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Aleksandr Y. Aravkin

Publications and source records attributed to Aleksandr Y. Aravkin.

At least 19 recordsLinked to original sources

A Proximal Method for Composite Optimization with Smooth and Convex Components

We introduce prox-convex for minimizing $F(x)=g(x)+h(C(x))+s(R(x))$, where $g$ and $h$ are convex, $C$ and $s$ are smooth, and each component of $R$ is convex (possibly nonsmooth). Here $g$ captures general convex objectives and indicator functions for convex constraints, while the composite template simultaneously models convex penalties on smooth features $(h \circ C)$ and smooth couplings of convex (possibly nonsmooth) features $(s \circ R)$. Each prox-convex step forms a convex subproblem by linearizing only the smooth maps while preserving the existing convex structure. The resulting subproblem is made strongly convex with the proximal metric $Q_k=μ_k I+H_k^+ \succ 0$ where $μ_k$ is adapted using an implicit trust-region strategy, and $H_k^+ \succeq 0$ is an optional curvature term for local acceleration. Under mild Lipschitz/smoothness and a per-coordinate monotone-or-smooth condition, we prove subdifferential regularity, derive two-sided quadratic model error bounds with explicit constants, and obtain sufficient decrease with $O(\varepsilon^{-2})$ complexity for driving the norm of the metric prox-gradient below $\varepsilon$. Furthermore, a local error-bound condition for $F$ guarantees a metric step-size error bound and hence local $Q$-linear convergence of the function values. Using the Taylor-like model framework of Drusvyatskiy, Ioffe, and Lewis, we show that every cluster point of the iterates is limiting-stationary; under our regularity conditions, this further implies Fréchet stationarity. The same framework also establishes robustness to inexact subproblem solves and justifies a model-decrease termination rule.

math.OC↗

Sparse-mode Dynamic Mode Decomposition for Disambiguating Local and Global Structures

The dynamic mode decomposition (DMD) is a data-driven approach that extracts the dominant features from spatiotemporal data. In this work, we introduce sparse-mode DMD, a new variant of the optimized DMD framework that specifically leverages sparsity-promoting regularization in order to approximate DMD modes which have localized spatial structure. The algorithm maintains the noise-robust properties of optimized DMD while disambiguating between modes which are spatially local versus global in nature. In many applications, such modes are associated with discrete and continuous spectra respectively, thus allowing the algorithm to explicitly construct, in an unsupervised manner, the distinct portions of the spectrum. We demonstrate this by analyzing synthetic and real-world systems, including examples from optical waveguides, quantum mechanics, and sea surface temperature data.

stat.ML↗

A Levenberg-Marquardt Method for Nonsmooth Regularized Least Squares

We develop a Levenberg-Marquardt method for minimizing the sum of a smooth nonlinear least-squar es term $f(x) = \tfrac{1}{2} \|F(x)\|_2^2$ and a nonsmooth term $h$. Both $f$ and $h$ may be nonconvex. Steps are computed by minimizing the sum of a regularized linear least-squares model and a model of $h$ using a first-order method such as the proximal gradient method. We establish global convergence to a first-order stationary point of both a trust-region and a regularization variant of the Levenberg-Marquardt method under the assumptions that $F$ and its Jacobian are Lipschitz continuous and $h$ is proper and lower semi-continuous. In the worst case, both methods perform $O(ε^{-2})$ iterations to bring a measure of stationarity below $ε\in (0, 1)$. We report numerical results on three examples: a group-lasso basis-pursuit denoise example, a nonlinear support vector machine, and parameter estimation in neuron firing. For those examples to be implementable, we describe in detail how to evaluate proximal operators for separable $h$ and for the group lasso with trust-region constraint. In all cases, the Levenberg-Marquardt methods perform fewer outer iterations than a proximal-gradient method with adaptive step length and a quasi-Newton trust-region method, neither of which exploit the least-squares structure of the problem. Our results also highlight the need for more sophisticated subproblem solvers than simple first-order methods.

math.OC↗

A Proximal Quasi-Newton Trust-Region Method for Nonsmooth Regularized Optimization

