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arXiv · 2007.01109

Wall entrapment of peritrichous bacteria: A mesoscale hydrodynamics simulation study

S. Mahdiyeh Mousavi·Gerhard Gompper·Roland G. Winkler
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Abstract

Microswimmers such as E. Coli bacteria accumulate and exhibit an intriguing dynamics near walls, governed by hydrodynamic and steric interactions. Insight into the underlying mechanisms and predominant interactions demand a detailed characterization of the entrapment process. We employ a mesoscale hydrodynamics simulation approach to study entrapment of a E. coli-type cell at a no-slip wall. The cell is modeled by a spherocylindrical body with several explicit helical flagella. Three stages of the entrapment process can be distinguished: the approaching regime, where a cell swims toward the wall on a nearly straight trajectory; a scattering regime, where the cell touches the wall, with an reorientation; and a surface-swimming regime. Our simulations show that steric interactions may dominate the entrapment process, yet, hydrodynamic interactions slow down the adsorption dynamics close to the boundary and imply a circular motion on the wall. The locomotion of the cell is characterized by a strong wobbling dynamics, with cells preferentially pointing toward the wall.

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S. Mahdiyeh Mousavi, Gerhard Gompper, Roland G. Winkler. 2020-07-02. Wall entrapment of peritrichous bacteria: A mesoscale hydrodynamics simulation study. https://doi.org/10.1039/d0sm00571a

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