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arXiv2026

Logarithmic Mathematical Morphology: Theory and applications

In Mathematical Morphology for grey-level functions, an image is analysed by another image named the structuring function. This structuring function is translated over the image domain and summed to the image. However, in an image presenting lighting variations, when the structuring function is added to this image, the amplitude of this translated structuring function should vary according to the image intensity. Such a property is not verified in Mathematical Morphology for grey level functions, when the structuring function is summed to the image with the usual additive law. This issue has been addressed by defining a framework that uses an additive law, for which the amplitude of the structuring function added to the image varies according to the amplitude of the image itself. This additive law is chosen within the Logarithmic Image Processing framework and models the lighting variations with a physical cause such as a change of light intensity. The framework is named Logarithmic Mathematical Morphology (LMM) and allows the definition of operators which are robust to such lighting variations.

eess.IV↗

arXiv2013

Discriminative extended canonical correlation analysis for pattern set matching

In this paper we address the problem of matching sets of vectors embedded in the same input space. We propose an approach which is motivated by canonical correlation analysis (CCA), a statistical technique which has proven successful in a wide variety of pattern recognition problems. Like CCA when applied to the matching of sets, our extended canonical correlation analysis (E-CCA) aims to extract the most similar modes of variability within two sets. Our first major contribution is the formulation of a principled framework for robust inference of such modes from data in the presence of uncertainty associated with noise and sampling randomness. E-CCA retains the efficiency and closed form computability of CCA, but unlike it, does not possess free parameters which cannot be inferred directly from data (inherent data dimensionality, and the number of canonical correlations used for set similarity computation). Our second major contribution is to show that in contrast to CCA, E-CCA is readily adapted to match sets in a discriminative learning scheme which we call discriminative extended canonical correlation analysis (DE-CCA). Theoretical contributions of this paper are followed by an empirical evaluation of its premises on the task of face recognition from sets of rasterized appearance images. The results demonstrate that our approach, E-CCA, already outperforms both CCA and its quasi-discriminative counterpart constrained CCA (C-CCA), for all values of their free parameters. An even greater improvement is achieved with the discriminative variant, DE-CCA.

cs.CV↗

arXiv2024

MiniGPT-Pancreas: Multimodal Large Language Model for Pancreas Cancer Classification and Detection

Problem: Pancreas radiological imaging is challenging due to the small size, blurred boundaries, and variability of shape and position of the organ among patients. Goal: In this work we present MiniGPT-Pancreas, a Multimodal Large Language Model (MLLM), as an interactive chatbot to support clinicians in pancreas cancer diagnosis by integrating visual and textual information. Methods: MiniGPT-v2, a general-purpose MLLM, was fine-tuned in a cascaded way for pancreas detection, tumor classification, and tumor detection with multimodal prompts combining questions and computed tomography scans from the National Institute of Health (NIH), and Medical Segmentation Decathlon (MSD) datasets. The AbdomenCT-1k dataset was used to detect the liver, spleen, kidney, and pancreas. Results: MiniGPT-Pancreas achieved an Intersection over Union (IoU) of 0.595 and 0.550 for the detection of pancreas on NIH and MSD datasets, respectively. For the pancreas cancer classification task on the MSD dataset, accuracy, precision, and recall were 0.876, 0.874, and 0.878, respectively. When evaluating MiniGPT-Pancreas on the AbdomenCT-1k dataset for multi-organ detection, the IoU was 0.8399 for the liver, 0.722 for the kidney, 0.705 for the spleen, and 0.497 for the pancreas. For the pancreas tumor detection task, the IoU score was 0.168 on the MSD dataset. Conclusions: MiniGPT-Pancreas represents a promising solution to support clinicians in the classification of pancreas images with pancreas tumors. Future research is needed to improve the score on the detection task, especially for pancreas tumors.

cs.CV↗

arXiv2010

Characterizing Complex Particle Morphologies Through Shape Matching: Descriptors, Applications, and Algorithms