We develop a trust-region method for minimizing the sum of a smooth term $f$ and a nonsmooth term $h$), both of which can be nonconvex. Each iteration of our method minimizes a possibly nonconvex model of $f + h$ in a trust region. The model coincides with $f + h$ in value and subdifferential at the center. We establish global convergence to a first-order stationary point when $f$ satisfies a smoothness condition that holds, in particular, when it has Lipschitz-continuous gradient, and $h$ is proper and lower semi-continuous. The model of $h$ is required to be proper, lower-semi-continuous and prox-bounded. Under these weak assumptions, we establish a worst-case $O(1/ε^2)$ iteration complexity bound that matches the best known complexity bound of standard trust-region methods for smooth optimization. We detail a special instance, named TR-PG, in which we use a limited-memory quasi-Newton model of $f$ and compute a step with the proximal gradient method, resulting in a practical proximal quasi-Newton method. We establish similar convergence properties and complexity bound for a quadratic regularization variant, named R2, and provide an interpretation as a proximal gradient method with adaptive step size for nonconvex problems. R2 may also be used to compute steps inside the trust-region method, resulting in an implementation named TR-R2. We describe our Julia implementations and report numerical results on inverse problems from sparse optimization and signal processing. Both TR-PG and TR-R2 exhibit promising performance and compare favorably with two linesearch proximal quasi-Newton methods based on convex models.

math.OC↗

l1-Norm Minimization with Regula Falsi Type Root Finding Methods

Sparse level-set formulations allow practitioners to find the minimum 1-norm solution subject to likelihood constraints. Prior art requires this constraint to be convex. In this letter, we develop an efficient approach for nonconvex likelihoods, using Regula Falsi root-finding techniques to solve the level-set formulation. Regula Falsi methods are simple, derivative-free, and efficient, and the approach provably extends level-set methods to the broader class of nonconvex inverse problems. Practical performance is illustrated using l1-regularized Student's t inversion, which is a nonconvex approach used to develop outlier-robust formulations.

math.OC↗

Estimating Shape Parameters of Piecewise Linear-Quadratic Problems

Piecewise Linear-Quadratic (PLQ) penalties are widely used to develop models in statistical inference, signal processing, and machine learning. Common examples of PLQ penalties include least squares, Huber, Vapnik, 1-norm, and their asymmetric generalizations. Properties of these estimators depend on the choice of penalty and its shape parameters, such as degree of asymmetry for the quantile loss, and transition point between linear and quadratic pieces for the Huber function. In this paper, we develop a statistical framework that can help the modeler to automatically tune shape parameters once the shape of the penalty has been chosen. The choice of the parameter is informed by the basic notion that each QS penalty should correspond to a true statistical density. The normalization constant inherent in this requirement helps to inform the optimization over shape parameters, giving a joint optimization problem over these as well as primary parameters of interest. A second contribution is to consider optimization methods for these joint problems. We show that basic first-order methods can be immediately brought to bear, and design specialized extensions of interior point (IP) methods for PLQ problems that can quickly and efficiently solve the joint problem. Synthetic problems and larger-scale practical examples illustrate the potential of the approach.

stat.ML↗

Sparse Principal Component Analysis via Variable Projection

Sparse principal component analysis (SPCA) has emerged as a powerful technique for modern data analysis, providing improved interpretation of low-rank structures by identifying localized spatial structures in the data and disambiguating between distinct time scales. We demonstrate a robust and scalable SPCA algorithm by formulating it as a value-function optimization problem. This viewpoint leads to a flexible and computationally efficient algorithm. Further, we can leverage randomized methods from linear algebra to extend the approach to the large-scale (big data) setting. Our proposed innovation also allows for a robust SPCA formulation which obtains meaningful sparse principal components in spite of grossly corrupted input data. The proposed algorithms are demonstrated using both synthetic and real world data, and show exceptional computational efficiency and diagnostic performance.

