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arXiv · 1407.4344

Bistable switching asymptotics for the self regulating gene

Jay Newby
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Abstract

A simple stochastic model of a self regulating gene that displays bistable switching is analyzed. While on, a gene transcribes mRNA at a constant rate. Transcription factors can bind to the DNA and affect the gene's transcription rate. Before an mRNA is degraded, it synthesizes protein, which in turn regulates gene activity by influencing the activity of transcription factors. Protein is slowly removed from the system through degradation. Depending on how the protein regulates gene activity, the protein concentration can exhibit noise induced bistable switching. An asymptotic approximation of the mean switching rate is derived that includes the pre exponential factor, which improves upon a previously reported logarithmically accurate approximation. With the improved accuracy, a uniformly accurate approximation of the stationary probability density, describing the gene, mRNA copy number, and protein concentration is also obtained.

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Jay Newby. 2014-07-16. Bistable switching asymptotics for the self regulating gene. https://doi.org/10.1088/1751-8113/48/18/185001

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