arXiv subjects

Baoxin Li

Publications and source records attributed to Baoxin Li.

At least 19 recordsLinked to original sources

arXiv2026

RecipeNet: A Hierarchical Transformer for Recipe Data

Recipe data arises in domains such as materials synthesis, pharmaceutical formulation, and industrial manufacturing, where procedures are represented as ordered sequences of steps containing heterogeneous structured fields. Existing tabular learning methods typically flatten this structure into fixed-schema representations, limiting their ability to capture hierarchical field interactions and procedural dependencies. We propose RecipeNet, a hierarchical Transformer architecture that encodes field-level interactions within each step and sequential dependencies across steps through stacked Transformer encoders. Experiments on multiple recipe datasets and tasks demonstrate that RecipeNet consistently outperforms existing tabular models, highlighting the value of hierarchical and sequential modeling for recipe representation learning.

cs.LG↗

arXiv2026

AUCp: Pseudo-AUC for Inference Model Selection with Unlabeled Validation Data in Abnormality Detection

Abnormality detection is a crucial yet challenging task in medical image analysis. Distinguishing abnormalities from normal data by learning to reconstruct normal-only data alleviates the reliance on labeled datasets. However, many studies, even if unsupervised, rely on a labeled validation set to select the best model for inference from multiple training iterations. For many diseases labeled data are unavailable and substantially time consuming to obtain. To address this, AUCp - a novel metric that supports abnormality detection for unsupervised and self-supervised methods is proposed. Instead of evaluating the realism of reconstructed images to select the best of model for inference, it focuses on actual detection performance and without requiring an annotated test set. Assuming the pseudo ground truth of all unannotated samples in the test set as abnormal/positive and using traditional AUC calculation, AUCp scores are derived. Given a large and representative training set of normal samples, we show mathematical and empirical evidence that model selection using AUCp scores improves disease detection in terms of unsupervised and self-supervised methods over conventional metrics. Using two unsupervised methods for neurologic disease detection and self-supervised methods on diverse datasets, our results demonstrate that the AUCp score effectively identifies the optimal model for inference, significantly enhancing abnormality and disease detection. The corresponding implementations are available in https://github.com/mahfuzmohammad/AUCp.

cs.CV↗

arXiv2025

FID-Net: A Feature-Enhanced Deep Learning Network for Forest Infestation Detection

Forest pests threaten ecosystem stability, requiring efficient monitoring. To overcome the limitations of traditional methods in large-scale, fine-grained detection, this study focuses on accurately identifying infected trees and analyzing infestation patterns. We propose FID-Net, a deep learning model that detects pest-affected trees from UAV visible-light imagery and enables infestation analysis via three spatial metrics. Based on YOLOv8n, FID-Net introduces a lightweight Feature Enhancement Module (FEM) to extract disease-sensitive cues, an Adaptive Multi-scale Feature Fusion Module (AMFM) to align and fuse dual-branch features (RGB and FEM-enhanced), and an Efficient Channel Attention (ECA) mechanism to enhance discriminative information efficiently. From detection results, we construct a pest situation analysis framework using: (1) Kernel Density Estimation to locate infection hotspots; (2) neighborhood evaluation to assess healthy trees' infection risk; (3) DBSCAN clustering to identify high-density healthy clusters as priority protection zones. Experiments on UAV imagery from 32 forest plots in eastern Tianshan, China, show that FID-Net achieves 86.10% precision, 75.44% recall, 82.29% mAP@0.5, and 64.30% mAP@0.5:0.95, outperforming mainstream YOLO models. Analysis confirms infected trees exhibit clear clustering, supporting targeted forest protection. FID-Net enables accurate tree health discrimination and, combined with spatial metrics, provides reliable data for intelligent pest monitoring, early warning, and precise management.