Many standard structural quantities, such as order parameters and correlation functions, exist for common condensed matter systems, such as spherical and rod-like particles. However, these structural quantities are often insufficient for characterizing the unique and highly complex structures often encountered in the emerging field of nano and microscale self-assembly, or other disciplines involving complex structures such as computational biology. Computer science algorithms known as "shape matching" methods pose a unique solution to this problem by providing robust metrics for quantifying the similarity between pairs of arbitrarily complex structures. This pairwise matching operation, either implicitly or explicitly, lies at the heart of most standard structural characterization schemes for particle systems. By substituting more robust "shape descriptors" into these schemes we extend their applicability to structures formed from more complex building blocks. Here, we describe several structural characterization schemes and shape descriptors that can be used to obtain various types of structural information about particle systems. We demonstrate the application of shape matching algorithms to a variety of example problems, for topics including local and global structure identification and classification, automated phase diagram mapping, and the construction of spatial and temporal correlation functions. The methods are applicable to a wide range of systems, both simulated and experimental, provided particle positions are known or can be accurately imaged.

cond-mat.soft↗

arXiv2025

Semi-Supervised Multi-Task Learning for Interpretable Quality As- sessment of Fundus Images

Retinal image quality assessment (RIQA) supports computer-aided diagnosis of eye diseases. However, most tools classify only overall image quality, without indicating acquisition defects to guide recapture. This gap is mainly due to the high cost of detailed annotations. In this paper, we aim to mitigate this limitation by introducing a hybrid semi-supervised learning approach that combines manual labels for overall quality with pseudo-labels of quality details within a multi-task framework. Our objective is to obtain more interpretable RIQA models without requiring extensive manual labeling. Pseudo-labels are generated by a Teacher model trained on a small dataset and then used to fine-tune a pre-trained model in a multi-task setting. Using a ResNet-18 backbone, we show that these weak annotations improve quality assessment over single-task baselines (F1: 0.875 vs. 0.863 on EyeQ, and 0.778 vs. 0.763 on DeepDRiD), matching or surpassing existing methods. The multi-task model achieved performance statistically comparable to the Teacher for most detail prediction tasks (p > 0.05). In a newly annotated EyeQ subset released with this paper, our model performed similarly to experts, suggesting that pseudo-label noise aligns with expert variability. Our main finding is that the proposed semi-supervised approach not only improves overall quality assessment but also provides interpretable feedback on capture conditions (illumination, clarity, contrast). This enhances interpretability at no extra manual labeling cost and offers clinically actionable outputs to guide image recapture.

cs.CV↗

arXiv2025

ArchComplete: Autoregressive 3D Architectural Design Generation with Hierarchical Diffusion-Based Upsampling

Recent advances in 3D generative models have shown promising results but often fall short in capturing the complexity of architectural geometries and topologies and fine geometric details at high resolutions. To tackle this, we present ArchComplete, a two-stage voxel-based 3D generative pipeline consisting of a vector-quantised model, whose composition is modelled with an autoregressive transformer for generating coarse shapes, followed by a hierarchical upsampling strategy for further enrichment with fine structures and details. Key to our pipeline is (i) learning a contextually rich codebook of local patch embeddings, optimised alongside a 2.5D perceptual loss that captures global spatial correspondence of projections onto three axis-aligned orthogonal planes, and (ii) redefining upsampling as a set of conditional diffusion models learning from a hierarchy of randomly cropped coarse-to-fine local volumetric patches. Trained on our introduced dataset of 3D house models with fully modelled exterior and interior, ArchComplete autoregressively generates models at the resolution of $64^{3}$ and progressively refines them up to $512^{3}$, with voxel sizes as small as $ \approx 9\text{cm}$. ArchComplete solves a variety of tasks, including genetic interpolation and variation, unconditional synthesis, shape and plan-drawing completion, as well as geometric detailisation, while achieving state-of-the-art performance in quality, diversity, and computational efficiency.

cs.CV↗

arXiv2025

Lung-DDPM+: Efficient Thoracic CT Image Synthesis using Diffusion Probabilistic Model

