arXiv subjects

A. Lamura

Publications and source records attributed to A. Lamura.

At least 19 recordsLinked to original sources

arXiv2026

Two-dimensional active polar semiflexible polymer under shear flow

The nonequilibrium structural and dynamical properties of semiflexible active polar polymers subject to linear flow are studied by numerical simulations. Filaments are confined in two dimensions and immersed in a fluid described by the Brownian Multiparticle Collision Dynamics approach. The applied shear flow causes conformational changes of a polymer, aligns it along the flow direction, and induces a tumbling motion at large flow rates. In an intermediate, activity-dependent shear-rate regime, a characteristic scaling exponent for the mean-square end-to-end distance along the gradient direction is observed. This exponent appears to be determined by the semiflexibility of the polymer. The tumbling dynamics exhibits a characteristic time, with a stronger dependence on the Weissenberg number than that of flexible active or passive polymers. Activity strongly impacts the rheological properties of the semiflexible polymers, and even implies a negative viscosity for weak flows. At very large values of the shear rate, shear dominates over activity and passive-polymer behavior is assumed.

cond-mat.soft↗

arXiv2025

Dynamical behavior of compound vesicles in wall-bounded shear flow

We report a numerical study addressing the dynamics of compound vesicles confined in a channel under shear flow. The system comprises a smaller vesicle embedded within a larger one and can be used to mimic, for example, leukocytes or nucleate cells. A two-dimensional model, which combines molecular dynamics and mesoscopic hydrodynamics including thermal fluctuations, is adopted to perform an extended investigation. We are able to vary independently the swelling degree and the relative size of vesicles, the viscosities of fluids internal and external to vesicles, and the Capillary number, so to observe a rich dynamical phenomenology which goes well beyond what observed for single vesicles, matching quantitatively with experimental findings. Tank-treading, tumbling, and trembling motions are enriched by dynamical states where inner and outer vesicles can perform different motions. We show that thermal fluctuations are crucial during trembling and swinging dynamics, as observed in experiments. Undulating motion of the external vesicle, characterized by periodic oscillation of the inclination and buckling of the membrane, is observed at high filling fractions. This latter state exhibits features that are shown to depend on the relative size, the swelling degree of both vesicles as well as on thermal noise lacking in previous analytical and numerical studies.

cond-mat.soft↗

arXiv2025

Phase segregation of liquid-vapor systems with a gravitational field

Phase separation in the presence of external forces has attracted considerable attention since the initial works for solid mixtures. Despite this, only very few studies are available which address the segregation process of liquid-vapor systems under gravity. We present here an extensive study which takes into account both hydrodynamic and gravitational effects on the coarsening dynamics. An isothermal formulation of a lattice Boltzmann model for a liquid-vapor system with the van der Waals equation of state is adopted. In the absence of gravity, the growth of domains follows a power law with the exponent $2/3$ of the inertial regime. The external force deeply affects the observed morphology accelerating the coarsening of domains and favoring the liquid accumulation at the bottom of the system. Along the force direction, the growth exponent is found to increase with the gravity strength still preserving sharp interfaces since the Porod's law is found to be verified. The time evolution of the average thickness $L$ of the layers of accumulated material at confining walls shows a transition from an initial regime where $L \simeq t^{2/3}$ ($t$: time) to a late-time regime $L \simeq g t^{5/3}$ with $g$ the gravitational acceleration. The final steady state, made of two overlapped layers of liquid and vapor, shows a density profile in agreement with theoretical predictions.

cond-mat.soft↗

arXiv2024

Tethered flexible polymer under oscillatory linear flow

The non-equilibrium structural and dynamical properties of a flexible polymer tethered to a reflecting wall and subject to oscillatory linear flow are studied by numerical simulations. Polymer is confined in two dimensions and is modeled as a bead-spring chain immersed in a fluid described by the Brownian multiparticle collision dynamics. At high strain, the polymer is stretched along the flow direction following the applied flow, then recoils at flow inversion before flipping and elongate again. When strain is reduced, it may happen that the chain recoils without flipping when the applied shear changes sign. Conformations are analyzed and compared to stiff polymers revealing more compact patterns at low strains and less stretched configurations at high strain. The dynamics is investigated by looking at the center-of-mass motion which shows a frequency doubling along the direction normal to the external flow. The center-of-mass correlation function is characterized by smaller amplitudes when reducing bending rigidity.

