arXiv subjects

Brett A. McGuire

Publications and source records attributed to Brett A. McGuire.

At least 37 records · Page 2Linked to original sources

arXiv2024

High Spectral Resolution Observations of Propynal (HCCCHO) towards TMC-1 from the GOTHAM Large Program on the Green Bank Telescope

We used new high spectral resolution observations of propynal (HCCCHO) towards TMC-1 and in the laboratory to update the spectral line catalog available for transitions of HCCCHO - specifically at frequencies lower than 30 GHz which were previously discrepant in a publicly available catalog. The observed astronomical frequencies provided high enough spectral resolution that, when combined with high-resolution (~2 kHz) measurements taken in the laboratory, a new, consistent fit to both the laboratory and astronomical data was achieved. Now with a nearly exact (<1 kHz) frequency match to the J=2-1 and 3-2 transitions in the astronomical data, using a Markov chain Monte Carlo (MCMC) analysis, a best fit to the total HCCCHO column density of 7.28+4.08/-1.94 x 10^12 cm^-2 was found with a surprisingly low excitation temperature of just over 3 K. This column density is around a factor of 5 times larger than reported in previous studies. Finally, this work highlights that care is needed when using publicly available spectral catalogs to characterize astronomical spectra. The availability of these catalogs is essential to the success of modern astronomical facilities and will only become more important as the next generation of facilities come online.

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arXiv2024

Interstellar Glycolaldehyde, Methyl Formate, and Acetic Acid. II. Chemical Modeling of the Bimodal Abundance Pattern in NGC 6334I

Gas-phase abundance ratios between \ce{C2H4O2} isomers methyl formate (MF), glycolaldehyde (GA), and acetic acid (AA) are typically on the order of 100:10:1 in star-forming regions. However, an unexplained divergence from this neat relationship was recently observed towards a collection of sources in the massive protocluster NGC 6334I; some sources exhibited extreme MF:GA ratios, producing a bimodal behavior between different sources, while the MF:AA ratio remained stable. Here, we use a three-phase gas-grain hot-core chemical model to study the effects of a large parameter space on the simulated \ce{C2H4O2} abundances. A combination of high gas densities and long timescales during ice-mantle desorption ($\sim$125--160~K) appears to be the physical cause of the high MF:GA ratios. The main chemical mechanism for GA destruction occurring under these conditions is the rapid adsorption and reaction of atomic H with GA on the ice surfaces before it has time to desorb. The different binding energies of MF and GA on water ice are crucial to the selectivity of the surface destruction mechanism; individual MF molecules rapidly escape the surface when exposed by water loss, while GA lingers and is destroyed by H. Moderately elevated cosmic-ray ionization rates can increase absolute levels of COM production in the ices and increase the MF:GA ratio, but extreme values are destructive for gas-phase COMs. We speculate that the high densities required for extreme MF:GA ratios could be evidence of COM emission dominated by COMs desorbing within a circumstellar disk.

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arXiv2024

JWST ice band profiles reveal mixed ice compositions in the HH 48 NE disk

Planet formation is strongly influenced by the composition and distribution of volatiles within protoplanetary disks. With JWST, it is now possible to obtain direct observational constraints on disk ices, as recently demonstrated by the detection of ice absorption features towards the edge-on HH 48 NE disk as part of the Ice Age Early Release Science program. Here, we introduce a new radiative transfer modeling framework designed to retrieve the composition and mixing status of disk ices using their band profiles, and apply it to interpret the H2O, CO2, and CO ice bands observed towards the HH 48 NE disk. We show that the ices are largely present as mixtures, with strong evidence for CO trapping in both H2O and CO2 ice. The HH 48 NE disk ice composition (pure vs. polar vs. apolar fractions) is markedly different from earlier protostellar stages, implying thermal and/or chemical reprocessing during the formation or evolution of the disk. We infer low ice-phase C/O ratios around 0.1 throughout the disk, and also demonstrate that the mixing and entrapment of disk ices can dramatically affect the radial dependence of the C/O ratio. It is therefore imperative that realistic disk ice compositions are considered when comparing planetary compositions with potential formation scenarios, which will fortunately be possible for an increasing number of disks with JWST.

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arXiv2024

Automated Mixture Analysis via Structural Evaluation

The determination of chemical mixture components is vital to a multitude of scientific fields. Oftentimes spectroscopic methods are employed to decipher the composition of these mixtures. However, the sheer density of spectral features present in spectroscopic databases can make unambiguous assignment to individual species challenging. Yet, components of a mixture are commonly chemically related due to environmental processes or shared precursor molecules. Therefore, analysis of the chemical relevance of a molecule is important when determining which species are present in a mixture. In this paper, we combine machine-learning molecular embedding methods with a graph-based ranking system to determine the likelihood of a molecule being present in a mixture based on the other known species and/or chemical priors. By incorporating this metric in a rotational spectroscopy mixture analysis algorithm, we demonstrate that the mixture components can be identified with extremely high accuracy (>97%) in an efficient manner.

