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arXiv · 2105.05475

MomentClosure.jl: automated moment closure approximations in Julia

Augustinas Sukys·Ramon Grima
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Abstract

MomentClosure.jl is a Julia package providing automated derivation of the time-evolution equations of the moments of molecule numbers for virtually any chemical reaction network using a wide range of moment closure approximations. It extends the capabilities of modelling stochastic biochemical systems in Julia and can be particularly useful when exact analytic solutions of the chemical master equation are unavailable and when Monte Carlo simulations are computationally expensive. MomentClosure.jl is freely accessible under the MIT license. Source code and documentation are available at https://github.com/augustinas1/MomentClosure.jl

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BibTeXRIS

Augustinas Sukys, Ramon Grima. 2021-05-12. MomentClosure.jl: automated moment closure approximations in Julia. https://arxiv.org/abs/2105.05475

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