users, it is worthwhile accounting for baseline differences before looking for unexpected changes.

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