stat.ML↗

Trimmed Constrained Mixed Effects Models: Formulations and Algorithms

Mixed effects (ME) models inform a vast array of problems in the physical and social sciences, and are pervasive in meta-analysis. We consider ME models where the random effects component is linear. We then develop an efficient approach for a broad problem class that allows nonlinear measurements, priors, and constraints, and finds robust estimates in all of these cases using trimming in the associated marginal likelihood. The software accompanying this paper is disseminated as an open-source Python package called LimeTr. LimeTr is able to recover results more accurately in the presence of outliers compared to available packages for both standard longitudinal analysis and meta-analysis, and is also more computationally efficient than competing robust alternatives. Supplementary materials that reproduce the simulations, as well as run LimeTr and third party code are available online. We also present analyses of global health data, where we use advanced functionality of LimeTr, including constraints to impose monotonicity and concavity for dose-response relationships. Nonlinear observation models allow new analyses in place of classic approximations, such as log-linear models. Robust extensions in all analyses ensure that spurious data points do not drive our understanding of either mean relationships or between-study heterogeneity.

stat.ME↗

Data-Driven Aerospace Engineering: Reframing the Industry with Machine Learning

Data science, and machine learning in particular, is rapidly transforming the scientific and industrial landscapes. The aerospace industry is poised to capitalize on big data and machine learning, which excels at solving the types of multi-objective, constrained optimization problems that arise in aircraft design and manufacturing. Indeed, emerging methods in machine learning may be thought of as data-driven optimization techniques that are ideal for high-dimensional, non-convex, and constrained, multi-objective optimization problems, and that improve with increasing volumes of data. In this review, we will explore the opportunities and challenges of integrating data-driven science and engineering into the aerospace industry. Importantly, we will focus on the critical need for interpretable, generalizeable, explainable, and certifiable machine learning techniques for safety-critical applications. This review will include a retrospective, an assessment of the current state-of-the-art, and a roadmap looking forward. Recent algorithmic and technological trends will be explored in the context of critical challenges in aerospace design, manufacturing, verification, validation, and services. In addition, we will explore this landscape through several case studies in the aerospace industry. This document is the result of close collaboration between UW and Boeing to summarize past efforts and outline future opportunities.

cs.LG↗

A unified sparse optimization framework to learn parsimonious physics-informed models from data

Machine learning (ML) is redefining what is possible in data-intensive fields of science and engineering. However, applying ML to problems in the physical sciences comes with a unique set of challenges: scientists want physically interpretable models that can (i) generalize to predict previously unobserved behaviors, (ii) provide effective forecasting predictions (extrapolation), and (iii) be certifiable. Autonomous systems will necessarily interact with changing and uncertain environments, motivating the need for models that can accurately extrapolate based on physical principles (e.g. Newton's universal second law for classical mechanics, $F=ma$). Standard ML approaches have shown impressive performance for predicting dynamics in an interpolatory regime, but the resulting models often lack interpretability and fail to generalize. We introduce a unified sparse optimization framework that learns governing dynamical systems models from data, selecting relevant terms in the dynamics from a library of possible functions. The resulting models are parsimonious, have physical interpretations, and can generalize to new parameter regimes. Our framework allows the use of non-convex sparsity promoting regularization functions and can be adapted to address key challenges in scientific problems and data sets, including outliers, parametric dependencies, and physical constraints. We show that the approach discovers parsimonious dynamical models on several example systems. This flexible approach can be tailored to the unique challenges associated with a wide range of applications and data sets, providing a powerful ML-based framework for learning governing models for physical systems from data.

physics.comp-ph↗

Physics-informed machine learning for sensor fault detection with flight test data

We develop data-driven algorithms to fully automate sensor fault detection in systems governed by underlying physics. The proposed machine learning method uses a time series of typical behavior to approximate the evolution of measurements of interest by a linear time-invariant system. Given additional data from related sensors, a Kalman observer is used to maintain a separate real-time estimate of the measurement of interest. Sustained deviation between the measurements and the estimate is used to detect anomalous behavior. A decision tree, informed by integrating other sensor measurement values, is used to determine the amount of deviation required to identify a sensor fault. We validate the method by applying it to three test systems exhibiting various types of sensor faults: commercial flight test data, an unsteady aerodynamics model with dynamic stall, and a model for longitudinal flight dynamics forced by atmospheric turbulence. In the latter two cases we test fault detection for several prototypical failure modes. The combination of a learned dynamical model with the automated decision tree accurately detects sensor faults in each case.

