SearcharxivSearch

arXiv · 2112.02180

Generalized Transitional Markov Chain Monte Carlo Sampling Technique for Bayesian Inversion

Abstract

In the context of Bayesian inversion for scientific and engineering modeling, Markov chain Monte Carlo sampling strategies are the benchmark due to their flexibility and robustness in dealing with arbitrary posterior probability density functions (PDFs). However, these algorithms been shown to be inefficient when sampling from posterior distributions that are high-dimensional or exhibit multi-modality and/or strong parameter correlations. In such contexts, the sequential Monte Carlo technique of transitional Markov chain Monte Carlo (TMCMC) provides a more efficient alternative. Despite the recent applicability for Bayesian updating and model selection across a variety of disciplines, TMCMC may require a prohibitive number of tempering stages when the prior PDF is significantly different from the target posterior. Furthermore, the need to start with an initial set of samples from the prior distribution may present a challenge when dealing with implicit priors, e.g. based on feasible regions. Finally, TMCMC can not be used for inverse problems with improper prior PDFs that represent lack of prior knowledge on all or a subset of parameters. In this investigation, a generalization of TMCMC that alleviates such challenges and limitations is proposed, resulting in a tempering sampling strategy of enhanced robustness and computational efficiency. Convergence analysis of the proposed sequential Monte Carlo algorithm is presented, proving that the distance between the intermediate distributions and the target posterior distribution monotonically decreases as the algorithm proceeds. The enhanced efficiency associated with the proposed generalization is highlighted through a series of test inverse problems and an engineering application in the oil and gas industry.

Explore related subjects

Keep this discovery

BibTeXRIS

Han Lu, Mohammad Khalil, Thomas Catanach, Jiefu Chen, Xuqing Wu, Xin Fu, Cosmin Safta, Yueqin Huang. 2021-12-03. Generalized Transitional Markov Chain Monte Carlo Sampling Technique for Bayesian Inversion. https://arxiv.org/abs/2112.02180

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

Estimating Hierarchically Rank Structured Covariance Matrices

We consider the problem of estimating a high-dimensional covariance matrix from a very limited number of samples. This problem is ubiquitous in computational fluid dynamics, where a small number of fluid snapshots must be used to construct a Gramian matrix determining a reduced-order model, as well as in computational geoscience, where a small ensemble of Earth system forecasts must be used to estimate the covariance matrix associated with the forecast uncertainty. It is common practice to regularize the small-sample covariance by imposing a "localization" structure that enforces a physically realistic correlation length scale, imposing a sparsity constraint, "shrinking" towards a prescribed target, or attenuating small correlations. We propose an alternate technique that regularizes the small-sample covariance by imposing hierarchical rank structure. Compared to regularization methods that assume sparsity such as spatial localization, hierarchical rank structure accommodates a wider range of covariance matrices, roughly corresponding to situations where long-range correlations vary more smoothly than short-range ones. It also results in a data-sparse matrix format that permits highly efficient matrix-vector products. We present theory and algorithms which show how to efficiently estimate a high-dimensional, hierarchically rank structured covariance matrix from limited samples. Through an error analysis and numerical experiments with a variety of model problems, we demonstrate that these techniques are effective at reducing sampling errors, and that in many cases they achieve smaller estimation error than conventional techniques.

stat.CO

Optimal Slice-Adaptive Tuning of Hybrid Slice Sampling

Slice sampling is a Markov chain Monte Carlo algorithm that draws its next state uniformly from a "slice"---a super-level set of the target density function---at each iteration, thereby providing automatic local adaptivity to the scale of the target. In practice the exact slice is not known, so general-purpose implementations use an approximate slice that is grown from a starting interval of length $w>0$, with a computational cost that depends on $w$. This work presents an analysis of the average per-iteration number of target density evaluations, as a function of $w$, of hybrid slice sampling with various slice-finding schemes for targets with contiguous slices. The paper uses the results of the analysis to develop automated, slice-adaptive tuning schemes along with suboptimality bounds and asymptotic convergence guarantees. Simulations demonstrate that the tuning schemes reliably yield near-optimal slice-adaptive tuning with essentially no dependence on the initial setting of $w$.

stat.CO