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arXiv · 2103.00562

CREATe: Clinical Report Extraction and Annotation Technology

Yichao Zhou·Wei-Ting Chen·Bowen Zhang·David Lee·J. Harry Caufield·Kai-Wei Chang·Yizhou Sun·Peipei Ping·Wei Wang
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Abstract

Clinical case reports are written descriptions of the unique aspects of a particular clinical case, playing an essential role in sharing clinical experiences about atypical disease phenotypes and new therapies. However, to our knowledge, there has been no attempt to develop an end-to-end system to annotate, index, or otherwise curate these reports. In this paper, we propose a novel computational resource platform, CREATe, for extracting, indexing, and querying the contents of clinical case reports. CREATe fosters an environment of sustainable resource support and discovery, enabling researchers to overcome the challenges of information science. An online video of the demonstration can be viewed at https://youtu.be/Q8owBQYTjDc.

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Yichao Zhou, Wei-Ting Chen, Bowen Zhang, David Lee, J. Harry Caufield, Kai-Wei Chang, Yizhou Sun, Peipei Ping, Wei Wang. 2021-02-28. CREATe: Clinical Report Extraction and Annotation Technology. https://arxiv.org/abs/2103.00562

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