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Information geometric bound on general chemical reaction networks

We investigate the dynamics of chemical reaction networks (CRNs) with the goal of deriving an upper bound on their reaction rates. This task is challenging due to the nonlinear nature and discrete structure inherent in CRNs. To address this, we employ an information geometric approach, using the natural gradient, to develop a nonlinear system that yields an upper bound for CRN dynamics. We validate our approach through numerical simulations, demonstrating faster convergence in a specific class of CRNs. This class is characterized by the number of chemicals, the maximum value of stoichiometric coefficients of the chemical reactions, and the number of reactions. We also compare our method to a conventional approach, showing that the latter cannot provide an upper bound on reaction rates of CRNs. While our study focuses on CRNs, the ubiquity of hypergraphs in fields from natural sciences to engineering suggests that our method may find broader applications, including in information science.

physics.chem-ph

Sharp Restricted Isometry Thresholds for Global Minima of Rank-Restricted Matrix LASSO

We determine the sharp restricted isometry threshold for recovery at global minima of the rank-restricted matrix LASSO. For target rank $r_{\star}$, if the rank-$k$ RIP constant satisfies $δ<δ_{\mathrm{sharp}}(k/r_{\star})$, where $δ_{\mathrm{sharp}}(t)=t/(4-t)$ for $0<t<4/3$ and $δ_{\mathrm{sharp}}(t)=\sqrt{(t-1)/t}$ for $t\ge4/3$, then every global minimizer has Frobenius error $\lesssim\sqrt{r_{\star}}λ$ for all $λ\gtrsim\|\mathcal{A}^{*}(ξ)\|_{\mathrm{op}}$ and at every search rank $r\ge r_{\star}$. The constants depend only on the RIP constant and $t=k/r_{\star}$, and in particular are independent of the search rank. When the rank restriction is inactive, the result specializes to the ordinary convex matrix LASSO. We also obtain the analogous results for sparsity-restricted vector LASSO. Conversely, we show that the threshold $δ<δ_{\mathrm{sharp}}(k/r_{\star})$ cannot be improved, due to the existence of counterexamples whose global minimizers fail to recover the ground truth.

stat.ML

Generalized Splines and Gaussian Processes

For finite-dimensional linear inverse problems where the variables are Gaussian, it is well-known that the minimum-mean-square error estimator takes the form of a regularized least-squares data fit. In this chapter, we show that this equivalence extends to a much broader infinite-dimensional setting where generalized splines take the role of linear regressors and generalized Gaussian processes on a nuclear space $S$ are the counterpart of Gaussian random vectors. The scope of this extension is of the same nature as the switch from the classic notion of function to that of a distribution, also known as a "generalized function." Our formalism involves a whitening/regularization operator $L: S\to S'$ whose continuous extension induces a native Hilbert space $H\subset S'$ that plays a central role in our characterization. The presentation is self-contained for the most part and remarkably general and powerful. It allows for the recovery of all known instances of such equivalences; in particular, the methods involving innovations and reproducing-kernel Hilbert spaces developed by Kailath and his students, and the mathematical correspondence between fractional splines and Mandelbrot's fractional Brownian motion (fractals), with the former being the optimal estimators of the latter. It also covers general Bayesian methods for the resolution of infinite-dimensional inverse problems.

math.ST

Learning Representations through Token Prediction: Geometry, Approximation, and Downstream Guarantees

Token prediction is a central pre-training objective for modern language models. Despite its empirical success, why token prediction learns broadly useful representations remains incompletely understood. We develop a statistical framework connecting token prediction with representation geometry, encoder approximation, and downstream performance. Under a softmax prediction head, we show that accurate token prediction organizes token embeddings according to similarities between the distributions of contexts in which different token types appear, as measured by Hellinger distance, with explicit errors governed by prediction accuracy and token frequency. Meanwhile, the contextual representation provides a low-dimensional coordinate for the conditional distribution of the target token relative to these embeddings. We further introduce a self-consistency principle showing that repeated applications of a shared representation block can progressively refine the contextual representation without introducing additional block parameters. Among representations with the same prediction accuracy, this recurrent construction favors those that can be stably reconstructed from their contexts. Finally, we establish downstream guarantees for token generation, token community recovery, and classification by a linear probe, showing how prediction accuracy and recovered geometry translate into performance beyond the pre-training objective. Together, these results explain how the simple objective of predicting tokens can recover semantic geometry and produce broadly useful representations. A controlled simulation illustrates the theoretical mechanisms.