cs.CV↗

arXiv2025

Label Smoothing++: Enhanced Label Regularization for Training Neural Networks

Training neural networks with one-hot target labels often results in overconfidence and overfitting. Label smoothing addresses this issue by perturbing the one-hot target labels by adding a uniform probability vector to create a regularized label. Although label smoothing improves the network's generalization ability, it assigns equal importance to all the non-target classes, which destroys the inter-class relationships. In this paper, we propose a novel label regularization training strategy called Label Smoothing++, which assigns non-zero probabilities to non-target classes and accounts for their inter-class relationships. Our approach uses a fixed label for the target class while enabling the network to learn the labels associated with non-target classes. Through extensive experiments on multiple datasets, we demonstrate how Label Smoothing++ mitigates overconfident predictions while promoting inter-class relationships and generalization capabilities.

cs.CV↗

arXiv2024

Context-Aware Token Selection and Packing for Enhanced Vision Transformer

In recent years, the long-range attention mechanism of vision transformers has driven significant performance breakthroughs across various computer vision tasks. However, the traditional self-attention mechanism, which processes both informative and non-informative tokens, suffers from inefficiency and inaccuracies. While sparse attention mechanisms have been introduced to mitigate these issues by pruning tokens involved in attention, they often lack context-awareness and intelligence. These mechanisms frequently apply a uniform token selection strategy across different inputs for batch training or optimize efficiency only for the inference stage. To overcome these challenges, we propose a novel algorithm: Select and Pack Attention (SPA). SPA dynamically selects informative tokens using a low-cost gating layer supervised by selection labels and packs these tokens into new batches, enabling a variable number of tokens to be used in parallelized GPU batch training and inference. Extensive experiments across diverse datasets and computer vision tasks demonstrate that SPA delivers superior performance and efficiency, including a 0.6 mAP improvement in object detection and a 16.4% reduction in computational costs.

cs.CV↗

arXiv2024

Accurate Patient Alignment without Unnecessary Imaging Dose via Synthesizing Patient-specific 3D CT Images from 2D kV Images

In radiotherapy, 2D orthogonally projected kV images are used for patient alignment when 3D-on-board imaging(OBI) unavailable. But tumor visibility is constrained due to the projection of patient's anatomy onto a 2D plane, potentially leading to substantial setup errors. In treatment room with 3D-OBI such as cone beam CT(CBCT), the field of view(FOV) of CBCT is limited with unnecessarily high imaging dose, thus unfavorable for pediatric patients. A solution to this dilemma is to reconstruct 3D CT from kV images obtained at the treatment position. Here, we propose a dual-models framework built with hierarchical ViT blocks. Unlike a proof-of-concept approach, our framework considers kV images as the solo input and can synthesize accurate, full-size 3D CT in real time(within milliseconds). We demonstrate the feasibility of the proposed approach on 10 patients with head and neck (H&N) cancer using image quality(MAE: <45HU), dosimetrical accuracy(Gamma passing rate (2%/2mm/10%)>97%) and patient position uncertainty(shift error: <0.4mm). The proposed framework can generate accurate 3D CT faithfully mirroring real-time patient position, thus significantly improving patient setup accuracy, keeping imaging dose minimum, and maintaining treatment veracity.

eess.SP↗

arXiv2024

Domain Adaptation Using Pseudo Labels

In the absence of labeled target data, unsupervised domain adaptation approaches seek to align the marginal distributions of the source and target domains in order to train a classifier for the target. Unsupervised domain alignment procedures are category-agnostic and end up misaligning the categories. We address this problem by deploying a pretrained network to determine accurate labels for the target domain using a multi-stage pseudo-label refinement procedure. The filters are based on the confidence, distance (conformity), and consistency of the pseudo labels. Our results on multiple datasets demonstrate the effectiveness of our simple procedure in comparison with complex state-of-the-art techniques.

cs.CV↗

arXiv2023

Transformer-based Selective Super-Resolution for Efficient Image Refinement

Conventional super-resolution methods suffer from two drawbacks: substantial computational cost in upscaling an entire large image, and the introduction of extraneous or potentially detrimental information for downstream computer vision tasks during the refinement of the background. To solve these issues, we propose a novel transformer-based algorithm, Selective Super-Resolution (SSR), which partitions images into non-overlapping tiles, selects tiles of interest at various scales with a pyramid architecture, and exclusively reconstructs these selected tiles with deep features. Experimental results on three datasets demonstrate the efficiency and robust performance of our approach for super-resolution. Compared to the state-of-the-art methods, the FID score is reduced from 26.78 to 10.41 with 40% reduction in computation cost for the BDD100K dataset. The source code is available at https://github.com/destiny301/SSR.

