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Chandan K. Reddy

Publications and source records attributed to Chandan K. Reddy.

At least 73 records · Page 4Linked to original sources
arXiv2022

Towards Scalable Hyperbolic Neural Networks using Taylor Series Approximations

Hyperbolic networks have shown prominent improvements over their Euclidean counterparts in several areas involving hierarchical datasets in various domains such as computer vision, graph analysis, and natural language processing. However, their adoption in practice remains restricted due to (i) non-scalability on accelerated deep learning hardware, (ii) vanishing gradients due to the closure of hyperbolic space, and (iii) information loss due to frequent mapping between local tangent space and fully hyperbolic space. To tackle these issues, we propose the approximation of hyperbolic operators using Taylor series expansions, which allows us to reformulate the computationally expensive tangent and cosine hyperbolic functions into their polynomial equivariants which are more efficient. This allows us to retain the benefits of preserving the hierarchical anatomy of the hyperbolic space, while maintaining the scalability over current accelerated deep learning infrastructure. The polynomial formulation also enables us to utilize the advancements in Euclidean networks such as gradient clipping and ReLU activation to avoid vanishing gradients and remove errors due to frequent switching between tangent space and hyperbolic space. Our empirical evaluation on standard benchmarks in the domain of graph analysis and computer vision shows that our polynomial formulation is as scalable as Euclidean architectures, both in terms of memory and time complexity, while providing results as effective as hyperbolic models. Moreover, our formulation also shows a considerable improvement over its baselines due to our solution to vanishing gradients and information loss.

cs.LG↗
arXiv2022

Supervised Contrastive Learning for Interpretable Long-Form Document Matching

Recent advancements in deep learning techniques have transformed the area of semantic text matching. However, most state-of-the-art models are designed to operate with short documents such as tweets, user reviews, comments, etc. These models have fundamental limitations when applied to long-form documents such as scientific papers, legal documents, and patents. When handling such long documents, there are three primary challenges: (i) the presence of different contexts for the same word throughout the document, (ii) small sections of contextually similar text between two documents, but dissimilar text in the remaining parts (this defies the basic understanding of "similarity"), and (iii) the coarse nature of a single global similarity measure which fails to capture the heterogeneity of the document content. In this paper, we describe CoLDE: Contrastive Long Document Encoder - a transformer-based framework that addresses these challenges and allows for interpretable comparisons of long documents. CoLDE uses unique positional embeddings and a multi-headed chunkwise attention layer in conjunction with a supervised contrastive learning framework to capture similarity at three different levels: (i) high-level similarity scores between a pair of documents, (ii) similarity scores between different sections within and across documents, and (iii) similarity scores between different chunks in the same document and across other documents. These fine-grained similarity scores aid in better interpretability. We evaluate CoLDE on three long document datasets namely, ACL Anthology publications, Wikipedia articles, and USPTO patents. Besides outperforming the state-of-the-art methods on the document matching task, CoLDE is also robust to changes in document length and text perturbations and provides interpretable results.

cs.IR↗
arXiv2022

Self-Supervised Transformer for Sparse and Irregularly Sampled Multivariate Clinical Time-Series

Multivariate time-series data are frequently observed in critical care settings and are typically characterized by sparsity (missing information) and irregular time intervals. Existing approaches for learning representations in this domain handle these challenges by either aggregation or imputation of values, which in-turn suppresses the fine-grained information and adds undesirable noise/overhead into the machine learning model. To tackle this problem, we propose a Self-supervised Transformer for Time-Series (STraTS) model which overcomes these pitfalls by treating time-series as a set of observation triplets instead of using the standard dense matrix representation. It employs a novel Continuous Value Embedding technique to encode continuous time and variable values without the need for discretization. It is composed of a Transformer component with multi-head attention layers which enable it to learn contextual triplet embeddings while avoiding the problems of recurrence and vanishing gradients that occur in recurrent architectures. In addition, to tackle the problem of limited availability of labeled data (which is typically observed in many healthcare applications), STraTS utilizes self-supervision by leveraging unlabeled data to learn better representations by using time-series forecasting as an auxiliary proxy task. Experiments on real-world multivariate clinical time-series benchmark datasets demonstrate that STraTS has better prediction performance than state-of-the-art methods for mortality prediction, especially when labeled data is limited. Finally, we also present an interpretable version of STraTS which can identify important measurements in the time-series data. Our data preprocessing and model implementation codes are available at https://github.com/sindhura97/STraTS.

