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At least 19 recordsLinked to original sources

Evolution to the Edge of Chaos in Imitation Game

Motivated by the evolution of complex bird songs, an abstract imitation game is proposed to study the increase of dynamical complexity: Artificial "birds" display a "song" time series to each other, and those that imitate the other's song better win the game. With the introduction of population dynamics according to the score of the game and the mutation of parameters for the song dynamics, the dynamics is found to evolve towards the borderline between chaos and a periodic window, after punctuated equilibria. The importance of edge of chaos with topological chaos for complexity is stressed.

adap-org

Swarms, Phase Transitions, and Collective Intelligence

A spacially extended model of the collective behavior of a large number of locally acting organisms is proposed in which organisms move probabilistically between local cells in space, but with weights dependent on local morphogenetic substances, or morphogens. The morphogens are in turn are effected by the passage of an organism. The evolution of the morphogens, and the corresponding flow of the organisms constitutes the collective behavior of the group. Such models have various types of phase transitions and self-organizing properties controlled both by the level of the noise, and other parameters. The model is then applied to the specific case of ants moving on a lattice. The local behavior of the ants is inspired by the actual behavior observed in the laboratory, and analytic results for the collective behavior are compared to the corresponding laboratory results. It is hoped that the present model might serve as a paradigmatic example of a complex cooperative system in nature. In particular swarm models can be used to explore the relation of nonequilibrium phase transitions to at least three important issues encountered in artificial life. Firstly, that of emergence as complex adaptive behavior. Secondly, as an exploration of continuous phase transitions in biological systems. Lastly, to derive behavioral criteria for the evolution of collective behavior in social organisms.

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Beliefs and Cooperation

Individuals in groups must often choose between acting selfishly and cooperating for the common good. The choices they make are based on their beliefs on how they expect their actions to affect others. We show that for a broad set of beliefs and group characteristics cooperation can appear spontaneously in non-cooperative groups after very long periods of time. When delays in information are unavoidable the group dynamics acquires a wide repertoire of behaviors, ranging from opportunistic oscillations to bursty chaos, thus excluding the possibility of sustained cooperation.

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On Modelling Life

We present a theoretical as well as experimental investigation of a population of self-replicating segments of code subject to random mutation and survival of the fittest. Under the assumption that such a system constitutes a minimal system with characteristics of life, we obtain a number of statements on the evolution of complexity and the trade-off between entropy and information.

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Evolutionary Learning in the 2D Artificial Life System "Avida"

We present a new tierra-inspired artificial life system with local interactions and two-dimensional geometry, based on an update mechanism akin to that of 2D cellular automata. We find that the spatial geometry is conducive to the development of diversity and thus improves adaptive capabilities. We also demonstrate the adaptive strength of the system by breeding cells with simple computational abilities, and study the dependence of this adaptability on mutation rate and population size.

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Analyzing Social Network Structures in the Iterated Prisoner's Dilemma with Choice and Refusal

The Iterated Prisoner's Dilemma with Choice and Refusal (IPD/CR) is an extension of the Iterated Prisoner's Dilemma with evolution that allows players to choose and to refuse their game partners. From individual behaviors, behavioral population structures emerge. In this report, we examine one particular IPD/CR environment and document the social network methods used to identify population behaviors found within this complex adaptive system. In contrast to the standard homogeneous population of nice cooperators, we have also found metastable populations of mixed strategies within this environment. In particular, the social networks of interesting populations and their evolution are examined.

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The Fight Against the Second Law of Thermodynamics

After presenting possible motives for fighting against the second law of thermodynamics, several attempts to beat this law are analyzed. The second law wins, but an interesting interpretation of it emerges. This interpretation uses the notion of ``encoded order'' and claims that whether a system is or is not in thermodynamic equilibrium depends on the coordinates which the observer decides to measure. This interpretation may not be new, but most present day physicists seem to be unaware of it. The question of subjectivity of entropy and the connection between the present interpretation and ``algorithmic randomness'' are addressed. Key words: Maxwell's demon, perpetuum mobile, subjectivity, entropy, H-theorem, randomness, complexity, information.

adap-org

Traffic at the Edge of Chaos

We use a very simple description of human driving behavior to simulate traffic. The regime of maximum vehicle flow in a closed system shows near-critical behavior, and as a result a sharp decrease of the predictability of travel time. Since Advanced Traffic Management Systems (ATMSs) tend to drive larger parts of the transportation system towards this regime of maximum flow, we argue that in consequence the traffic system as a whole will be driven closer to criticality, thus making predictions much harder. A simulation of a simplified transportation network supports our argument.

adap-org

A Theory of Differentiation with Dynamic Clustering

A novel theory for cell differentiation is proposed, based on simulations with interacting artificial cells which have metabolic networks within, and divide into two when the final product is accumulated. Results of simulations with coupled chemical networks and division process lead to the following scenario of the differentiation: Up to some numbers of cells, divisions bring about almost identical cells with synchronized metabolic oscillations. As the number is increased the oscillations lose the synchrony, leading to groups of cells with different phases of oscillations. At later stage this differentiation is fixed in time, and cells spilt into groups with different chemical constituents spontaneously, which are transmitted to daughter cells by cell divisions. Hierarchical differentiation, origin of stem cells, and anomalous differentiation by transplantations are also discussed with relevance to real biological experimental results. (Keywords: differentiation, metabolic network, cell division, clustering, open chaos)

adap-org

Evolution of Cooperation, Differentiation, Complexity, and Diversity in an Iterated Three-person Game