cs.CV↗

arXiv2023

Patch-based Selection and Refinement for Early Object Detection

Early object detection (OD) is a crucial task for the safety of many dynamic systems. Current OD algorithms have limited success for small objects at a long distance. To improve the accuracy and efficiency of such a task, we propose a novel set of algorithms that divide the image into patches, select patches with objects at various scales, elaborate the details of a small object, and detect it as early as possible. Our approach is built upon a transformer-based network and integrates the diffusion model to improve the detection accuracy. As demonstrated on BDD100K, our algorithms enhance the mAP for small objects from 1.03 to 8.93, and reduce the data volume in computation by more than 77\%. The source code is available at \href{https://github.com/destiny301/dpr}{https://github.com/destiny301/dpr}

cs.CV↗

arXiv2023

Ordinal Classification with Distance Regularization for Robust Brain Age Prediction

Age is one of the major known risk factors for Alzheimer's Disease (AD). Detecting AD early is crucial for effective treatment and preventing irreversible brain damage. Brain age, a measure derived from brain imaging reflecting structural changes due to aging, may have the potential to identify AD onset, assess disease risk, and plan targeted interventions. Deep learning-based regression techniques to predict brain age from magnetic resonance imaging (MRI) scans have shown great accuracy recently. However, these methods are subject to an inherent regression to the mean effect, which causes a systematic bias resulting in an overestimation of brain age in young subjects and underestimation in old subjects. This weakens the reliability of predicted brain age as a valid biomarker for downstream clinical applications. Here, we reformulate the brain age prediction task from regression to classification to address the issue of systematic bias. Recognizing the importance of preserving ordinal information from ages to understand aging trajectory and monitor aging longitudinally, we propose a novel ORdinal Distance Encoded Regularization (ORDER) loss that incorporates the order of age labels, enhancing the model's ability to capture age-related patterns. Extensive experiments and ablation studies demonstrate that this framework reduces systematic bias, outperforms state-of-art methods by statistically significant margins, and can better capture subtle differences between clinical groups in an independent AD dataset. Our implementation is publicly available at https://github.com/jaygshah/Robust-Brain-Age-Prediction.

eess.IV↗

arXiv2023

Instance Adaptive Prototypical Contrastive Embedding for Generalized Zero Shot Learning

Generalized zero-shot learning(GZSL) aims to classify samples from seen and unseen labels, assuming unseen labels are not accessible during training. Recent advancements in GZSL have been expedited by incorporating contrastive-learning-based (instance-based) embedding in generative networks and leveraging the semantic relationship between data points. However, existing embedding architectures suffer from two limitations: (1) limited discriminability of synthetic features' embedding without considering fine-grained cluster structures; (2) inflexible optimization due to restricted scaling mechanisms on existing contrastive embedding networks, leading to overlapped representations in the embedding space. To enhance the quality of representations in the embedding space, as mentioned in (1), we propose a margin-based prototypical contrastive learning embedding network that reaps the benefits of prototype-data (cluster quality enhancement) and implicit data-data (fine-grained representations) interaction while providing substantial cluster supervision to the embedding network and the generator. To tackle (2), we propose an instance adaptive contrastive loss that leads to generalized representations for unseen labels with increased inter-class margin. Through comprehensive experimental evaluation, we show that our method can outperform the current state-of-the-art on three benchmark datasets. Our approach also consistently achieves the best unseen performance in the GZSL setting.

cs.CV↗

arXiv2023

Deep-Learning-based Fast and Accurate 3D CT Deformable Image Registration in Lung Cancer