cs.LG↗
arXiv2021

Self-Supervised Graph Learning with Hyperbolic Embedding for Temporal Health Event Prediction

Electronic Health Records (EHR) have been heavily used in modern healthcare systems for recording patients' admission information to hospitals. Many data-driven approaches employ temporal features in EHR for predicting specific diseases, readmission times, or diagnoses of patients. However, most existing predictive models cannot fully utilize EHR data, due to an inherent lack of labels in supervised training for some temporal events. Moreover, it is hard for existing works to simultaneously provide generic and personalized interpretability. To address these challenges, we first propose a hyperbolic embedding method with information flow to pre-train medical code representations in a hierarchical structure. We incorporate these pre-trained representations into a graph neural network to detect disease complications, and design a multi-level attention method to compute the contributions of particular diseases and admissions, thus enhancing personalized interpretability. We present a new hierarchy-enhanced historical prediction proxy task in our self-supervised learning framework to fully utilize EHR data and exploit medical domain knowledge. We conduct a comprehensive set of experiments and case studies on widely used publicly available EHR datasets to verify the effectiveness of our model. The results demonstrate our model's strengths in both predictive tasks and interpretable abilities.

cs.LG↗
arXiv2021

Probabilistic Entity Representation Model for Reasoning over Knowledge Graphs

Logical reasoning over Knowledge Graphs (KGs) is a fundamental technique that can provide efficient querying mechanism over large and incomplete databases. Current approaches employ spatial geometries such as boxes to learn query representations that encompass the answer entities and model the logical operations of projection and intersection. However, their geometry is restrictive and leads to non-smooth strict boundaries, which further results in ambiguous answer entities. Furthermore, previous works propose transformation tricks to handle unions which results in non-closure and, thus, cannot be chained in a stream. In this paper, we propose a Probabilistic Entity Representation Model (PERM) to encode entities as a Multivariate Gaussian density with mean and covariance parameters to capture its semantic position and smooth decision boundary, respectively. Additionally, we also define the closed logical operations of projection, intersection, and union that can be aggregated using an end-to-end objective function. On the logical query reasoning problem, we demonstrate that the proposed PERM significantly outperforms the state-of-the-art methods on various public benchmark KG datasets on standard evaluation metrics. We also evaluate PERM's competence on a COVID-19 drug-repurposing case study and show that our proposed work is able to recommend drugs with substantially better F1 than current methods. Finally, we demonstrate the working of our PERM's query answering process through a low-dimensional visualization of the Gaussian representations.

cs.LG↗
arXiv2021

Fair Representation Learning using Interpolation Enabled Disentanglement

With the growing interest in the machine learning community to solve real-world problems, it has become crucial to uncover the hidden reasoning behind their decisions by focusing on the fairness and auditing the predictions made by these black-box models. In this paper, we propose a novel method to address two key issues: (a) Can we simultaneously learn fair disentangled representations while ensuring the utility of the learned representation for downstream tasks, and (b)Can we provide theoretical insights into when the proposed approach will be both fair and accurate. To address the former, we propose the method FRIED, Fair Representation learning using Interpolation Enabled Disentanglement. In our architecture, by imposing a critic-based adversarial framework, we enforce the interpolated points in the latent space to be more realistic. This helps in capturing the data manifold effectively and enhances the utility of the learned representation for downstream prediction tasks. We address the latter question by developing a theory on fairness-accuracy trade-offs using classifier-based conditional mutual information estimation. We demonstrate the effectiveness of FRIED on datasets of different modalities - tabular, text, and image datasets. We observe that the representations learned by FRIED are overall fairer in comparison to existing baselines and also accurate for downstream prediction tasks. Additionally, we evaluate FRIED on a real-world healthcare claims dataset where we conduct an expert aided model auditing study providing useful insights into opioid ad-diction patterns.

cs.LG↗
arXiv2021

Corpus-level and Concept-based Explanations for Interpretable Document Classification

Using attention weights to identify information that is important for models' decision-making is a popular approach to interpret attention-based neural networks. This is commonly realized in practice through the generation of a heat-map for every single document based on attention weights. However, this interpretation method is fragile, and easy to find contradictory examples. In this paper, we propose a corpus-level explanation approach, which aims to capture causal relationships between keywords and model predictions via learning the importance of keywords for predicted labels across a training corpus based on attention weights. Based on this idea, we further propose a concept-based explanation method that can automatically learn higher-level concepts and their importance to model prediction tasks. Our concept-based explanation method is built upon a novel Abstraction-Aggregation Network, which can automatically cluster important keywords during an end-to-end training process. We apply these methods to the document classification task and show that they are powerful in extracting semantically meaningful keywords and concepts. Our consistency analysis results based on an attention-based Naïve Bayes classifier also demonstrate these keywords and concepts are important for model predictions.