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arXiv2024

Accretion and Outflow in Orion-KL Source I

We present ALMA observations of SiO, SiS, H$_2$O , NaCl, and SO line emission at ~30 to 50 mas resolution. These images map the molecular outflow and disk of Orion Source I (SrcI) on ~12 to 20 AU scales. Our observations show that the flow of material around SrcI creates a turbulent boundary layer in the outflow from SrcI which may dissipate angular momentum in the rotating molecular outflow into the surrounding medium. Additionally, the data suggests that the proper motion of SrcI may have a significant effect on the structure and evolution of SrcI and its molecular outflow. As the motion of SrcI funnels material between the disk and the outflow, some material may be entrained into the outflow and accrete onto the disk, creating shocks which excite the NaCl close to the disk surface.

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arXiv2024

On the origin of infrared bands attributed to tryptophan in Spitzer observations of IC 348

Infrared emission features toward interstellar gas of the IC 348 star cluster in Perseus have been recently proposed to originate from the amino acid tryptophan. The assignment was based on laboratory infrared spectra of tryptophan pressed into pellets, a method which is known to cause large frequency shifts compared to the gas phase. We assess the validity of the assignment based on the original Spitzer data as well as new data from JWST. In addition, we report new spectra of tryptophan condensed in para-hydrogen matrices to compare with the observed spectra. The JWST MIRI data do not show evidence for tryptophan, despite deeper integration toward IC 348. In addition, we show that several of the lines attributed to tryptophan are likely due to instrumental artifacts. This, combined with the new laboratory data, allows us to conclude that there is no compelling evidence for the tryptophan assignment.

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arXiv2024

A Possible Additional Formation Pathway for the Interstellar Diatomic SiS

The formation of silicon monosulfide (SiS) in space appears to be a difficult process, but the present work is showing that a previously excluded pathway may contribute to its astronomical abundance. Reaction of the radicals SH + SiH produces SiS with a submerged transition state and generates a stabilizing H$_2$ molecule as a product to dissipate the kinetic energy. Such is a textbook chemical reaction for favorable gas-phase chemistry. While previously proposed mechanisms reacting atomic sulfur and silicon with SiH, SH, and H$_2$S will still be major contributors to the production of SiS, an abundance of SiS in certain regions could be a marker for the presence of SiH where it has previously been unobserved. These quantum chemically-computed reaction profiles imply that the silicon-chalcogen chemistry of molecular clouds, shocked regions, or protoplanetary disks may be richer than previously thought. Quantum chemical spectral data for the intermediate cis- and trans-HSiSH are also provided in order to aid in their potential spectroscopic characterization.

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arXiv2024

Rotational Spectrum and First Interstellar Detection of 2-Methoxyethanol Using ALMA Observations of NGC 6334I

We use both chirped-pulse Fourier transform and frequency modulated absorption spectroscopy to study the rotational spectrum of 2-methoxyethanol in several frequency regions ranging from 8.7-500 GHz. The resulting rotational parameters permitted a search for this molecule in Atacama Large Millimeter/submillimeter Array (ALMA) observations toward the massive protocluster NGC 6334I as well as source B of the low-mass protostellar system IRAS 16293-2422. 25 rotational transitions are observed in the ALMA Band 4 data toward NGC 6334I, resulting in the first interstellar detection of 2-methoxyethanol. A column density of $1.3_{-0.9}^{+1.4} \times 10^{17}$ cm$^{-2}$ is derived at an excitation temperature of $143_{-39}^{+31}$ K. However, molecular signal is not observed in the Band 7 data toward IRAS 16293-2422B and an upper limit column density of $2.5 \times 10^{15}$ cm$^{-2}$ is determined. Various possible formation pathways--including radical recombination and insertion reactions--are discussed. We also investigate physical differences between the two interstellar sources that could result in the observed abundance variations.

