SearcharxivSearch

arXiv · 2508.10694

Effective permeability conditions for diffusive transport through impermeable membranes with gaps

Abstract

Membranes regulate transport in a wide variety of industrial and biological applications. The microscale geometry of the membrane can significantly affect overall transport through the membrane, but the precise nature of this multiscale coupling is not well characterised in general. Motivated by the application of transport across a bacterial membrane, in this paper we use formal multiscale analysis to derive explicit effective coupling conditions for macroscale transport across a two-dimensional impermeable membrane with periodically spaced gaps, and validate these with numerical simulations. We derive analytic expressions for effective macroscale quantities associated with the membrane, such as the permeability, in terms of the microscale geometry. Our results generalise the classic constitutive membrane coupling conditions to a wider range of membrane geometries and time-varying scenarios. Specifically, we demonstrate that if the exterior concentration varies in time, for membranes with long channels, the transport gains a memory property where the coupling conditions depend on the system history. By applying our effective conditions in the context of small molecule transport through gaps in bacterial membranes called porins, we predict that bacterial membrane permeability is primarily dominated by the thickness of the membrane. Furthermore, we predict how alterations to membrane microstructure, for example via changes to porin expression, might affect overall transport, including when external concentrations vary in time. These results will apply to a broad range of physical applications with similar membrane structures, from medical and industrial filtration to carbon capture.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Molly Brennan, Edwina F. Yeo, Philip Pearce, Mohit P. Dalwadi. 2025-08-14. Effective permeability conditions for diffusive transport through impermeable membranes with gaps. https://arxiv.org/abs/2508.10694

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

Slow Dynamics and the Geometry of Jammed Packings

Saddle points in the energy landscape of granular packings dominate the discrete steepest descent dynamics and ultimately determine the path that an out of mechanical equilibrium packing will follow and the resulting stable minimum that it will find. The saddle points that ultimately determine the resulting minima tend to be low-index saddle points. For models with an analytic energy landscape, such as the $p$-spin model, the steepest descent minimization path is affected by higher-index saddle points, which pull the system towards saddle points of decreasing index before arriving at the minima. Here, we examine the steepest descent minimization path of granular packings and compare them to the $p$-spin model. We show that the granular packing steepest descent minimization paths act like their smooth energy landscape counterparts and get attracted by saddle points. The index versus time curves for all models follow a shifted, stretched exponential. We further show that the shape parameter for the granular packings is unchanged when the energy landscape is modified to become analytic (Gaussian potential in a harmonic well) or non-local (Mari-Krzakala-Kurchan). The $p$-spin, on the other hand, has a significantly larger shape parameter. The reason is not due to the dimensionality, packing fraction, nonanalyticity, or the locality of the Hamiltonian of the models. The exact reason for the discrepancy in the shape parameter is \st{still} an unsolved mystery.

cond-mat.soft

A Phase-Field Study of Desiccation Crack Pattern Maturation under Drying-Wetting Cycles

The characteristic intersection angle of the desiccation crack relaxes from near \ang{90} toward \ang{120} under repeated drying--wetting cycles. However, the theoretical understanding of this relaxation is insufficient, especially the modeling of the drying--wetting cycles. Here we introduce a phase-field model of desiccation fracture, extending the model proposed in previous studies by adding crack healing and a scar effect left by past cracks. By repeating drying--wetting cycles in a finite element simulation, we find that the angle distribution develops a growing peak near \ang{120} as the cycle number increases, consistent with experiments. The standard deviation of the intersection angle from \ang{120} relaxes exponentially with a characteristic time of about 2.85 cycles. These results are consistent with experiments, except that the characteristic time is slightly smaller than the experimental value. Crack energy dominates the total energy and also relaxes exponentially with nearly the same characteristic cycle as the angle relaxation. This decay is driven mainly by a shortening of the effective crack length rather than a change in effective fracture toughness.

cond-mat.soft

Kinetics of ferritin crystal formation and melting in acoustically levitated droplets

Understanding protein crystallization pathways is essential for controlling crystallization in structural biology, materials science, and pharmaceutical applications. Classical nucleation theory does not fully capture crystallization processes for several proteins, including ferritin. Here, we combine acoustic levitation with small- and wide-angle X-ray scattering (SAXS and WAXS) to monitor ferritin crystallization in evaporating aqueous polyethylene glycol (PEG) solutions. Acoustic levitation rapidly drives the droplets through a broad range of protein and polymer concentrations, enabling time-resolved measurements of crystallization during evaporation. The scattering data show that ferritin crystals form during evaporation and subsequently lose their crystalline order upon further dehydration. Varying the PEG molecular weight switches between distinct crystallization pathways: one dominated by attractive protein-protein interactions and another dominated by repulsive interactions and excluded-volume effects. Furthermore, we find that lower molecular weight PEG (1000 g/mol) suppresses the dehydration-induced loss of crystalline order observed for higher molecular weight PEG (6000 g/mol), providing a simple strategy for improving protein crystal stability.

cond-mat.soft