cs.IR↗
arXiv2021

An Interpretable and Uncertainty Aware Multi-Task Framework for Multi-Aspect Sentiment Analysis

In recent years, several online platforms have seen a rapid increase in the number of review systems that request users to provide aspect-level feedback. Document-level Multi-aspect Sentiment Classification (DMSC), where the goal is to predict the ratings/sentiment from a review at an individual aspect level, has become a challenging and imminent problem. To tackle this challenge, we propose a deliberate self-attention-based deep neural network model, namely FEDAR, for the DMSC problem, which can achieve competitive performance while also being able to interpret the predictions made. FEDAR is equipped with a highway word embedding layer to transfer knowledge from pre-trained word embeddings, an RNN encoder layer with output features enriched by pooling and factorization techniques, and a deliberate self-attention layer. In addition, we also propose an Attention-driven Keywords Ranking (AKR) method, which can automatically discover aspect keywords and aspect-level opinion keywords from the review corpus based on the attention weights. These keywords are significant for rating predictions by FEDAR. Since crowdsourcing annotation can be an alternate way to recover missing ratings of reviews, we propose a LEcture-AuDience (LEAD) strategy to estimate model uncertainty in the context of multi-task learning, so that valuable human resources can focus on the most uncertain predictions. Our extensive set of experiments on five different open-domain DMSC datasets demonstrate the superiority of the proposed FEDAR and LEAD models. We further introduce two new DMSC datasets in the healthcare domain and benchmark different baseline models and our models on them. Attention weights visualization results and visualization of aspect and opinion keywords demonstrate the interpretability of our model and the effectiveness of our AKR method.

cs.CL↗
arXiv2021

Collaborative Graph Learning with Auxiliary Text for Temporal Event Prediction in Healthcare

Accurate and explainable health event predictions are becoming crucial for healthcare providers to develop care plans for patients. The availability of electronic health records (EHR) has enabled machine learning advances in providing these predictions. However, many deep learning based methods are not satisfactory in solving several key challenges: 1) effectively utilizing disease domain knowledge; 2) collaboratively learning representations of patients and diseases; and 3) incorporating unstructured text. To address these issues, we propose a collaborative graph learning model to explore patient-disease interactions and medical domain knowledge. Our solution is able to capture structural features of both patients and diseases. The proposed model also utilizes unstructured text data by employing an attention regulation strategy and then integrates attentive text features into a sequential learning process. We conduct extensive experiments on two important healthcare problems to show the competitive prediction performance of the proposed method compared with various state-of-the-art models. We also confirm the effectiveness of learned representations and model interpretability by a set of ablation and case studies.

cs.LG↗
arXiv2021

Self-Supervised Hyperboloid Representations from Logical Queries over Knowledge Graphs

Knowledge Graphs (KGs) are ubiquitous structures for information storagein several real-world applications such as web search, e-commerce, social networks, and biology. Querying KGs remains a foundational and challenging problem due to their size and complexity. Promising approaches to tackle this problem include embedding the KG units (e.g., entities and relations) in a Euclidean space such that the query embedding contains the information relevant to its results. These approaches, however, fail to capture the hierarchical nature and semantic information of the entities present in the graph. Additionally, most of these approaches only utilize multi-hop queries (that can be modeled by simple translation operations) to learn embeddings and ignore more complex operations such as intersection and union of simpler queries. To tackle such complex operations, in this paper, we formulate KG representation learning as a self-supervised logical query reasoning problem that utilizes translation, intersection and union queries over KGs. We propose Hyperboloid Embeddings (HypE), a novel self-supervised dynamic reasoning framework, that utilizes positive first-order existential queries on a KG to learn representations of its entities and relations as hyperboloids in a Poincaré ball. HypE models the positive first-order queries as geometrical translation, intersection, and union. For the problem of KG reasoning in real-world datasets, the proposed HypE model significantly outperforms the state-of-the art results. We also apply HypE to an anomaly detection task on a popular e-commerce website product taxonomy as well as hierarchically organized web articles and demonstrate significant performance improvements compared to existing baseline methods. Finally, we also visualize the learned HypE embeddings in a Poincaré ball to clearly interpret and comprehend the representation space.