A non-zero-sum 3-person coalition game is presented, to study the evolution of complexity and diversity in cooperation, where the population dynamics of players with strategies is given according to their scores in the iterated game and mutations. Two types of differentiations emerge initially; biased one to classes and temporal one to change their roles for coalition. Rules to change the hands are self-organized in a society through evolution. The co-evolution of diversity and complexity of strategies and interactions (or communications) are found at later stages of the simulation. Relevance of our results to the biological society is briefly discussed.

adap-org

Elements of a Theory of Simulation

Unlike computation or the numerical analysis of differential equations, simulation does not have a well established conceptual and mathematical foundation. Simulation is an arguable unique union of modeling and computation. However, simulation also qualifies as a separate species of system representation with its own motivations, characteristics, and implications. This work outlines how simulation can be rooted in mathematics and shows which properties some of the elements of such a mathematical framework has. The properties of simulation are described and analyzed in terms of properties of dynamical systems. It is shown how and why a simulation produces emergent behavior and why the analysis of the dynamics of the system being simulated always is an analysis of emergent phenomena. A notion of a universal simulator and the definition of simulatability is proposed. This allows a description of conditions under which simulations can distribute update functions over system components, thereby determining simulatability. The connection between the notion of simulatability and the notion of computability is defined and the concepts are distinguished. The basis of practical detection methods for determining effectively non-simulatable systems in practice is presented. The conceptual framework is illustrated through examples from molecular self-assembly end engineering.

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Hierarchical Crossover and Probability Landscapes of Genetic Operators

The time evolution of a simple model for crossover is discussed. A variant of this model with an improved exploration behavior in phase space is derived as a subset of standard one- and multi-point crossover operations. This model is solved analytically in the flat fitness case. Numerical simulations compare the way of phase space exploration of different genetic operators. In the case of a non-flat fitness landscape, numerical solutions of the evolution equations point out ways to estimate premature convergence.

adap-org

Hydrodynamic effects in density waves of granular flows

Granular flows in a narrow pipe are studied numerically by the model taking account of hydrodynamic effects of fluid surrounding particles. In the simulations density waves are observed over the wide range of the Stokes number, which represents the inertial effect of particles. The mechanisms of formation of the density waves are considered and two types of density waves, which are observed in the systems with zero and finite Stokes numbers, are presented. Power spectra of density waves obtained from the simulations with non-zero Stokes number show $1/f^α$ power law which is similar to that in experiments.

adap-org

How birds fly together: Long-range order in a two-dimensional dynamical XY model

We propose a non-equilibrium continuum dynamical model for the collective motion of large groups of biological organisms (e.g., flocks of birds, slime molds, etc.) Our model becomes highly non-trivial, and different from the equilibrium model, for $d<d_c=4$; nonetheless, we are able to determine its scaling exponents {\it exactly} in $d=2$, and show that, unlike equilibrium systems, our model exhibits a broken continuous symmetry even in $d=2$. Our model describes a large universality class of microscopic rules, including those recently simulated by Viscek et. al.

adap-org

Self-Organization in Models of Populations with Two-Parent Reproduction on a Rugged Fitness Landscape

The two-parent reproduction model of Derrida and Peliti is simulated on a rugged fitness landscape. Fixed fitness values for each possible genotype are assigned randomly, with all fit individuals having the same probability of reproduction. The previously observed transition to a self-organized state of the population with less recombinational load, implies an abrupt change of genetic overlap distributions, showing up characteristics of a phase transition. A crossover variant of the model has a smoother transition to the adapted regime, with a residual collective adaptation for small values of the threshold in fitness. When a geographical constraint (shortest possible distance) on pairwise reproduction in a population arranged one-dimensionally is imposed, a poised state results, suggestive of self-organized criticality.

adap-org

The Instability of Markets

Recent developments in the global liberalization of equity and currency markets, coupled to advances in trading technologies, are making markets increasingly interdependent. This increased fluidity raises questions about the stability of the international financial system. In this paper, we show that as couplings between stable markets grow, the likelihood of instabilities is increased, leading to a loss of general equilibrium as the system becomes increasingly large and diverse.

adap-org

A Geometric Formulation of Occam's Razor for Inference of Parametric Distributions

I define a natural measure of the complexity of a parametric distribution relative to a given true distribution called the {\it razor} of a model family. The Minimum Description Length principle (MDL) and Bayesian inference are shown to give empirical approximations of the razor via an analysis that significantly extends existing results on the asymptotics of Bayesian model selection. I treat parametric families as manifolds embedded in the space of distributions and derive a canonical metric and a measure on the parameter manifold by appealing to the classical theory of hypothesis testing. I find that the Fisher information is the natural measure of distance, and give a novel justification for a choice of Jeffreys prior for Bayesian inference. The results of this paper suggest corrections to MDL that can be important for model selection with a small amount of data. These corrections are interpreted as natural measures of the simplicity of a model family. I show that in a certain sense the logarithm of the Bayesian posterior converges to the logarithm of the {\it razor} of a model family as defined here. Close connections with known results on density estimation and ``information geometry'' are discussed as they arise.

adap-org