Generative artificial intelligence (AI) has been playing an important role in various domains. Leveraging its high capability to generate high-fidelity and diverse synthetic data, generative AI is widely applied in diagnostic tasks, such as lung cancer diagnosis using computed tomography (CT). However, existing generative models for lung cancer diagnosis suffer from low efficiency and anatomical imprecision, which limit their clinical applicability. To address these drawbacks, we propose Lung-DDPM+, an improved version of our previous model, Lung-DDPM. This novel approach is a denoising diffusion probabilistic model (DDPM) guided by nodule semantic layouts and accelerated by a pulmonary DPM-solver, enabling the method to focus on lesion areas while achieving a better trade-off between sampling efficiency and quality. Evaluation results on the public LIDC-IDRI dataset suggest that the proposed method achieves 8$\times$ fewer FLOPs (floating point operations per second), 6.8$\times$ lower GPU memory consumption, and 14$\times$ faster sampling compared to Lung-DDPM. Moreover, it maintains comparable sample quality to both Lung-DDPM and other state-of-the-art (SOTA) generative models in two downstream segmentation tasks. We also conducted a Visual Turing Test by an experienced radiologist, showing the advanced quality and fidelity of synthetic samples generated by the proposed method. These experimental results demonstrate that Lung-DDPM+ can effectively generate high-quality thoracic CT images with lung nodules, highlighting its potential for broader applications, such as general tumor synthesis and lesion generation in medical imaging. The code and pretrained models are available at https://github.com/Manem-Lab/Lung-DDPM-PLUS.

cs.CV↗

arXiv2025

Augmentation-Based Deep Learning for Identification of Circulating Tumor Cells

Circulating tumor cells (CTCs) are crucial biomarkers in liquid biopsy, offering a noninvasive tool for cancer patient management. However, their identification remains particularly challenging due to their limited number and heterogeneity. Labeling samples for contrast limits the generalization of fluorescence-based methods across different hospital datasets. Analyzing single-cell images enables detailed assessment of cell morphology, subcellular structures, and phenotypic variations, often hidden in clustered images. Developing a method based on bright-field single-cell analysis could overcome these limitations. CTCs can be isolated using an unbiased workflow combining Parsortix technology, which selects cells based on size and deformability, with DEPArray technology, enabling precise visualization and selection of single cells. Traditionally, DEPArray-acquired digital images are manually analyzed, making the process time-consuming and prone to variability. In this study, we present a Deep Learning-based classification pipeline designed to distinguish CTCs from leukocytes in blood samples, aimed to enhance diagnostic accuracy and optimize clinical workflows. Our approach employs images from the bright-field channel acquired through DEPArray technology leveraging a ResNet-based CNN. To improve model generalization, we applied three types of data augmentation techniques and incorporated fluorescence (DAPI) channel images into the training phase, allowing the network to learn additional CTC-specific features. Notably, only bright-field images have been used for testing, ensuring the model's ability to identify CTCs without relying on fluorescence markers. The proposed model achieved an F1-score of 0.798, demonstrating its capability to distinguish CTCs from leukocytes. These findings highlight the potential of DL in refining CTC analysis and advancing liquid biopsy applications.

eess.IV↗

arXiv2025

Path and Bone-Contour Regularized Unpaired MRI-to-CT Translation

Accurate MRI-to-CT translation promises the integration of complementary imaging information without the need for additional imaging sessions. Given the practical challenges associated with acquiring paired MRI and CT scans, the development of robust methods capable of leveraging unpaired datasets is essential for advancing the MRI-to-CT translation. Current unpaired MRI-to-CT translation methods, which predominantly rely on cycle consistency and contrastive learning frameworks, frequently encounter challenges in accurately translating anatomical features that are highly discernible on CT but less distinguishable on MRI, such as bone structures. This limitation renders these approaches less suitable for applications in radiation therapy, where precise bone representation is essential for accurate treatment planning. To address this challenge, we propose a path- and bone-contour regularized approach for unpaired MRI-to-CT translation. In our method, MRI and CT images are projected to a shared latent space, where the MRI-to-CT mapping is modeled as a continuous flow governed by neural ordinary differential equations. The optimal mapping is obtained by minimizing the transition path length of the flow. To enhance the accuracy of translated bone structures, we introduce a trainable neural network to generate bone contours from MRI and implement mechanisms to directly and indirectly encourage the model to focus on bone contours and their adjacent regions. Evaluations conducted on three datasets demonstrate that our method outperforms existing unpaired MRI-to-CT translation approaches, achieving lower overall error rates. Moreover, in a downstream bone segmentation task, our approach exhibits superior performance in preserving the fidelity of bone structures. Our code is available at: https://github.com/kennysyp/PaBoT.

