arXiv subjects

Zuopeng Tan

Publications and source records attributed to Zuopeng Tan.

4 recordsLinked to original sources

arXiv2025

Digital Contrast CT Pulmonary Angiography Synthesis from Non-contrast CT for Pulmonary Vascular Disease

Computed Tomography Pulmonary Angiography (CTPA) is the reference standard for diagnosing pulmonary vascular diseases such as Pulmonary Embolism (PE) and Chronic Thromboembolic Pulmonary Hypertension (CTEPH). However, its reliance on iodinated contrast agents poses risks including nephrotoxicity and allergic reactions, particularly in high-risk patients. This study proposes a method to generate Digital Contrast CTPA (DCCTPA) from Non-Contrast CT (NCCT) scans using a cascaded synthesizer based on Cycle-Consistent Generative Adversarial Networks (CycleGAN). Totally retrospective 410 paired CTPA and NCCT scans were obtained from three centers. The model was trained and validated internally on 249 paired images. Extra dataset that comprising 161 paired images was as test set for model generalization evaluation and downstream clinical tasks validation. Compared with state-of-the-art (SOTA) methods, the proposed method achieved the best comprehensive performance by evaluating quantitative metrics (For validation, MAE: 156.28, PSNR: 20.71 and SSIM: 0.98; For test, MAE: 165.12, PSNR: 20.27 and SSIM: 0.98) and qualitative visualization, demonstrating valid vessel enhancement, superior image fidelity and structural preservation. The approach was further applied to downstream tasks of pulmonary vessel segmentation and vascular quantification. On the test set, the average Dice, clDice, and clRecall of artery and vein pulmonary segmentation was 0.70, 0.71, 0.73 and 0.70, 0.72, 0.75 respectively, all markedly improved compared with NCCT inputs.\@ Inter-class Correlation Coefficient (ICC) for vessel volume between DCCTPA and CTPA was significantly better than that between NCCT and CTPA (Average ICC : 0.81 vs 0.70), indicating effective vascular enhancement in DCCTPA, especially for small vessels.

cs.CV↗

arXiv2025

Learn2Reg 2024: New Benchmark Datasets Driving Progress on New Challenges

Medical image registration is critical for clinical applications, and fair benchmarking of different methods is essential for monitoring ongoing progress in the field. To date, the Learn2Reg 2020-2023 challenges have released several complementary datasets and established metrics for evaluations. Building on this foundation, the 2024 edition expands the challenge's scope to cover a wider range of registration scenarios, particularly in terms of modality diversity and task complexity, by introducing three new tasks, including large-scale multi-modal registration and unsupervised inter-subject brain registration, as well as the first microscopy-focused benchmark within Learn2Reg. The new datasets also inspired new method developments, including invertibility constraints, pyramid features, keypoints alignment and instance optimisation. Visit Learn2Reg at https://learn2reg.grand-challenge.org.

eess.IV↗

arXiv2025

Beyond the LUMIR challenge: The pathway to foundational registration models

Medical image challenges have played a transformative role in advancing the field, catalyzing innovation and establishing new performance benchmarks. Image registration, a foundational task in neuroimaging, has similarly advanced through the Learn2Reg initiative. Building on this, we introduce the Large-scale Unsupervised Brain MRI Image Registration (LUMIR) challenge, a next-generation benchmark for unsupervised brain MRI registration. Previous challenges relied upon anatomical label maps, however LUMIR provides 4,014 unlabeled T1-weighted MRIs for training, encouraging biologically plausible deformation modeling through self-supervision. Evaluation includes 590 in-domain test subjects and extensive zero-shot tasks across disease populations, imaging protocols, and species. Deep learning methods consistently achieved state-of-the-art performance and produced anatomically plausible, diffeomorphic deformation fields. They outperformed several leading optimization-based methods and remained robust to most domain shifts. These findings highlight the growing maturity of deep learning in neuroimaging registration and its potential to serve as a foundation model for general-purpose medical image registration.

eess.IV↗

arXiv2025

Bronchovascular Tree-Guided Weakly Supervised Learning Method for Pulmonary Segment Segmentation

Pulmonary segment segmentation is crucial for cancer localization and surgical planning. However, the pixel-wise annotation of pulmonary segments is laborious, as the boundaries between segments are indistinguishable in medical images. To this end, we propose a weakly supervised learning (WSL) method, termed Anatomy-Hierarchy Supervised Learning (AHSL), which consults the precise clinical anatomical definition of pulmonary segments to perform pulmonary segment segmentation. Since pulmonary segments reside within the lobes and are determined by the bronchovascular tree, i.e., artery, airway and vein, the design of the loss function is founded on two principles. First, segment-level labels are utilized to directly supervise the output of the pulmonary segments, ensuring that they accurately encompass the appropriate bronchovascular tree. Second, lobe-level supervision indirectly oversees the pulmonary segment, ensuring their inclusion within the corresponding lobe. Besides, we introduce a two-stage segmentation strategy that incorporates bronchovascular priori information. Furthermore, a consistency loss is proposed to enhance the smoothness of segment boundaries, along with an evaluation metric designed to measure the smoothness of pulmonary segment boundaries. Visual inspection and evaluation metrics from experiments conducted on a private dataset demonstrate the effectiveness of our method.

eess.IV↗