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Nonextensive Statistical Mechanics Application to Vibrational Dynamics of Protein Folding

E. Akturk·H. Arkin Olgar
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Abstract

The vibrational dynamics of protein folding is analyzed in the framework of Tsallis thermostatistics. The generalized partition functions, internal energies, free energies and temperature factor (or Debye-Waller factor) are calculated. It has also been observed that the temperature factor is dependent on the non-extensive parameter q which behaves like a scale parameter in the harmonic oscillator model. As $q\to 1$, we also show that these approximations agree with the result of Gaussian network model.

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BibTeXRIS

E. Akturk, H. Arkin Olgar. 2007-09-24. Nonextensive Statistical Mechanics Application to Vibrational Dynamics of Protein Folding. https://doi.org/10.1007/s10773-007-9407-1

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