eess.SY↗

Dimensionality Reduction and Reduced Order Modeling for Traveling Wave Physics

We develop an unsupervised machine learning algorithm for the automated discovery and identification of traveling waves in spatio-temporal systems governed by partial differential equations (PDEs). Our method uses sparse regression and subspace clustering to robustly identify translational invariances that can be leveraged to build improved reduced order models (ROMs). Invariances, whether translational or rotational, are well known to compromise the ability of ROMs to produce accurate and/or low-rank representations of the spatio-temporal dynamics. However, by discovering translations in a principled way, data can be shifted into a coordinate systems where quality, low-dimensional ROMs can be constructed. This approach can be used on either numerical or experimental data with or without knowledge of the governing equations. We demonstrate our method on a variety of PDEs of increasing difficulty, taken from the field of fluid dynamics, showing the efficacy and robustness of the proposed approach.

physics.comp-ph↗

A Proof of Principle: Multi-Modality Radiotherapy Optimization

Radiotherapy is used to treat cancer patients by damaging DNA of tumor cells using ionizing radiation. Photons are the most widely used radiation type for therapy, having been put into use soon after the first discovery of X-rays in 1895. However, there are emerging interests and developments of other radiation modalities such as protons and carbon ions, owing to their unique biological and physical characteristics that distinguish these modalities from photons. Current attempts to determine an optimal radiation modality or an optimal combination of multiple modalities are empirical and in the early stage of development. In this paper, we propose a mathematical framework to optimize full radiation dose distributions and fractionation schedules of multiple radiation modalities, aiming to maximize the damage to the tumor while limiting the damage to the normal tissue to the corresponding tolerance level. This formulation gives rise to a non-convex, mixed integer program and we propose a bilevel optimization algorithm, to efficiently solve it. The upper level problem is to optimize the fractionation schedule using the dose distribution optimized in the lower level. We demonstrate the feasibility of our novel framework and algorithms in a simple 2-dimensional phantom with two different radiation modalities, where clinical intuition can be easily drawn. The results of our numerical simulations agree with the clinical intuition, validating our approach and showing the promise of the framework for further clinical investigation.

math.OC↗

Efficient Robust Parameter Identification in Generalized Kalman Smoothing Models

Dynamic inference problems in autoregressive (AR/ARMA/ARIMA), exponential smoothing, and navigation are often formulated and solved using state-space models (SSM), which allow a range of statistical distributions to inform innovations and errors. In many applications the main goal is to identify not only the hidden state, but also additional unknown model parameters (e.g. AR coefficients or unknown dynamics). We show how to efficiently optimize over model parameters in SSM that use smooth process and measurement losses. Our approach is to project out state variables, obtaining a value function that only depends on the parameters of interest, and derive analytical formulas for first and second derivatives that can be used by many types of optimization methods. The approach can be used with smooth robust penalties such as Hybrid and the Student's t, in addition to classic least squares. We use the approach to estimate robust AR models and long-run unemployment rates with sudden changes.

math.OC↗

IRLS for Sparse Recovery Revisited: Examples of Failure and a Remedy

Compressed sensing is a central topic in signal processing with myriad applications, where the goal is to recover a signal from as few observations as possible. Iterative re-weighting is one of the fundamental tools to achieve this goal. This paper re-examines the iteratively reweighted least squares (IRLS) algorithm for sparse recovery proposed by Daubechies, Devore, Fornasier, and Güntürk in \emph{Iteratively reweighted least squares minimization for sparse recovery}, {\sf Communications on Pure and Applied Mathematics}, {\bf 63}(2010) 1--38. Under the null space property of order $K$, the authors show that their algorithm converges to the unique $k$-sparse solution for $k$ strictly bounded above by a value strictly less than $K$, and this $k$-sparse solution coincides with the unique $\ell_1$ solution. On the other hand, it is known that, for $k$ less than or equal to $K$, the $k$-sparse and $\ell_1$ solutions are unique and coincide. The authors emphasize that their proof method does not apply for $k$ sufficiently close to $K$, and remark that they were unsuccessful in finding an example where the algorithm fails for these values of $k$. In this note we construct a family of examples where the Daubechies-Devore-Fornasier-Güntürk IRLS algorithm fails for $k=K$, and provide a modification to their algorithm that provably converges to the unique $k$-sparse solution for $k$ less than or equal to $K$ while preserving the local linear rate. The paper includes numerical studies of this family as well as the modified IRLS algorithm, testing their robustness under perturbations and to parameter selection.

