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arXiv · 1702.04197

Dissimilar Symmetric Word Pairs in the Human Genome

Ana Helena Tavares·Jakob Raymaekers·Peter J. Rousseeuw·Raquel M. Silva·Carlos A. C. Bastos·Armando Pinho·Paula Brito·Vera Afreixo
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Abstract

In this work we explore the dissimilarity between symmetric word pairs, by comparing the inter-word distance distribution of a word to that of its reversed complement. We propose a new measure of dissimilarity between such distributions. Since symmetric pairs with different patterns could point to evolutionary features, we search for the pairs with the most dissimilar behaviour. We focus our study on the complete human genome and its repeat-masked version.

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Ana Helena Tavares, Jakob Raymaekers, Peter J. Rousseeuw, Raquel M. Silva, Carlos A. C. Bastos, Armando Pinho, Paula Brito, Vera Afreixo. 2017-07-05. Dissimilar Symmetric Word Pairs in the Human Genome. https://doi.org/10.1007/978-3-319-60816-7_30

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