cs.CV↗

arXiv2025

Anatomy-Informed Deep Learning and Radiomics for Automated Neurofibroma Segmentation in Whole-Body MRI

Neurofibromatosis Type 1 is a genetic disorder characterized by the development of neurofibromas (NFs), which exhibit significant variability in size, morphology, and anatomical location. Accurate and automated segmentation of these tumors in whole-body magnetic resonance imaging (WB-MRI) is crucial to assess tumor burden and monitor disease progression. In this study, we present and analyze a fully automated pipeline for NF segmentation in fat-suppressed T2-weighted WB-MRI, consisting of three stages: anatomy segmentation, NF segmentation, and tumor candidate classification. In the first stage, we use the MRSegmentator model to generate an anatomy segmentation mask, extended with a high-risk zone for NFs. This mask is concatenated with the input image as anatomical context information for NF segmentation. The second stage employs an ensemble of 3D anisotropic anatomy-informed U-Nets to produce an NF segmentation confidence mask. In the final stage, tumor candidates are extracted from the confidence mask and classified based on radiomic features, distinguishing tumors from non-tumor regions and reducing false positives. We evaluate the proposed pipeline on three test sets representing different conditions: in-domain data (test set 1), varying imaging protocols and field strength (test set 2), and low tumor burden cases (test set 3). Experimental results show a 68% improvement in per-scan Dice Similarity Coefficient (DSC), a 21% increase in per-tumor DSC, and a two-fold improvement in F1 score for tumor detection in high tumor burden cases by integrating anatomy information. The method is integrated into the 3D Slicer platform for practical clinical use, with the code publicly accessible.

eess.IV↗

arXiv2024

Leveraging Self-Supervised Learning for Scene Classification in Child Sexual Abuse Imagery

Crime in the 21st century is split into a virtual and real world. However, the former has become a global menace to people's well-being and security in the latter. The challenges it presents must be faced with unified global cooperation, and we must rely more than ever on automated yet trustworthy tools to combat the ever-growing nature of online offenses. Over 10 million child sexual abuse reports are submitted to the US National Center for Missing \& Exploited Children every year, and over 80% originate from online sources. Therefore, investigation centers cannot manually process and correctly investigate all imagery. In light of that, reliable automated tools that can securely and efficiently deal with this data are paramount. In this sense, the scene classification task looks for contextual cues in the environment, being able to group and classify child sexual abuse data without requiring to be trained on sensitive material. The scarcity and limitations of working with child sexual abuse images lead to self-supervised learning, a machine-learning methodology that leverages unlabeled data to produce powerful representations that can be more easily transferred to downstream tasks. This work shows that self-supervised deep learning models pre-trained on scene-centric data can reach 71.6% balanced accuracy on our indoor scene classification task and, on average, 2.2 percentage points better performance than a fully supervised version. We cooperate with Brazilian Federal Police experts to evaluate our indoor classification model on actual child abuse material. The results demonstrate a notable discrepancy between the features observed in widely used scene datasets and those depicted on sensitive materials.

cs.CV↗

arXiv2025

Semantic BIM enrichment for firefighting assets: Fire-ART dataset and panoramic image-based 3D reconstruction