cond-mat.soft↗

arXiv2024

Excluded volume effects on tangentially driven active ring polymers

The conformational and dynamical properties of active ring polymers are studied by numerical simulations. The two-dimensionally confined polymer is modeled as a closed bead-spring chain, driven by tangential forces, put in contact with a heat bath described by the Brownian multiparticle collision dynamics. Both phantom polymers and chains comprising excluded volume interactions are considered for different bending rigidities. The size and shape are found to be dependent on persistence length, driving force, and bead mutual exclusion. The lack of excluded volume interactions is responsible for a shrinkage of active rings when increasing driving force in the flexible limit while the presence induces a moderate swelling of chains. Internal dynamics of flexible phantom active rings shows activity-enhanced diffusive behavior at large activity values while, in the case of self-avoiding active chains, it is characterized by active ballistic motion not depending on stiffness. The long-time dynamics of active rings is marked by rotational motion whose period scales as the inverse of the applied tangential force, irrespective of persistence length and beads self-exclusion.

cond-mat.soft↗

arXiv2022

Self-attractive semiflexible polymers under an external force field

The dynamical response of a tethered semiflexible polymer with self-attractive interactions and subjected to an external force field is numerically investigated by varying stiffness and self-interaction strength. The chain is confined in two spatial dimensions and placed in contact with a heat bath described by the Brownian multiparticle collision method. For strong self-attraction the equilibrium conformations range from compact structures to double-stranded chains, and to rods when increasing the stiffness. Under the external field at small rigidities, the initial close-packed chain is continuously unwound by the force before being completely elongated. For double-stranded conformations the transition from the folded state to the open one is sharp being steeper for larger stiffnesses. The discontinuity in the transition appears in the force-extension relation as well as in the probability distribution function of the gyration radius. The relative deformation with respect to the equilibrium case along the direction normal to the force is found to decay as the inverse of the applied force.

cond-mat.soft↗

arXiv2022

Numerical study of a confined vesicle in shear flow at finite temperature

The dynamics and rheology of a vesicle confined in a channel under shear flow are studied at finite temperature. The effect of finite temperature on vesicle motion and system viscosity is investigated. A two-dimensional numerical model, which includes thermal fluctuations and is based on a combination of molecular dynamics and mesoscopic hydrodynamics, is used to perform a detailed analysis in a wide range of the Peclet numbers (the ratio of the shear rate to the rotational diffusion coefficient). The suspension viscosity is found to be a monotonous increasing function of the viscosity contrast (the ratio of the viscosity of the encapsulated fluid to that of the surrounding fluid) both in the tank-treading and the tumbling regime due to the interplay of different temperature-depending mechanisms. Thermal effects induce shape and inclination fluctuations of the vesicle which experiences also Brownian diffusion across the channel increasing the viscosity. These effects reduces when increasing the Peclet number.

cond-mat.soft↗

arXiv2022

Lattice Boltzmann modeling of cholesteric liquid crystal droplets under an oscillatory electric field

We numerically study the dynamics of quasi-two dimensional cholesteric liquid crystal droplets in the presence of a time-dependent electric field, rotating at constant angular velocity. A surfactant sitting at droplet interface is also introduced to prevent droplet coalescence. The dynamics is modeled following a hybrid numerical approach, where a standard lattice Boltzmann technique solves the Navier-Stokes equation and a finite difference scheme integrates the evolution equations of liquid crystal and surfactant. Our results show that, once the field is turned on, the liquid crystal rotates coherently triggering a concurrent orbital motion of both droplets around each other, an effect due to the momentum transfer to the surrounding fluid. In addition the topological defects, resulting from the conflict orientation of the liquid crystal within the drops, exhibit a chaotic-like motion in cholesterics with a high pitch, in contrast with a regular one occurring along circular trajectories observed in nematics drops. Such behavior is found to depend on magnitude and frequency of the applied field as well as on the anchoring of the liquid crystal at the droplet interface. These findings are quantitatively evaluated by measuring the angular velocity of fluid and drops for various frequencies of the applied field.

cond-mat.soft↗

arXiv2021

Sheared phase-separating binary mixtures with surface diffusion

The phase-separation process of a binary mixture with order-parameter-dependent mobility under shear flow is numerically studied. The ordering is characterized by an alternate stretching and bursting of domains which produce oscillations in the physical observables. The amplitude of such modulations reduce in time when the mobility vanishes in the bulk phase, disfavoring the growth of bubbles coming from bursted domains. We propose two equations for the typical sizes $R_x$ and $R_y$ of domains finding the long-time behaviors $R_x \sim t^{5/4}$ and $R_y \sim t^{1/4}$ in the flow and shear directions, respectively, in the case of surface diffusion. A reduction of the excess viscosity with increasing shear rate is observed in simulations.