cs.LG↗
arXiv2021

Jekyll: Attacking Medical Image Diagnostics using Deep Generative Models

Advances in deep neural networks (DNNs) have shown tremendous promise in the medical domain. However, the deep learning tools that are helping the domain, can also be used against it. Given the prevalence of fraud in the healthcare domain, it is important to consider the adversarial use of DNNs in manipulating sensitive data that is crucial to patient healthcare. In this work, we present the design and implementation of a DNN-based image translation attack on biomedical imagery. More specifically, we propose Jekyll, a neural style transfer framework that takes as input a biomedical image of a patient and translates it to a new image that indicates an attacker-chosen disease condition. The potential for fraudulent claims based on such generated 'fake' medical images is significant, and we demonstrate successful attacks on both X-rays and retinal fundus image modalities. We show that these attacks manage to mislead both medical professionals and algorithmic detection schemes. Lastly, we also investigate defensive measures based on machine learning to detect images generated by Jekyll.

cs.CR↗
arXiv2021

Self-Supervised Learning of Contextual Embeddings for Link Prediction in Heterogeneous Networks

Representation learning methods for heterogeneous networks produce a low-dimensional vector embedding for each node that is typically fixed for all tasks involving the node. Many of the existing methods focus on obtaining a static vector representation for a node in a way that is agnostic to the downstream application where it is being used. In practice, however, downstream tasks such as link prediction require specific contextual information that can be extracted from the subgraphs related to the nodes provided as input to the task. To tackle this challenge, we develop SLiCE, a framework bridging static representation learning methods using global information from the entire graph with localized attention driven mechanisms to learn contextual node representations. We first pre-train our model in a self-supervised manner by introducing higher-order semantic associations and masking nodes, and then fine-tune our model for a specific link prediction task. Instead of training node representations by aggregating information from all semantic neighbors connected via metapaths, we automatically learn the composition of different metapaths that characterize the context for a specific task without the need for any pre-defined metapaths. SLiCE significantly outperforms both static and contextual embedding learning methods on several publicly available benchmark network datasets. We also interpret the semantic association matrix and provide its utility and relevance in making successful link predictions between heterogeneous nodes in the network.

cs.LG↗
arXiv2021

T-Miner: A Generative Approach to Defend Against Trojan Attacks on DNN-based Text Classification

Deep Neural Network (DNN) classifiers are known to be vulnerable to Trojan or backdoor attacks, where the classifier is manipulated such that it misclassifies any input containing an attacker-determined Trojan trigger. Backdoors compromise a model's integrity, thereby posing a severe threat to the landscape of DNN-based classification. While multiple defenses against such attacks exist for classifiers in the image domain, there have been limited efforts to protect classifiers in the text domain. We present Trojan-Miner (T-Miner) -- a defense framework for Trojan attacks on DNN-based text classifiers. T-Miner employs a sequence-to-sequence (seq-2-seq) generative model that probes the suspicious classifier and learns to produce text sequences that are likely to contain the Trojan trigger. T-Miner then analyzes the text produced by the generative model to determine if they contain trigger phrases, and correspondingly, whether the tested classifier has a backdoor. T-Miner requires no access to the training dataset or clean inputs of the suspicious classifier, and instead uses synthetically crafted "nonsensical" text inputs to train the generative model. We extensively evaluate T-Miner on 1100 model instances spanning 3 ubiquitous DNN model architectures, 5 different classification tasks, and a variety of trigger phrases. We show that T-Miner detects Trojan and clean models with a 98.75% overall accuracy, while achieving low false positives on clean models. We also show that T-Miner is robust against a variety of targeted, advanced attacks from an adaptive attacker.

cs.CR↗
arXiv2020

A Simple and Effective Self-Supervised Contrastive Learning Framework for Aspect Detection

Unsupervised aspect detection (UAD) aims at automatically extracting interpretable aspects and identifying aspect-specific segments (such as sentences) from online reviews. However, recent deep learning-based topic models, specifically aspect-based autoencoder, suffer from several problems, such as extracting noisy aspects and poorly mapping aspects discovered by models to the aspects of interest. To tackle these challenges, in this paper, we first propose a self-supervised contrastive learning framework and an attention-based model equipped with a novel smooth self-attention (SSA) module for the UAD task in order to learn better representations for aspects and review segments. Secondly, we introduce a high-resolution selective mapping (HRSMap) method to efficiently assign aspects discovered by the model to aspects of interest. We also propose using a knowledge distilling technique to further improve the aspect detection performance. Our methods outperform several recent unsupervised and weakly supervised approaches on publicly available benchmark user review datasets. Aspect interpretation results show that extracted aspects are meaningful, have good coverage, and can be easily mapped to aspects of interest. Ablation studies and attention weight visualization also demonstrate the effectiveness of SSA and the knowledge distilling method.

