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arXiv · 1304.3351

YHap: software for probabilistic assignment of Y haplogroups from population re-sequencing data

Fan Zhang·Ruoyan Chen·Dongbing Liu·Xiaotian Yao·Guoqing Li·Yabin Jin·Chang Yu·Yingrui Li·Lachlan Coin
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Abstract

Y haplogroup analyses are an important component of genealogical reconstruction, population genetic analyses, medical genetics and forensics. These fields are increasingly moving towards use of low-coverage, high throughput sequencing. However, there is as yet no software available for using sequence data to assign Y haplogroup groups probabilistically, such that the posterior probability of assignment fully reflects the information present in the data, and borrows information across all samples sequenced from a population. YHap addresses this problem.

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Fan Zhang, Ruoyan Chen, Dongbing Liu, Xiaotian Yao, Guoqing Li, Yabin Jin, Chang Yu, Yingrui Li, Lachlan Coin. 2013-05-10. YHap: software for probabilistic assignment of Y haplogroups from population re-sequencing data. https://arxiv.org/abs/1304.3351

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