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Binbin Shi

Publications and source records attributed to Binbin Shi.

14 recordsLinked to original sources

Why Does Grounding Hurt Medical VQA? Benchmarking, Diagnosis, and Fine-Tuning of Vision-Language Models

Vision-language models (VLMs) are increasingly applied to medical visual question answering (Med-VQA), yet whether they can \emph{localize} the evidence behind their answers---a prerequisite for clinical auditability---is poorly characterized. We separately evaluate VQA reasoning and visual grounding for four recent frontier VLMs (GPT-5.1, GPT-5.5, Gemini-2.5-Pro, Gemini-3-Flash), two domain-specific medical VLMs (Lingshu, MedGemma), and a dedicated open-vocabulary detector (Grounding DINO) on VQA-RAD and SLAKE. Two findings challenge the intuition that ``add grounding to improve VQA.'' First, \textbf{no model localizes medical targets well}: every off-the-shelf system---frontier, medical-specialized, or dedicated detector---scores mean IoU 0.05--0.24 on our SLAKE grounding split, at or barely above a trivial center-box baseline (0.10), with Acc@0.5 below 20\%. Second, and counter to the common ``localize-then-answer'' paradigm, \textbf{cropping to a bounding box degrades VQA even when the box is a perfect oracle}: on the matched subset where oracle ground-truth boxes are applied, GT-grounding \emph{lowers} closed-ended accuracy for every model (by 0.9--18.0 points versus using the full image)---consistent with the crop discarding global context the model relies on. Because the oracle box removes localization error by construction, the problem is not that perception is a recoverable bottleneck, but that grounding-by-cropping is itself the wrong interface. Finally, we show constructively that the two channels need not conflict: supervised fine-tuning of Qwen-2.5-VL-7B on answers \emph{alone} silently destroys box-evidence emission (0/418 parseable boxes), whereas mixing in a small amount of grounding supervision restores localization to 0.36 IoU---above every zero-shot model---while preserving answer accuracy.

cs.AI

Iterative Multimodal Retrieval-Augmented Generation for Medical Question Answering

Medical retrieval-augmented generation (RAG) systems typically operate on text chunks extracted from biomedical literature, discarding the rich visual content (tables, figures, structured layouts) of original document pages. We propose MED-VRAG, an iterative multimodal RAG framework that retrieves and reasons over PMC document page images instead of OCR'd text. The system pairs ColQwen2.5 patch-level page embeddings with a sharded MapReduce LLM filter, scaling to ~350K pages while keeping Stage-1 retrieval under 30 ms via an offline coarse-to-fine index (C=8 centroids per page, ANN over centroids, exact two-way scoring on the top-R shortlist). A vision-language model (VLM) then iteratively refines its query and accumulates evidence in a memory bank across up to 3 reasoning rounds, with a single iteration costing ~15.9 s and the full three-round pipeline ~47.8 s on 4xA100. Across four medical QA benchmarks (MedQA, MedMCQA, PubMedQA, MMLU-Med), MEDVRAG reaches 78.6% average accuracy. Under controlled comparison with the same Qwen2.5-VL-32B backbone, retrieval contributes a +5.8 point gain over the no-retrieval baseline; we also note a +1.8 point edge over MedRAG + GPT-4 (76.8%), with the caveat that this is a cross-paper rather than head-to-head comparison. Ablations isolate +1.0 from page-image vs text-chunk retrieval, +1.5 from iteration, and +1.0 from the memory bank.

cs.AI

Structured Personality Control and Adaptation for LLM Agents

Large Language Models (LLMs) are increasingly shaping human-computer interaction (HCI), from personalized assistants to social simulations. Beyond language competence, researchers are exploring whether LLMs can exhibit human-like characteristics that influence engagement, decision-making, and perceived realism. Personality, in particular, is critical, yet existing approaches often struggle to achieve both nuanced and adaptable expression. We present a framework that models LLM personality via Jungian psychological types, integrating three mechanisms: a dominant-auxiliary coordination mechanism for coherent core expression, a reinforcement-compensation mechanism for temporary adaptation to context, and a reflection mechanism that drives long-term personality evolution. This design allows the agent to maintain nuanced traits while dynamically adjusting to interaction demands and gradually updating its underlying structure. Personality alignment is evaluated using Myers-Briggs Type Indicator questionnaires and tested under diverse challenge scenarios as a preliminary structured assessment. Findings suggest that evolving, personality-aware LLMs can support coherent, context-sensitive interactions, enabling naturalistic agent design in HCI.

