High-resolution single-molecule mass measurement of megadalton assemblies in solution

Tereza Roesel; Evangelos Efraimidis; Niklas Hansen; Yulia Yancheva; Miroslav Hekrdla; Katarzyna M. Tych; Vladimira Petrakova; Barbora Spackova

arXiv · 2607.14283

High-resolution single-molecule mass measurement of megadalton assemblies in solution

Tereza Roesel·Evangelos Efraimidis·Niklas Hansen·Yulia Yancheva·Miroslav Hekrdla·Katarzyna M. Tych·Vladimira Petrakova·Barbora Spackova

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Abstract

Resolving heterogeneity in megadalton assemblies requires precise single-molecule mass measurements in solution. Mass photometry infers mass from individual molecular surface-landing events, and event-to-event measurement variability limits precision. Nanofluidic scattering microscopy overcomes this limitation by continuously tracking molecules in motion, enabling repeated sampling and temporal averaging of these fluctuations. Benchmarking with 4.5 MDa DNA origami demonstrates up to a fourfold improved resolution, approaching the performance of ensemble-averaged native mass spectrometry.

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Tereza Roesel, Evangelos Efraimidis, Niklas Hansen, Yulia Yancheva, Miroslav Hekrdla, Katarzyna M. Tych, Vladimira Petrakova, Barbora Spackova. 2026-07-15. High-resolution single-molecule mass measurement of megadalton assemblies in solution. https://arxiv.org/abs/2607.14283

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