Inventory management of firefighting assets is crucial for emergency preparedness, risk assessment, and on-site fire response. However, conventional methods are inefficient due to limited capabilities in automated asset recognition and reconstruction. To address the challenge, this research introduces the Fire-ART dataset and develops a panoramic image-based reconstruction approach for semantic enrichment of firefighting assets into BIM models. The Fire-ART dataset covers 15 fundamental assets, comprising 2,626 images and 6,627 instances, making it an extensive and publicly accessible dataset for asset recognition. In addition, the reconstruction approach integrates modified cube-map conversion and radius-based spherical camera projection to enhance recognition and localization accuracy. Through validations with two real-world case studies, the proposed approach achieves F1-scores of 73% and 88% and localization errors of 0.620 and 0.428 meters, respectively. The Fire-ART dataset and the reconstruction approach offer valuable resources and robust technical solutions to enhance the accurate digital management of fire safety equipment.

cs.CV↗

arXiv2025

Adaptive Mix for Semi-Supervised Medical Image Segmentation

Mix-up is a key technique for consistency regularization-based semi-supervised learning methods, blending two or more images to generate strong-perturbed samples for strong-weak pseudo supervision. Existing mix-up operations are performed either randomly or with predefined fixed rules, such as replacing low-confidence patches with high-confidence ones. The former lacks control over the perturbation degree, leading to overfitting on randomly perturbed samples, while the latter tends to generate images with trivial perturbations, both of which limit the effectiveness of consistency regularization. This paper aims to answer the following question: How can image mix-up perturbation be adaptively performed during training? To this end, we propose an Adaptive Mix algorithm (AdaMix) for image mix-up in a self-paced learning manner. Given that, in general, a model's performance gradually improves during training, AdaMix is equipped with a self-paced curriculum that, in the initial training stage, provides relatively simple perturbed samples and then gradually increases the difficulty of perturbed images by adaptively controlling the perturbation degree based on the model's learning state estimated by a self-paced regularize. We develop three frameworks with our AdaMix, i.e., AdaMix-ST, AdaMix-MT, and AdaMix-CT, for semi-supervised medical image segmentation. Extensive experiments on three public datasets show that the proposed frameworks can achieve superior performance. For example, compared with the state-of-the-art, AdaMix-CT achieves relative improvements of 2.62% in Dice similarity coefficient and 48.25% in average surface distance on the ACDC dataset with 10% labeled data. The results demonstrate that mix-up operations with dynamically adjusted perturbation strength based on the segmentation model's state can significantly enhance the effectiveness of consistency regularization.

cs.CV↗

arXiv2025

Extreme Cardiac MRI Analysis under Respiratory Motion: Results of the CMRxMotion Challenge

Deep learning models have achieved state-of-the-art performance in automated Cardiac Magnetic Resonance (CMR) analysis. However, the efficacy of these models is highly dependent on the availability of high-quality, artifact-free images. In clinical practice, CMR acquisitions are frequently degraded by respiratory motion, yet the robustness of deep learning models against such artifacts remains an underexplored problem. To promote research in this domain, we organized the MICCAI CMRxMotion challenge. We curated and publicly released a dataset of 320 CMR cine series from 40 healthy volunteers who performed specific breathing protocols to induce a controlled spectrum of motion artifacts. The challenge comprised two tasks: 1) automated image quality assessment to classify images based on motion severity, and 2) robust myocardial segmentation in the presence of motion artifacts. A total of 22 algorithms were submitted and evaluated on the two designated tasks. This paper presents a comprehensive overview of the challenge design and dataset, reports the evaluation results for the top-performing methods, and further investigates the impact of motion artifacts on five clinically relevant biomarkers. All resources and code are publicly available at: https://github.com/CMRxMotion

eess.IV↗

arXiv2025

Breast density in MRI: an AI-based quantification and relationship to assessment in mammography

Mammographic breast density is a well-established risk factor for breast cancer. Recently there has been interest in breast MRI as an adjunct to mammography, as this modality provides an orthogonal and highly quantitative assessment of breast tissue. However, its 3D nature poses analytic challenges related to delineating and aggregating complex structures across slices. Here, we applied an in-house machine-learning algorithm to assess breast density on normal breasts in three MRI datasets. Breast density was consistent across different datasets (0.104 - 0.114). Analysis across different age groups also demonstrated strong consistency across datasets and confirmed a trend of decreasing density with age as reported in previous studies. MR breast density was correlated with mammographic breast density, although some notable differences suggest that certain breast density components are captured only on MRI. Future work will determine how to integrate MR breast density with current tools to improve future breast cancer risk prediction.