cs.AI

Suppression of blow-up in 3-D Keller-Segel system with fractional diffusion via Couette flow in whole space

In this paper, we consider a Keller-Segel model with a fractional diffusion term in $\mathbb{R}^3$ in the background of a Couette flow. We show that when the background Couette flow is large enough, the dissipation enhancement induced could prevent the blow-up of solutions and thus prove the global existence and also obtain time decay rates of the solution in $L^p$ norm. The main tool of the proof is a corresponding Green's function and the key estimate is its $L^1$ estimate without singularities at $t=0$. To fulfill such an estimate, we meet great troubles caused by the fractional heat kernel together with the Couette flow in the model considered here and overcome the troubles by introducing a space-frequency mixed decomposition.

math.AP

Enhanced dissipation and blow-up suppression for an aggregation equation with fractional diffusion and shear flow

In this paper, we consider an aggregation equation with fractional diffusion and large shear flow, which arise from modelling chemotaxis in bacteria. Without the advection, the solution of aggregation equation may blow up in finite time. First, we study the enhanced dissipation of shear flow by resolvent estimate method, where the fractional Laplacian $(-\Delta)^{\alpha/2}$ is considered and $\alpha\in (0,2)$. Next, we show that the enhanced dissipation of shear flow can suppress blow-up of solution to aggregation equation with fractional diffusion and establish global classical solution in the case of $\alpha\geq 3/2$. Here we develop some new technical to overcome the difficult of low regularity for fractional Laplacian.

math.AP

Nonlinear stability and transition threshold for the planar helical flow

In this paper, we study the nonlinear stability for the 3-D planar helical flow $(\delta^2\sin(m_0 y),\delta^2\cos(m_0 y),0)$ on torus $\mathbb{T}^3=\{(x_1,x_2,y)\big|x_1,x_2\in \mathbb{T}_{2\pi}, y\in \mathbb{T}_{2\pi \delta}, \delta\geq1\}$ for high Reynolds number $Re$. We prove that if the initial velocity $U_0$ satisfies $$ \left\|U_0-(\delta^2\sin(m_0 y),\delta^2\cos(m_0 y),0)\right\|_{X_0}\leq c_0 Re^{-7/4} $$ for some $c_0>0$ independent of $Re$, then the solution of 3-D incompressible Navier-Stokes equation is global in time and does not transit away from the planar helical flow. Here $\delta>1, m_0=\delta^{-1}$ and the norm $\|\cdot\|_{X_0}$ is defined in (1.8). This is a nonlinear stability result for 3-D non-shear flow and the transition threshold is less than $7/4$.

math.AP

Suppression of blow-up in 3-D Keller-Segel model via Couette flow in whole space

In this paper, we study the 3-D parabolic-parabolic and parabolic-elliptic Keller-Segel models with Couette flow in $\mathbb{R}^3$. We prove that the blow-up phenomenon of solution can be suppressed by enhanced dissipation of large Couette flows. Here we develop Green's function method to describe the enhanced dissipation via a more precise space-time structure and obtain the global existence together with pointwise estimates of the solutions. The result of this paper shows that the enhanced dissipation exists for all frequencies in the case of whole space and it is reason that we obtain global existence for 3-D Keller-Segel models here. It is totally different from the case with the periodic spatial variable $x$ in [2,10]. This paper provides a new methodology to capture dissipation enhancement and also a surprising result which shows a totally new mechanism.

math.AP

Enhanced dissipation and blow-up suppression for the three dimensional Keller-Segel equation with a non-shear incompressible flow

In this paper, we consider the Cauchy problem for the three dimensional parabolic-elliptic Keller-Segel equation with a large non-shear incompressible flow. Without advection, there exist solution with arbitrarily mass which blow up in finite time. Firstly, we introduce a three dimensional non-shear incompressible flow and study the enhanced dissipation of such flows by resolvent estimate method. Next, we show that the enhanced dissipation of such flow can suppress blow-up of solution to three dimensional parabolic-elliptic Keller-Segel equation and establish global classical solution with large initial data.