math.ST↗

Learning Nonlinear Brain Dynamics: van der Pol Meets LSTM

Many real-world data sets, especially in biology, are produced by complex nonlinear dynamical systems. In this paper, we focus on brain calcium imaging (CaI) of different organisms (zebrafish and rat), aiming to build a model of joint activation dynamics in large neuronal populations, including the whole brain of zebrafish. We propose a new approach for capturing dynamics of temporal SVD components that uses the coupled (multivariate) van der Pol (VDP) oscillator, a nonlinear ordinary differential equation (ODE) model describing neural activity, with a new parameter estimation technique that combines variable projection optimization and stochastic search. We show that the approach successfully handles nonlinearities and hidden state variables in the coupled VDP. The approach is accurate, achieving 0.82 to 0.94 correlation between the actual and model-generated components, and interpretable, as VDP's coupling matrix reveals anatomically meaningful positive (excitatory) and negative (inhibitory) interactions across different brain subsystems corresponding to spatial SVD components. Moreover, VDP is comparable to (or sometimes better than) recurrent neural networks (LSTM) for (short-term) prediction of future brain activity; VDP needs less parameters to train, which was a plus on our small training data. Finally, the overall best predictive method, greatly outperforming both VDP and LSTM in short- and long-term predictive settings on both datasets, was the new hybrid VDP-LSTM approach that used VDP to simulate large domain-specific dataset for LSTM pretraining; note that simple LSTM data-augmentation via noisy versions of training data was much less effective.

stat.ML↗

A Unified Framework for Sparse Relaxed Regularized Regression: SR3

Regularized regression problems are ubiquitous in statistical modeling, signal processing, and machine learning. Sparse regression in particular has been instrumental in scientific model discovery, including compressed sensing applications, variable selection, and high-dimensional analysis. We propose a broad framework for sparse relaxed regularized regression, called SR3. The key idea is to solve a relaxation of the regularized problem, which has three advantages over the state-of-the-art: (1) solutions of the relaxed problem are superior with respect to errors, false positives, and conditioning, (2) relaxation allows extremely fast algorithms for both convex and nonconvex formulations, and (3) the methods apply to composite regularizers such as total variation (TV) and its nonconvex variants. We demonstrate the advantages of SR3 (computational efficiency, higher accuracy, faster convergence rates, greater flexibility) across a range of regularized regression problems with synthetic and real data, including applications in compressed sensing, LASSO, matrix completion, TV regularization, and group sparsity. To promote reproducible research, we also provide a companion MATLAB package that implements these examples.

stat.ML↗

Generalized system identification with stable spline kernels

Regularized least-squares approaches have been successfully applied to linear system identification. Recent approaches use quadratic penalty terms on the unknown impulse response defined by stable spline kernels, which control model space complexity by leveraging regularity and bounded-input bounded-output stability. This paper extends linear system identification to a wide class of nonsmooth stable spline estimators, where regularization functionals and data misfits can be selected from a rich set of piecewise linear-quadratic (PLQ) penalties. This class includes the 1-norm, Huber, and Vapnik, in addition to the least-squares penalty. By representing penalties through their conjugates, the modeler can specify any piecewise linear-quadratic penalty for misfit and regularizer, as well as inequality constraints on the response. The interior-point solver we implement (IPsolve) is locally quadratically convergent, with $O(\min(m,n)^2(m+n))$ arithmetic operations per iteration, where $n$ the number of unknown impulse response coefficients and $m$ the number of observed output measurements. IPsolve is competitive with available alternatives for system identification. This is shown by a comparison with TFOCS, libSVM, and the FISTA algorithm. The code is open source (https://github.com/saravkin/IPsolve). The impact of the approach for system identification is illustrated with numerical experiments featuring robust formulations for contaminated data, relaxation systems, nonnegativity and unimodality constraints on the impulse response, and sparsity promoting regularization. Incorporating constraints yields particularly significant improvements.

stat.ML↗