stat.ML

The information geometry of product-reference discrete diffusion: Interaction growth complexity and optimal scheduling

We study a class of product-reference diffusion algorithms for sampling from a discrete distribution. We show that their sampling performance can be characterized using a path-based measure of data geometry that we call the interaction growth complexity (IGC). We show that a bivariate IGC kernel gives an exact representation of both the KL discretization error and a simple one-step upper bound. The simpler univariate IGC density can be used to study the effect of stepsize choices on the iteration complexity required to obtain $ε$-accurate samples in KL divergence. Samplers that traverse the path with equi-spaced steps in log-squared-reliability-odds have performance that depends on the aggregate IGC mass, whereas refined choices of stepsizes have a lower complexity depending on a square-root functional. In the fine-grid limit, both of these characterizations become sharp. We also allow general product reference distributions and show that the reference law can substantially reshape the IGC profile and the resulting sampling complexity; in particular, references far from both the uniform and the data marginals can yield dimension-dependent improvements. Finally, the aggregate IGC mass admits bounds in terms of total correlation and dual total correlation, thereby connecting the pathwise geometry to classical measures of multivariate dependence.

stat.ML

Large-scale spatial variable gene atlas for spatial transcriptomics

Spatial variable genes (SVGs) reveal critical information about tissue architecture, cellular interactions, and disease microenvironments. As spatial transcriptomics (ST) technologies proliferate, accurately identifying SVGs across diverse platforms, tissue types, and disease contexts has become both a major opportunity and a significant computational challenge. Here, we present a comprehensive benchmarking study of 20 state-of-the-art SVG detection methods using human slides from STimage-1K4M, a large-scale resource of ST data comprising 662 slides from more than 18 tissue types. We evaluate each method across a range of biologically and technically meaningful criteria, including recovery of pathologist-annotated domain-specific markers, cross-slide reproducibility, scalability to high-resolution data, and robustness to technical variation. Our results reveal marked differences in performance depending on tissue type, spatial resolution, and study design. Beyond benchmarking, we construct the first cross-tissue atlas of SVGs, enabling comparative analysis of spatial gene programs across cancer and normal tissues. We observe similarities between pairs of tissues that reflect developmental and functional relationships, such as high overlap between thymus and lymph node, and uncover spatial gene programs associated with metastasis, immune infiltration, and tissue-of-origin identity in cancer. Together, our work defines a framework for evaluating and interpreting spatial gene expression and establishes a reference resource for the ST community.

stat.AP

Bellman-sufficient Information Complexity

We introduce Bellman-sufficient information complexity for minimax analysis of sequential decision problems. A Bellman-sufficient state retains enough of the history to close the controlled recursion, while an index $Y=χ(Ω)$ specifies the decision-relevant information being charged. The upper bound is a log-penalized Bellman program; the lower bound is a Bellman--Fano comparison along an algorithm-dependent reference trajectory. If the two values match at a common localization scale and the stated admissibility, calibration, and growth conditions hold, they form an information-risk sandwich. UCB, E2D, and AMS/EBO control or relax the upper Bellman bracket in different ways. For the main application, we give a negative answer to a widely studied form of the GP--UCB minimax-optimality question. For every $0<α<1/4$, we construct one bounded continuous kernel whose minimax regret is $Θ(T^{1-α})$ along an infinite sequence of horizons, while two globally calibrated GP--UCB rules incur linear regret under one fixed truth. An epochwise finite-marginal action-index AIR Bellman policy, implemented through robust AIR/AMS/EBO control, attains the minimax order. The construction separates realized information from the cost of uniform optimism: many low-value directions inflate the exploration multiplier and change the trajectory. Through the canonical RKHS feature map, it also yields a finite-horizon polynomial minimax separation for the specified maximal-information-calibrated LinUCB rule. A reproducible experiment illustrates the mechanism.