math.AP

Global well-posedness for a generalized Keller-Segel system with degenerate dissipation and mixing

We study the mixing effect for a generalized Keller-Segel system with degenerate dissipation and advection by a weakly mixing. Here the attractive operator has weak singularity, namely, the negative derivative appears in the nonlinear term by singular integral. Without advection, the solution of equation blows up in finite time. We show that the global well-posedness of solution with large advection. Since dissipation term degenerate into the damping, the enhanced dissipation effect of mixing no longer occurs, we prove that the mixing effect can weak the influence of nonlinear term. In this case, the mixing effect is similar with inviscid damping of shear flow. Combining to the mixing effect and damping effect of degenerate dissipation, the global $L^\infty$ estimate of solution is established.

math.AP

Dissipation enhancement of planar helical flows and applications to three-dimensional Kuramoto-Sivashinsky and Keller-Segel equations

We introduce the planar helical flows on three dimensional torus and study the dissipation enhancement of such flows. We then use such flows as transport flows to solve the three dimensional advective Kuramoto-Sivashinsky and Keller-Segel equations. The global well-posedness of the Kuramoto-Sivashinsky equation is achieved when the linearized operator does not have growing mode in the direction orthogonal to the flow. The global classical solution of the three dimensional Keller-Segel is ensured for any size of the torus with arbitrarily large initial data.

math.AP

Suppression of blow up by mixing in generalized Keller-Segel system with fractional dissipation and strong singular kernel

In this paper, we consider the Cauchy problem for a generalized parabolic-elliptic Keller-Segel equation with a fractional dissipation and advection by a weakly mixing (see Definition \ref{def:2.4}). Here the attractive kernel has strong singularity, namely, the derivative appears in the nonlinear term by singular integral. Without advection, the solution of equation blows up in finite time. Under a suitable mixing condition on the advection, we show the global existence of classical solution with large initial data in the case of the derivative of dissipative term is higher than that of nonlinear term. Since the attractive kernel is strong singularity, the weakly mixing has destabilizing effect in addition to the enhanced dissipation effect, which makes the problem more complicated and difficult. In this paper, we establish the $L^\infty$-criterion and obtain the global $L^\infty$ estimate of the solution through some new ideas and techniques. Combined with \cite{Shi.2019}, we discuss all cases of generalized Keller-Segel system with mixing effect, which was proposed by Kiselev, Xu (see \cite{Kiselev.2016}) and Hopf, Rodrigo (see \cite{Hopf.2018}). Based on more precise estimate of solution and the resolvent estimate of semigroup operator, we introduce a new method to study the enhanced dissipation effect of mixing in generalized parabolic-elliptic Keller-Segel equation with a fractional dissipation. And the RAGE theorem is no longer needed in our analysis.

math.AP

Applying Machine Learning To Maize Traits Prediction

Heterosis is the improved or increased function of any biological quality in a hybrid offspring. We have studied yet the largest maize SNP dataset for traits prediction. We develop linear and non-linear models which consider relationships between different hybrids as well as other effect. Specially designed model proved to be efficient and robust in prediction maize's traits.

stat.ML

Deep Mask For X-ray Based Heart Disease Classification

We build a deep learning model to detect and classify heart disease using $X-ray$. We collect data from several hospitals and public datasets. After preprocess we get 3026 images including disease type VSD, ASD, TOF and normal control. The main problem we have to solve is to enable the network to accurately learn the characteristics of the heart, to ensure the reliability of the network while increasing accuracy. By learning the doctor's diagnostic experience, labeling the image and using tools to extract masks of heart region, we train a U-net to generate a mask to give more attention. It forces the model to focus on the characteristics of the heart region and obtain more reliable results.

cs.CV

Suppression of blow up by mixing in generalized Keller-Segel system with fractional dissipation

In this paper, we consider the Cauchy problem for a generalized parabolic-elliptic Keller-Segel equation with fractional dissipation and the additional mixing effect of advection by an incompressible flow. Under suitable mixing condition on the advection, we study well-posedness of solution with large initial data. We establish the global $L^\infty$ estimate of the solution through nonlinear maximum principle, and obtain the global classical solution.

math.AP