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arXiv2024

An Automated Chemical Exploration of NGC 6334I at 340 au Resolution

Much of the information gleaned from observations of star-forming regions comes from the analysis of their molecular emission spectra, particularly in the radio regime. The time-consuming nature of fitting synthetic spectra to observations interactively for such line-rich sources, however, often results in such analysis being limited to data extracted from a single-dish observation or a handful of pixels from an interferometric observation. Yet, star-forming regions display a wide variety of physical conditions that are difficult, if not impossible, to accurately characterize with such a limited number of spectra. We have developed an automated fitting routine that visits every pixel in the field of view of an ALMA data cube and determines the best-fit physical parameters, including excitation temperature and column densities, for a given list of molecules. In this proof-of-concept work, we provide an overview of the fitting routine and apply it to 0".26, 1.1 km s$^{-1}$ resolution ALMA observations of two sites of massive star-formation in NGC 6334I. Parameters were found for 21 distinct molecules by generating synthetic spectra across 7.48 GHz of spectral bandwidth between 280 and 351 GHz. Spatial images of the derived parameters for each of the > 8000 pixels are presented with special attention paid to the C$_2$H$_4$O$_2$ isomers and their relative variations. We highlight the greater scientific utility of the column density and velocity images of individual molecules compared to traditional moment maps of single transitions.

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arXiv2023

PDRs4All III: JWST's NIR spectroscopic view of the Orion Bar

(Abridged) We investigate the impact of radiative feedback from massive stars on their natal cloud and focus on the transition from the HII region to the atomic PDR (crossing the ionisation front (IF)), and the subsequent transition to the molecular PDR (crossing the dissociation front (DF)). We use high-resolution near-IR integral field spectroscopic data from NIRSpec on JWST to observe the Orion Bar PDR as part of the PDRs4All JWST Early Release Science Program. The NIRSpec data reveal a forest of lines including, but not limited to, HeI, HI, and CI recombination lines, ionic lines, OI and NI fluorescence lines, Aromatic Infrared Bands (AIBs including aromatic CH, aliphatic CH, and their CD counterparts), CO2 ice, pure rotational and ro-vibrational lines from H2, and ro-vibrational lines HD, CO, and CH+, most of them detected for the first time towards a PDR. Their spatial distribution resolves the H and He ionisation structure in the Huygens region, gives insight into the geometry of the Bar, and confirms the large-scale stratification of PDRs. We observe numerous smaller scale structures whose typical size decreases with distance from Ori C and IR lines from CI, if solely arising from radiative recombination and cascade, reveal very high gas temperatures consistent with the hot irradiated surface of small-scale dense clumps deep inside the PDR. The H2 lines reveal multiple, prominent filaments which exhibit different characteristics. This leaves the impression of a "terraced" transition from the predominantly atomic surface region to the CO-rich molecular zone deeper in. This study showcases the discovery space created by JWST to further our understanding of the impact radiation from young stars has on their natal molecular cloud and proto-planetary disk, which touches on star- and planet formation as well as galaxy evolution.

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arXiv2023

Explaining the Chemical Inventory of Orion KL through Machine Learning

The interplay of the chemistry and physics that exists within astrochemically relevant sources can only be fully appreciated if we can gain a holistic understanding of their chemical inventories. Previous work by Lee et al. (2021) demonstrated the capabilities of simple regression models to reproduce the abundances of the chemical inventory of the Taurus Molecular Cloud 1 (TMC-1), as well as provide abundance predictions for new candidate molecules. It remains to be seen, however, to what degree TMC-1 is a ``unicorn'' in astrochemistry, where the simplicity of its chemistry and physics readily facilitates characterization with simple machine learning models. Here we present an extension in chemical complexity to a heavily studied high-mass star forming region: the Orion Kleinmann-Low (Orion KL) nebula. Unlike TMC-1, Orion KL is composed of several structurally distinct environments that differ chemically and kinematically, wherein the column densities of molecules between these components can have non-linear correlations that cause the unexpected appearance or even lack of likely species in various environments. This proof-of-concept study used similar regression models sampled by Lee et al. (2021) to accurately reproduce the column densities from the XCLASS fitting program presented in Crockett et al. (2014).

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arXiv2023

Astrochemical Modeling of Propargyl Radical Chemistry in TMC-1

Recent detections of aromatic species in dark molecular clouds suggest formation pathways may be efficient at very low temperatures and pressures, yet current astrochemical models are unable to account for their derived abundances, which can often deviate from model predictions by several orders of magnitude. The propargyl radical, a highly abundant species in the dark molecular cloud TMC- 1, is an important aromatic precursor in combustion flames and possibly interstellar environments. We performed astrochemical modeling of TMC-1 using the three-phase gas-grain code NAUTILUS and an updated chemical network, focused on refining the chemistry of the propargyl radical and related species. The abundance of the propargyl radical has been increased by half an order of magnitude compared to the previous GOTHAM network. This brings it closer in line with observations, but it remains underestimated by two orders of magnitude compared to its observed value. Predicted abundances for the chemically related C4H3N isomers within an order of magnitude of observed values corroborate the high efficiency of CN addition to closed-shell hydrocarbons under dark molecular cloud conditions. The results of our modeling provide insight into the chemical processes of the propargyl radical in dark molecular clouds and highlight the importance of resonance-stabilized radicals in PAH formation.