Purpose: In some proton therapy facilities, patient alignment relies on two 2D orthogonal kV images, taken at fixed, oblique angles, as no 3D on-the-bed imaging is available. The visibility of the tumor in kV images is limited since the patient's 3D anatomy is projected onto a 2D plane, especially when the tumor is behind high-density structures such as bones. This can lead to large patient setup errors. A solution is to reconstruct the 3D CT image from the kV images obtained at the treatment isocenter in the treatment position. Methods: An asymmetric autoencoder-like network built with vision-transformer blocks was developed. The data was collected from 1 head and neck patient: 2 orthogonal kV images (1024x1024 voxels), 1 3D CT with padding (512x512x512) acquired from the in-room CT-on-rails before kVs were taken and 2 digitally-reconstructed-radiograph (DRR) images (512x512) based on the CT. We resampled kV images every 8 voxels and DRR and CT every 4 voxels, thus formed a dataset consisting of 262,144 samples, in which the images have a dimension of 128 for each direction. In training, both kV and DRR images were utilized, and the encoder was encouraged to learn the jointed feature map from both kV and DRR images. In testing, only independent kV images were used. The full-size synthetic CT (sCT) was achieved by concatenating the sCTs generated by the model according to their spatial information. The image quality of the synthetic CT (sCT) was evaluated using mean absolute error (MAE) and per-voxel-absolute-CT-number-difference volume histogram (CDVH). Results: The model achieved a speed of 2.1s and a MAE of <40HU. The CDVH showed that <5% of the voxels had a per-voxel-absolute-CT-number-difference larger than 185 HU. Conclusion: A patient-specific vision-transformer-based network was developed and shown to be accurate and efficient to reconstruct 3D CT images from kV images.

cs.CV↗

arXiv2023

Brainomaly: Unsupervised Neurologic Disease Detection Utilizing Unannotated T1-weighted Brain MR Images

Harnessing the power of deep neural networks in the medical imaging domain is challenging due to the difficulties in acquiring large annotated datasets, especially for rare diseases, which involve high costs, time, and effort for annotation. Unsupervised disease detection methods, such as anomaly detection, can significantly reduce human effort in these scenarios. While anomaly detection typically focuses on learning from images of healthy subjects only, real-world situations often present unannotated datasets with a mixture of healthy and diseased subjects. Recent studies have demonstrated that utilizing such unannotated images can improve unsupervised disease and anomaly detection. However, these methods do not utilize knowledge specific to registered neuroimages, resulting in a subpar performance in neurologic disease detection. To address this limitation, we propose Brainomaly, a GAN-based image-to-image translation method specifically designed for neurologic disease detection. Brainomaly not only offers tailored image-to-image translation suitable for neuroimages but also leverages unannotated mixed images to achieve superior neurologic disease detection. Additionally, we address the issue of model selection for inference without annotated samples by proposing a pseudo-AUC metric, further enhancing Brainomaly's detection performance. Extensive experiments and ablation studies demonstrate that Brainomaly outperforms existing state-of-the-art unsupervised disease and anomaly detection methods by significant margins in Alzheimer's disease detection using a publicly available dataset and headache detection using an institutional dataset. The code is available from https://github.com/mahfuzmohammad/Brainomaly.

eess.IV↗

arXiv2022

PatchRot: A Self-Supervised Technique for Training Vision Transformers

Vision transformers require a huge amount of labeled data to outperform convolutional neural networks. However, labeling a huge dataset is a very expensive process. Self-supervised learning techniques alleviate this problem by learning features similar to supervised learning in an unsupervised way. In this paper, we propose a self-supervised technique PatchRot that is crafted for vision transformers. PatchRot rotates images and image patches and trains the network to predict the rotation angles. The network learns to extract both global and local features from an image. Our extensive experiments on different datasets showcase PatchRot training learns rich features which outperform supervised learning and compared baseline.

cs.CV↗

arXiv2022

HealthyGAN: Learning from Unannotated Medical Images to Detect Anomalies Associated with Human Disease