cond-mat.soft↗

arXiv2021

Shearing effects on the phase coarsening of binary mixtures using the Active Model B

The phase separation of a two-dimensional active binary mixture is studied under the action of an applied shear through numerical simulations. It is highlighted how the strength of the external flow modifies the initial shape of growing domains. The activity is responsible for the formation of isolated droplets which affect both the coarsening dynamics and the morphology of the system. The characteristic dimensions of domains along the flow and the shear direction are modulated in time by oscillations whose amplitudes are reduced when the activity increases. This induces a broadening of the distribution functions of domain lengths with respect to the passive case due to the presence of dispersed droplets of different sizes.

cond-mat.soft↗

arXiv2020

Soft channel formation and symmetry breaking in exotic active emulsions

We use computer simulations to study the morphology and rheological properties of a bidimensional emulsion resulting from a mixture of a passive isotropic fluid and an active contractile polar gel, in the presence of a surfactant that favours the emulsification of the two phases. By varying the intensity of the contractile activity and of an externally imposed shear flow, we find three possible morphologies. For low shear rates, a simple lamellar state is obtained. For intermediate activity and shear rate, an asymmetric state emerges, which is characterized by shear and concentration banding at the polar/isotropic interface. A further increment in the active forcing leads to the self-assembly of a soft channel where an isotropic fluid flows between two layers of active material. We characterize the stability of this state by performing a dynamical test varying the intensity of the active forcing and shear rate. Finally, we address the rheological properties of the system by measuring the effective shear viscosity, finding that this increases as active forcing is increased, so that the fluid thickens with activity.

cond-mat.soft↗

arXiv2018

Corner transport upwind lattice Boltzmann model for bubble cavitation

Aiming to study the bubble cavitation problem in quiescent and sheared liquids, a third-order isothermal lattice Boltzmann (LB) model that describes a two-dimensional ($2D$) fluid obeying the van der Waals equation of state, is introduced. The evolution equations for the distribution functions in this off-lattice model with 16 velocities are solved using the corner transport upwind (CTU) numerical scheme on large square lattices (up to $6144 \times 6144$ nodes). The numerical viscosity and the regularization of the model are discussed for first and second order CTU schemes finding that the latter choice allows to obtain a very accurate phase diagram of a nonideal fluid. In a quiescent liquid, the present model allows to recover the solution of the $2D$ Rayleigh-Plesset equation for a growing vapor bubble. In a sheared liquid, we investigated the evolution of the total bubble area, the bubble deformation and the bubble tilt angle, for various values of the shear rate. A linear relation between the dimensionless deformation coefficient $D$ and the capillary number $Ca$ is found at small $Ca$ but with a different factor than in equilibrium liquids. A non-linear regime is observed for $Ca \gtrsim 0.2$.

physics.comp-ph↗

arXiv2017

Lattice Boltzmann study of chemically-driven self-propelled droplets

We numerically study the behavior of self-propelled liquid droplets whose motion is triggered by a Marangoni-like flow. This latter is generated by variations of surfactant concentration which affect the droplet surface tension promoting its motion. In the present paper a model for droplets with a third amphiphilic component is adopted. The dynamics is described by Navier-Stokes and convection-diffusion equations, solved by lattice Boltzmann method coupled with finite-difference schemes. We focus on two cases. First the study of self-propulsion of an isolated droplet is carried on and, then, the interaction of two self-propelled droplets is investigated. In both cases, when the surfactant migrates towards the interface, a quadrupolar vortex of the velocity field forms inside the droplet and causes the motion. A weaker dipolar field emerges instead when the surfactant is mainly diluted in the bulk. The dynamics of two interacting droplets is more complex and strongly depends on their reciprocal distance. If, in a head-on collision, droplets are close enough, the velocity field initially attracts them until a motionless steady state is achieved. If the droplets are vertically shifted, the hydrodynamic field leads to an initial reciprocal attraction followed by a scattering along opposite directions. This hydrodynamic interaction acts on a separation of some droplet radii otherwise it becomes negligible and droplets motion is only driven by Marangoni effect. Finally, if one of the droplets is passive, this latter is generally advected by the fluid flow generated by the active one.