cs.LG

Robust Assortment Optimization from Observational Data

Assortment optimization is a fundamental challenge in modern retail and recommendation systems, where the goal is to select a subset of products that maximizes expected revenue under complex customer choice behaviors. While recent advances in data-driven methods have leveraged historical data to learn and optimize assortments, these approaches typically rely on strong assumptions -- namely, the stability of customer preferences and the correctness of the underlying choice models. However, such assumptions frequently break in real-world scenarios due to preference shifts and model misspecification, leading to poor generalization and revenue loss. Motivated by this limitation, we propose a robust framework for data-driven assortment optimization that accounts for potential distributional shifts in customer choice behavior. Our approach models potential preference shift from a nominal choice model that generates data and seeks to maximize worst-case expected revenue. We first establish the computational tractability of robust assortment planning when the nominal model is known, then advance to the data-driven setting, where we design statistically optimal algorithms that minimize the data requirements while maintaining robustness. Our theoretical analysis provides both upper bounds and matching lower bounds on the sample complexity, offering theoretical guarantees for robust generalization. Notably, we uncover and identify the notion of ``robust item-wise coverage'' as the minimal data requirement to enable sample-efficient robust assortment learning. Our work bridges the gap between robustness and statistical efficiency in assortment learning, contributing new insights and tools for reliable assortment optimization under uncertainty.

stat.ML

Diffusion Distillation for Efficient Weather Ensembles

Diffusion models generate skillful weather ensembles but require costly iterative sampling. We introduce a supervised energy-distance distillation method that compresses a multi-step diffusion teacher into a single-step student by aligning student forecasts with teacher samples and ground-truth observations. Experiments on global forecasting and typhoon-track prediction show that our student outperforms existing distillation methods and preserves skill for extreme events. It matches or surpasses the teacher across key metrics using only one neural function evaluation per autoregressive step.

cs.LG

Signed random Fourier features for fast density estimation with indefinite kernels

Kernel density estimation (KDE) is one of the most fundamental statistical estimators of density functions. Its direct implementation on a dataset of $N$ points incurs an $\mathcal{O}(N^{2})$ computational cost, which is prohibitive for large-scale datasets. Kernel approximation techniques can be applied to bring the computational cost down to $\mathcal{O}(N)$. The random Fourier features (RFF) technique, based on sampling from the spectral density of the kernel function, has become popular to speed up kernel estimators for machine learning applications. Unfortunately, it is restricted to positive definite kernels, while the majority of kernel functions popular in KDE, such as the parabolic kernel, do not satisfy this property. To overcome this limitation, this article introduces the signed random Fourier features (SRFF) technique. It is a generalization of RFF compatible with indefinite kernels whose inverse Fourier transform is absolutely integrable. The motivation for introducing this method is to speed up KDE in the case of multivariate compact kernels, which are generally not positive definite. We detail how to implement SRFF for both product kernels and isotropic kernels. For the class of Kuttner-Golubov kernels $K(\boldsymbol{x}_{i},\boldsymbol{x}_{j})=(1-\left\Vert \boldsymbol{x}_{i}-\boldsymbol{x}_{j}\right\Vert ^α)^β\mathbf{1}_{\{\left\Vert \boldsymbol{x}_{i}-\boldsymbol{x}_{j}\right\Vert \leq1\}}$ where $\boldsymbol{x}_{i}\in\mathbb{R}^{d}$, $\boldsymbol{x}_{j}\in\mathbb{R}^{d}$, $α>0$, $β>0$, which includes the triangular, parabolic, biweight, triweight, and other kernel functions of interest for KDE as particular examples, we provide an explicit acceptance-rejection algorithm to sample from its signed spectral density. Our numerical tests on a dataset of one million points confirm the computational efficiency and accuracy of SRFF for large-scale KDE.