cs.CV↗

arXiv2024

Data-Driven Uncertainty-Aware Forecasting of Sea Ice Conditions in the Gulf of Ob Based on Satellite Radar Imagery

The increase in Arctic marine activity due to rapid warming and significant sea ice loss necessitates highly reliable, short-term sea ice forecasts to ensure maritime safety and operational efficiency. In this work, we present a novel data-driven approach for sea ice condition forecasting in the Gulf of Ob, leveraging sequences of radar images from Sentinel-1, weather observations, and GLORYS forecasts. Our approach integrates advanced video prediction models, originally developed for vision tasks, with domain-specific data preprocessing and augmentation techniques tailored to the unique challenges of Arctic sea ice dynamics. Central to our methodology is the use of uncertainty quantification to assess the reliability of predictions, ensuring robust decision-making in safety-critical applications. Furthermore, we propose a confidence-based model mixture mechanism that enhances forecast accuracy and model robustness, crucial for reliable operations in volatile Arctic environments. Our results demonstrate substantial improvements over baseline approaches, underscoring the importance of uncertainty quantification and specialized data handling for effective and safe operations and reliable forecasting.

cs.CV↗

arXiv2025

DIMA: DIffusing Motion Artifacts for unsupervised correction in brain MRI images

Motion artifacts remain a significant challenge in Magnetic Resonance Imaging (MRI), compromising diagnostic quality and potentially leading to misdiagnosis or repeated scans. Existing deep learning approaches for motion artifact correction typically require paired motion-free and motion-affected images for training, which are rarely available in clinical settings. To overcome this requirement, we present DIMA (DIffusing Motion Artifacts), a novel framework that leverages diffusion models to enable unsupervised motion artifact correction in brain MRI. Our two-phase approach first trains a diffusion model on unpaired motion-affected images to learn the distribution of motion artifacts. This model then generates realistic motion artifacts on clean images, creating paired datasets suitable for supervised training of correction networks. Unlike existing methods, DIMA operates without requiring k-space manipulation or detailed knowledge of MRI sequence parameters, making it adaptable across different scanning protocols and hardware. Comprehensive evaluations across multiple datasets and anatomical planes demonstrate that our method achieves comparable performance to state-of-the-art supervised approaches while offering superior generalizability to real clinical data. DIMA represents a significant advancement in making motion artifact correction more accessible for routine clinical use, potentially reducing the need for repeat scans and improving diagnostic accuracy.

eess.IV↗

arXiv2023

Sequential training of GANs against GAN-classifiers reveals correlated "knowledge gaps" present among independently trained GAN instances

Modern Generative Adversarial Networks (GANs) generate realistic images remarkably well. Previous work has demonstrated the feasibility of "GAN-classifiers" that are distinct from the co-trained discriminator, and operate on images generated from a frozen GAN. That such classifiers work at all affirms the existence of "knowledge gaps" (out-of-distribution artifacts across samples) present in GAN training. We iteratively train GAN-classifiers and train GANs that "fool" the classifiers (in an attempt to fill the knowledge gaps), and examine the effect on GAN training dynamics, output quality, and GAN-classifier generalization. We investigate two settings, a small DCGAN architecture trained on low dimensional images (MNIST), and StyleGAN2, a SOTA GAN architecture trained on high dimensional images (FFHQ). We find that the DCGAN is unable to effectively fool a held-out GAN-classifier without compromising the output quality. However, StyleGAN2 can fool held-out classifiers with no change in output quality, and this effect persists over multiple rounds of GAN/classifier training which appears to reveal an ordering over optima in the generator parameter space. Finally, we study different classifier architectures and show that the architecture of the GAN-classifier has a strong influence on the set of its learned artifacts.

cs.LG↗

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