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arXiv2023

PDRs4All IV. An embarrassment of riches: Aromatic infrared bands in the Orion Bar

(Abridged) Mid-infrared observations of photodissociation regions (PDRs) are dominated by strong emission features called aromatic infrared bands (AIBs). The most prominent AIBs are found at 3.3, 6.2, 7.7, 8.6, and 11.2 $μ$m. The most sensitive, highest-resolution infrared spectral imaging data ever taken of the prototypical PDR, the Orion Bar, have been captured by JWST. We provide an inventory of the AIBs found in the Orion Bar, along with mid-IR template spectra from five distinct regions in the Bar: the molecular PDR, the atomic PDR, and the HII region. We use JWST NIRSpec IFU and MIRI MRS observations of the Orion Bar from the JWST Early Release Science Program, PDRs4All (ID: 1288). We extract five template spectra to represent the morphology and environment of the Orion Bar PDR. The superb sensitivity and the spectral and spatial resolution of these JWST observations reveal many details of the AIB emission and enable an improved characterization of their detailed profile shapes and sub-components. While the spectra are dominated by the well-known AIBs at 3.3, 6.2, 7.7, 8.6, 11.2, and 12.7 $μ$m, a wealth of weaker features and sub-components are present. We report trends in the widths and relative strengths of AIBs across the five template spectra. These trends yield valuable insight into the photochemical evolution of PAHs, such as the evolution responsible for the shift of 11.2 $μ$m AIB emission from class B$_{11.2}$ in the molecular PDR to class A$_{11.2}$ in the PDR surface layers. This photochemical evolution is driven by the increased importance of FUV processing in the PDR surface layers, resulting in a "weeding out" of the weakest links of the PAH family in these layers. For now, these JWST observations are consistent with a model in which the underlying PAH family is composed of a few species: the so-called 'grandPAHs'.

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arXiv2023

Low NH$_{3}$/H$_{2}$O ratio in comet C/2020 F3 (NEOWISE) at 0.7 au from the Sun

A lower-than-solar elemental nitrogen content has been demonstrated for several comets, including 1P/Halley and 67P/C-G with independent in situ measurements of volatile and refractory budgets. The recently discovered semi-refractory ammonium salts in 67P/C-G are thought to be the missing nitrogen reservoir in comets. The thermal desorption of ammonium salts from cometary dust particles leads to their decomposition into ammonia and a corresponding acid. The NH$_{3}$/H$_{2}$O ratio is expected to increase with decreasing heliocentric distance with evidence for this in near-infrared observations. NH$_{3}$ has been claimed to be more extended than expected for a nuclear source. Here, the aim is to constrain the NH$_{3}$/H$_{2}$O ratio in comet C/2020 F3 (NEOWISE) during its July 2020 passage. OH emission from comet C/2020 F3 (NEOWISE) was monitored for 2 months with NRT and observed from GBT on 24 July and 11 August 2020. Contemporaneously with the 24 July 2020 OH observations, the NH$_{3}$ hyperfine lines were targeted with GBT. The concurrent GBT and NRT observations allowed the OH quenching radius to be determined at $\left(5.96\pm0.10\right)\times10^{4}$ km on 24 July 2020, which is important for accurately deriving $Q(\text{OH})$. C/2020 F3 (NEOWISE) was a highly active comet with $Q(\text{H}_{2}\text{O}) \approx 2\times10^{30}$ molec s$^{-1}$ one day before perihelion. The $3σ$ upper limit for $Q_{\text{NH}_{3}}/Q_{\text{H}_{2}\text{O}}$ is $<0.29\%$ at $0.7$ au from the Sun. The obtained NH$_{3}$/H$_{2}$O ratio is a factor of a few lower than measurements for other comets at such heliocentric distances. The abundance of NH$_{3}$ may vary strongly with time depending on the amount of water-poor dust in the coma. Lifted dust can be heated, fragmented, and super-heated; whereby, ammonium salts, if present, can rapidly thermally disintegrate and modify the NH$_{3}$/H$_{2}$O ratio.

astro-ph.EP↗

arXiv2023

Implementation of Rare Isotopologues into Machine Learning of the Chemical Inventory of the Solar-Type Protostellar Source IRAS 16293-2422

Machine learning techniques have been previously used to model and predict column densities in the TMC-1 dark molecular cloud. In interstellar sources further along the path of star formation, such as those where a protostar itself has been formed, the chemistry is known to be drastically different from that of largely quiescent dark clouds. To that end, we have tested the ability of various machine learning models to fit the column densities of the molecules detected in source B of the Class 0 protostellar system IRAS 16293-2422. By including a simple encoding of isotopic composition in our molecular feature vectors, we also examine for the first time how well these models can replicate the isotopic ratios. Finally, we report the predicted column densities of the chemically relevant molecules that may be excellent targets for radioastronomical detection in IRAS 16293-2422B.