stat.CO

I-FLOP: Fast Learning of Order and Parents from Interventional Data

We extend the FLOP (fast learning of order and parents) algorithm recently proposed by Wienöbst et al. (2026) from observational to interventional data. In particular, we use the interventional BIC score of Hauser and Bühlmann (2012), adapting it to be used with the iterative Cholesky-based score updates that are partly responsible for FLOP's speed. We show that, in the sample limit, I-FLOP recovers a DAG in the same interventional Markov equivalence class as the data-generating DAG. We compare I-FLOP to existing causal structure learning algorithms on real and simulated interventional data, where it performs favorably in terms of both performance and run time.

stat.ML

Content Exploration Beyond the Feed: Creator Supply and the Shared Corpus

Industrial recommenders give new content initial views through budgeted exploration, then use early performance to decide further delivery. On many short-video platforms, exploration is the primary way new videos reach viewers. Viewer-side tests measure consumption; the published budget objectives we review omit creator response. We analyze four experiments on a major short-video platform. An eight-month creator ablation finds production exploration raises videos posted per creator by 8.55% and creators posting at least once by 7.10% relative to a minimal floor. A budget-matched reallocation raises creator participation with no detectable short-run viewer-side change. A year-long viewer ablation finds 1.74% more video views but 2.13% less view time. A delivered view creates immediate feed value, can trigger organic take-up, and can induce creator supply. Take-up and supply replenish a shared corpus, creating two measurement limits. Viewer-side A/B tests cancel the corpus effect when both arms consume the same corpus. Giving each arm its own corpus avoids cancellation, but turnover still controls the horizon. If the corpus turns over at rate w per posting cycle, a t-cycle experiment expresses at most wt of the eventual corpus effect. More users reduce noise but do not speed turnover. Before the corpus path visibly bends, data cannot distinguish a modest fast effect from an arbitrarily large slow one, so a valid confidence interval may lack a finite upper endpoint. As predicted, the three-week co-diverted experiment cannot determine the sign of the eventual corpus effect. Within the window, it identifies the direct feed effect, and an exploratory cohort analysis detects organic lift after exploration ends. The experiments establish a positive creator response, measure the gross corpus flow visible within three weeks, and show the design and duration needed to identify total value.

cs.IR

Test of partial effects for Frechet regression on Bures-Wasserstein manifolds

We propose a novel test for assessing partial effects in Fréchet regression with responses lying on the Bures-Wasserstein manifold. Under the null hypothesis, we show that the statistic admits a degenerate V-statistic approximation whose limiting distribution is a weighted mixture of chi-squared random variables, with weights determined by the eigenvalues of an integral operator associated with a reproducing kernel Hilbert space (RKHS) kernel. We establish the asymptotic validity and consistency of the proposed test. Its finite-sample performance is examined through simulation studies. We apply the proposed test to study the effect of age, while controlling for other covariates, on gene co-expression structure in single-cell data.

stat.ML

The Value of Depth in Message Passing on Sparse Graphs: A Kesten-Stigum Dichotomy