Automated anomaly detection from medical images, such as MRIs and X-rays, can significantly reduce human effort in disease diagnosis. Owing to the complexity of modeling anomalies and the high cost of manual annotation by domain experts (e.g., radiologists), a typical technique in the current medical imaging literature has focused on deriving diagnostic models from healthy subjects only, assuming the model will detect the images from patients as outliers. However, in many real-world scenarios, unannotated datasets with a mix of both healthy and diseased individuals are abundant. Therefore, this paper poses the research question of how to improve unsupervised anomaly detection by utilizing (1) an unannotated set of mixed images, in addition to (2) the set of healthy images as being used in the literature. To answer the question, we propose HealthyGAN, a novel one-directional image-to-image translation method, which learns to translate the images from the mixed dataset to only healthy images. Being one-directional, HealthyGAN relaxes the requirement of cycle consistency of existing unpaired image-to-image translation methods, which is unattainable with mixed unannotated data. Once the translation is learned, we generate a difference map for any given image by subtracting its translated output. Regions of significant responses in the difference map correspond to potential anomalies (if any). Our HealthyGAN outperforms the conventional state-of-the-art methods by significant margins on two publicly available datasets: COVID-19 and NIH ChestX-ray14, and one institutional dataset collected from Mayo Clinic. The implementation is publicly available at https://github.com/mahfuzmohammad/HealthyGAN.

eess.IV↗

arXiv2022

Bridging the Gap: Commonality and Differences between Online and Offline COVID-19 Data

With the onset of the COVID-19 pandemic, news outlets and social media have become central tools for disseminating and consuming information. Because of their ease of access, users seek COVID-19-related information from online social media (i.e., online news) and news outlets (i.e., offline news). Online and offline news are often connected, sharing common topics while each has unique, different topics. A gap between these two news sources can lead to misinformation propagation. For instance, according to the Guardian, most COVID-19 misinformation comes from users on social media. Without fact-checking social media news, misinformation can lead to health threats. In this paper, we focus on the novel problem of bridging the gap between online and offline data by monitoring their common and distinct topics generated over time. We employ Twitter (online) and local news (offline) data for a time span of two years. Using online matrix factorization, we analyze and study online and offline COVID-19-related data differences and commonalities. We design experiments to show how online and offline data are linked together and what trends they follow.

cs.SI↗

arXiv2022

CoVaxNet: An Online-Offline Data Repository for COVID-19 Vaccine Hesitancy Research

Despite the astonishing success of COVID-19 vaccines against the virus, a substantial proportion of the population is still hesitant to be vaccinated, undermining governmental efforts to control the virus. To address this problem, we need to understand the different factors giving rise to such a behavior, including social media discourses, news media propaganda, government responses, demographic and socioeconomic statuses, and COVID-19 statistics, etc. However, existing datasets fail to cover all these aspects, making it difficult to form a complete picture in inferencing about the problem of vaccine hesitancy. In this paper, we construct a multi-source, multi-modal, and multi-feature online-offline data repository CoVaxNet. We provide descriptive analyses and insights to illustrate critical patterns in CoVaxNet. Moreover, we propose a novel approach for connecting online and offline data so as to facilitate the inference tasks that exploit complementary information sources.

cs.CY↗

arXiv2022

Optical Flow for Video Super-Resolution: A Survey

Video super-resolution is currently one of the most active research topics in computer vision as it plays an important role in many visual applications. Generally, video super-resolution contains a significant component, i.e., motion compensation, which is used to estimate the displacement between successive video frames for temporal alignment. Optical flow, which can supply dense and sub-pixel motion between consecutive frames, is among the most common ways for this task. To obtain a good understanding of the effect that optical flow acts in video super-resolution, in this work, we conduct a comprehensive review on this subject for the first time. This investigation covers the following major topics: the function of super-resolution (i.e., why we require super-resolution); the concept of video super-resolution (i.e., what is video super-resolution); the description of evaluation metrics (i.e., how (video) superresolution performs); the introduction of optical flow based video super-resolution; the investigation of using optical flow to capture temporal dependency for video super-resolution. Prominently, we give an in-depth study of the deep learning based video super-resolution method, where some representative algorithms are analyzed and compared. Additionally, we highlight some promising research directions and open issues that should be further addressed.

cs.CV↗