cond-mat.soft↗

arXiv2016

Cavitation inception of a van der Waals fluid at a sack-wall obstacle

Cavitation in a liquid moving past a constraint is numerically investigated by means of a free-energy lattice Boltzmann simulation based on the van der Waals equation of state. The fluid is streamed past an obstacle and, depending on the pressure drop between inlet and outlet, vapor formation underneath the corner of the sack-wall is observed. The circumstances of cavitation formation are investigated and it is found that the local bulk pressure and mean stress are insufficient to explain the phenomenon. Results obtained in this study strongly suggest that the viscous stress, interfacial contributions to the local pressure, and the Laplace pressure are relevant to the opening of a vapor cavity. This can be described by a generalization of Joseph's criterion that includes these contributions. A macroscopic investigation measuring mass flow rate behavior and discharge coefficient was also performed. As theoretically predicted, mass flow rate increases linearly with the square root of the pressure drop. However, when cavitation occurs, the mass flow growth rate is reduced and eventually it collapses into a choked flow state. In the cavitating regime, as theoretically predicted and experimentally verified, the discharge coefficient grows with the Nurick cavitation number.

physics.flu-dyn↗

arXiv2014

Rheological properties of sheared vesicle and cell suspensions

Numerical simulations of vesicle suspensions are performed in two dimensions to study their dynamical and rheological properties. An hybrid method is adopted, which combines a mesoscopic approach for the solvent with a curvature-elasticity model for the membrane. Shear flow is induced by two counter-sliding parallel walls, which generate a linear flow profile. The flow behavior is studied for various vesicle concentrations and viscosity ratios between the internal and the external fluid. Both the intrinsic viscosity and the thickness of depletion layers near the walls are found to increase with increasing viscosity ratio.

cond-mat.soft↗

arXiv2013

Dynamics and Rheology of Vesicle Suspensions in Wall-Bounded Shear Flow

The dynamics and rheology of suspensions of fluid vesicles or red blood cells is investigated by a combination of molecular dynamics and mesoscale hydrodynamics simulations in two dimensions. The vesicle suspension is confined between two no-slip walls, which are driven externally to generate a shear flow with shear rate $\dotγ$. The flow behavior is studied as a function of $\dotγ$, the volume fraction of vesicles, and the viscosity contrast between inside and outside fluids. Results are obtained for the encounter and interactions of two vesicles, the intrinsic viscosity of the suspension, and the cell-free layer near the walls.

cond-mat.soft↗

arXiv2012

Semiflexible polymers under external fields confined to two dimensions

The non-equilibrium structural and dynamical properties of semiflexible polymers confined to two dimensions are investigated by molecular dynamics simulations. Three different scenarios are considered: The force-extension relation of tethered polymers, the relaxation of an initially stretched semiflexible polymer, and semiflexible polymers under shear flow. We find quantitative agreement with theoretical predictions for the force-extension relation and the time dependence of the entropically contracting polymer. The semiflexible polymers under shear flow exhibit significant conformational changes at large shear rates, where less stiff polymers are extended by the flow, whereas rather stiff polymers are contracted. In addition, the polymers are aligned by the flow, thereby the two-dimensional semiflexible polymers behave similarly to flexible polymers in three dimensions. The tumbling times display a power-law dependence at high shear rate rates with an exponent comparable to the one of flexible polymers in three-dimensional systems.

cond-mat.soft↗

arXiv2011

Thermal and hydrodynamic effects in the ordering of lamellar fluids

Phase separation in a complex fluid with lamellar order has been studied in the case of cold thermal fronts propagating diffusively from external walls. The velocity hydrodynamic modes are taken into account by coupling the convection-diffusion equation for the order parameter to a generalised Navier-Stokes equation. The dynamical equations are simulated by implementing a hybrid method based on a lattice Boltzmann algorithm coupled to finite difference schemes. Simulations show that the ordering process occurs with morphologies depending on the speed of the thermal fronts or, equivalently, on the value of the thermal conductivity ξ. At large value of ξ, as in instantaneous quenching, the system is frozen in entangled configurations at high viscosity while consists of grains with well ordered lamellae at low viscosity. By decreasing the value of ξ, a regime with very ordered lamellae parallel to the thermal fronts is found. At very low values of ξ the preferred orientation is perpendicular to the walls in d = 2, while perpendicular order is lost moving far from the walls in d = 3.

cond-mat.soft↗