How deep does a graph neural network need to be on a sparse graph? We study its purest statistical form: node classification on the sparse contextual stochastic block model (CSBM) with average degree $Δ=O(1)$, whose local weak limit is a broadcast-labelled Poisson Galton-Watson tree. Prior work derived a message-passing classifier $h_\ell$ that aggregates from each vertex at distance $k\le\ell$ the attenuated evidence $2\operatorname{artanh}(γ^k t(X_v))$, with $γ$ the edge signal and $t$ a bounded likelihood-ratio transform of the feature. We prove that the value of depth is governed by a single number, the Kesten-Stigum ratio $κ=γ^2Δ$. Below the threshold ($κ<1$), the error sequence is Cauchy at a geometric rate, $|\mathcal{E}(\ell)-\mathcal{E}(\ell')|\le Cκ^{(\ell+1)/3}$ for all $\ell'>\ell$, so all layers beyond depth $O(\log(1/ε))$ change the error by less than $ε$; conversely, under mild regularity each sufficiently deep layer still flips the decision with probability at least $cκ^{\ell/2}$, the empirically sharp exponent. Above the threshold ($κ>1$), depth is geometrically productive: $\mathcal{E}(\ell)$ is driven to a branching-process floor of order at most $1/(κ-1)$ at any geometric rate $κ^{-s\ell}$, $s<1$ (this bound has content only for $κ>17$). No local classifier of any depth beats the universal floor $e^{-Δ}Φ(-ζ)$ set by isolated roots ($ζ$ the feature signal-to-noise ratio), while the first layer provably helps by an explicit total-variation amount. Simulations with an exact belief-propagation baseline on the same trees show that the pairwise rule's error curve is mildly non-monotone in $\ell$, so an optimal finite depth exists (an exact instance is certified in the appendix), while BP saturates strictly faster, at an effective per-layer ratio below $κ$ that we identify.

math.ST

Sharp mean-field analysis of permutation mixtures and permutation-invariant decisions

We develop sharp bounds on the statistical distance between high-dimensional permutation mixtures and their i.i.d. counterparts. Our approach establishes a new geometric link between the spectrum of a complex channel overlap matrix and the information geometry of the channel, yielding tight dimension-independent bounds that close gaps left by previous work. Within this geometric framework, we also derive dimension-dependent bounds that uncover phase transitions in dimensionality for Gaussian and Poisson families. Applied to compound decision problems, this refined control of permutation mixtures enables sharper mean-field analyses of permutation-invariant decision rules, yielding strong non-asymptotic equivalence results between two notions of compound regret in Gaussian and Poisson models.

math.ST

SHAKE-GNN: Scalable Hierarchical Kirchhoff-Forest Graph Neural Network

Graph Neural Networks (GNNs) have achieved remarkable success across a range of learning tasks. However, scaling GNNs to large graphs remains a significant challenge, especially for graph-level tasks. In this work, we introduce SHAKE-GNN, a novel scalable graph-level GNN framework based on a hierarchy of Kirchhoff Forests, a class of random spanning forests used to construct stochastic multi-resolution decompositions of graphs. SHAKE-GNN produces multi-scale representations, enabling flexible trade-offs between efficiency and performance. We introduce an improved, data-driven strategy for selecting the trade-off parameter and analyse the time-complexity of SHAKE-GNN. Experimental results on multiple large-scale graph classification benchmarks demonstrate that SHAKE-GNN achieves competitive performance while offering improved scalability.

cs.LG

A Complete Characterization of Tensorizable $f$-divergences

Csiszar's formulation of the $f$-divergence introduced a vast family of functionals for quantifying dissimilarity between probability distributions. However, many applications in statistics and information theory rely only on a few $f$-divergences, such as the Kullback-Leibler divergence, the $χ^2$-divergence, and the squared Hellinger distance. These divergences are especially useful because they admit simple compositional formulas under product measures, a property sometimes referred to as tensorization. In this work, we refine a formalism of tensorization previously introduced in the literature. Then, we show that any possible tensorization formula has a multi-affine form characterized by a single parameter, and identify all tensorizable $f$-divergences under our adopted notion of tensorization.

cs.IT

Text Data Analysis and Classification Methods - Insights from Customer Letters in Life Insurance

The business of life insurance companies is characterized by long-term contracts. For this reason, data describing customers is of immense value. A portion of the data provided to the customer is rarely or not at all analyzed. This includes customer letters of any kind. This work focuses on classifying customer letters as cancellations and identifying the respective reason, if available. The outlined approach can also be applied to other business transactions and reasons. We discuss data acquisition and preparation, present alternatives, and explain the reasons for the chosen approach. A successful implementation of such a tool can lead to a better understanding of customer cancellation behavior by the insurer, enabling more targeted actions in certain situations.

stat.AP