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arXiv2023

Detection of Interstellar $E$-1-cyano-1,3-butadiene in GOTHAM Observations of TMC-1

We report the detection of the lowest energy conformer of $E$-1-cyano-1,3-butadiene ($E$-1-C$_4$H$_5$CN), a linear isomer of pyridine, using the fourth data reduction of the GOTHAM deep spectral survey toward TMC-1 with the 100 m Green Bank Telescope. We performed velocity stacking and matched filter analyses using Markov chain Monte Carlo simulations and find evidence for the presence of this molecule at the 5.1$σ$ level. We derive a total column density of $3.8^{+1.0}_{-0.9}\times 10^{10}$ cm$^{-2}$, which is predominantly found toward two of the four velocity components we observe toward TMC-1. We use this molecule as a proxy for constraining the gas-phase abundance of the apolar hydrocarbon 1,3-butadiene. Based on the three-phase astrochemical modeling code NAUTILUS and an expanded chemical network, our model underestimates the abundance of cyano-1,3-butadiene by a factor of 19, with a peak column density of $2.34 \times 10^{10}\ \mathrm{cm}^{-2}$ for 1,3-butadiene. Compared to the modeling results obtained in previous GOTHAM analyses, the abundance of 1,3-butadiene is increased by about two orders of magnitude. Despite this increase, the modeled abundances of aromatic species do not appear to change and remain underestimated by 1--4 orders of magnitude. Meanwhile, the abundances of the five-membered ring molecules increase proportionally with 1,3-butadiene by two orders of magnitudes. We discuss implications for bottom-up formation routes to aromatic and polycyclic aromatic molecules.

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arXiv2023

An Ice Age JWST inventory of dense molecular cloud ices

Icy grain mantles are the main reservoir of the volatile elements that link chemical processes in dark, interstellar clouds with the formation of planets and composition of their atmospheres. The initial ice composition is set in the cold, dense parts of molecular clouds, prior to the onset of star formation. With the exquisite sensitivity of JWST, this critical stage of ice evolution is now accessible for detailed study. Here we show the first results of the Early Release Science program "Ice Age" that reveal the rich composition of these dense cloud ices. Weak ices, including, $^{13}$CO$_2$, OCN$^-$, $^{13}$CO, OCS, and COMs functional groups are now detected along two pre-stellar lines of sight. The $^{12}$CO$_2$ ice profile indicates modest growth of the icy grains. Column densities of the major and minor ice species indicate that ices contribute between 2 and 19% of the bulk budgets of the key C, O, N, and S elements. Our results suggest that the formation of simple and complex molecules could begin early in a water-ice rich environment.

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arXiv2023

Astronomical Detection of the Interstellar Anion C10H- towards TMC-1 from the GOTHAM Large Program on the GBT

Using data from the GOTHAM (GBT Observations of TMC-1: Hunting for Aromatic Molecules) survey, we report the first astronomical detection of the C10H- anion. The astronomical observations also provided the necessary data to refine the spectroscopic parameters of C10H-. From the velocity stacked data and the matched filter response, C10H- is detected at >9σ confidence level at a column density of 4.04e11 cm-2. A dedicated search for the C10H radical was also conducted towards TMC-1. In this case, the stacked molecular emission of C10H was detected at a ~3.2σ confidence interval at a column density of 2.02e11 cm-2. However, since the determined confidence level is currently <5σ, we consider the identification of C10H as tentative. The full GOTHAM dataset was also used to better characterize the physical parameters including column density, excitation temperature, linewidth, and source size for the C4H, C6H and C8H radicals and their respective anions, and the measured column densities were compared to the predictions from a gas/grain chemical formation model and from a machine learning analysis. Given the measured values, the C10H-/C10H column density ratio is ~2.0 - the highest value measured between an anion and neutral species to date. Such a high ratio is at odds with current theories for interstellar anion chemistry. For the radical species, both models can reproduce the measured abundances found from the survey; however, the machine learning analysis matches the detected anion abundances much better than the gas/grain chemical model, suggesting that the current understanding of the formation chemistry of molecular anions is still highly uncertain.

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