cs.CL↗
arXiv2020

Differentially Private Synthetic Medical Data Generation using Convolutional GANs

Deep learning models have demonstrated superior performance in several application problems, such as image classification and speech processing. However, creating a deep learning model using health record data requires addressing certain privacy challenges that bring unique concerns to researchers working in this domain. One effective way to handle such private data issues is to generate realistic synthetic data that can provide practically acceptable data quality and correspondingly the model performance. To tackle this challenge, we develop a differentially private framework for synthetic data generation using Rényi differential privacy. Our approach builds on convolutional autoencoders and convolutional generative adversarial networks to preserve some of the critical characteristics of the generated synthetic data. In addition, our model can also capture the temporal information and feature correlations that might be present in the original data. We demonstrate that our model outperforms existing state-of-the-art models under the same privacy budget using several publicly available benchmark medical datasets in both supervised and unsupervised settings.

cs.LG↗
arXiv2020

Neural Abstractive Text Summarization with Sequence-to-Sequence Models

In the past few years, neural abstractive text summarization with sequence-to-sequence (seq2seq) models have gained a lot of popularity. Many interesting techniques have been proposed to improve seq2seq models, making them capable of handling different challenges, such as saliency, fluency and human readability, and generate high-quality summaries. Generally speaking, most of these techniques differ in one of these three categories: network structure, parameter inference, and decoding/generation. There are also other concerns, such as efficiency and parallelism for training a model. In this paper, we provide a comprehensive literature survey on different seq2seq models for abstractive text summarization from the viewpoint of network structures, training strategies, and summary generation algorithms. Several models were first proposed for language modeling and generation tasks, such as machine translation, and later applied to abstractive text summarization. Hence, we also provide a brief review of these models. As part of this survey, we also develop an open source library, namely, Neural Abstractive Text Summarizer (NATS) toolkit, for the abstractive text summarization. An extensive set of experiments have been conducted on the widely used CNN/Daily Mail dataset to examine the effectiveness of several different neural network components. Finally, we benchmark two models implemented in NATS on the two recently released datasets, namely, Newsroom and Bytecup.

cs.CL↗
arXiv2020

Image Hashing by Minimizing Discrete Component-wise Wasserstein Distance

Image hashing is one of the fundamental problems that demand both efficient and effective solutions for various practical scenarios. Adversarial autoencoders are shown to be able to implicitly learn a robust, locality-preserving hash function that generates balanced and high-quality hash codes. However, the existing adversarial hashing methods are inefficient to be employed for large-scale image retrieval applications. Specifically, they require an exponential number of samples to be able to generate optimal hash codes and a significantly high computational cost to train. In this paper, we show that the high sample-complexity requirement often results in sub-optimal retrieval performance of the adversarial hashing methods. To address this challenge, we propose a new adversarial-autoencoder hashing approach that has a much lower sample requirement and computational cost. Specifically, by exploiting the desired properties of the hash function in the low-dimensional, discrete space, our method efficiently estimates a better variant of Wasserstein distance by averaging a set of easy-to-compute one-dimensional Wasserstein distances. The resulting hashing approach has an order-of-magnitude better sample complexity, thus better generalization property, compared to the other adversarial hashing methods. In addition, the computational cost is significantly reduced using our approach. We conduct experiments on several real-world datasets and show that the proposed method outperforms the competing hashing methods, achieving up to 10% improvement over the current state-of-the-art image hashing methods. The code accompanying this paper is available on Github (https://github.com/khoadoan/adversarial-hashing).

cs.IR↗
arXiv2020

Image Generation Via Minimizing Fréchet Distance in Discriminator Feature Space

For a given image generation problem, the intrinsic image manifold is often low dimensional. We use the intuition that it is much better to train the GAN generator by minimizing the distributional distance between real and generated images in a small dimensional feature space representing such a manifold than on the original pixel-space. We use the feature space of the GAN discriminator for such a representation. For distributional distance, we employ one of two choices: the Fréchet distance or direct optimal transport (OT); these respectively lead us to two new GAN methods: Fréchet-GAN and OT-GAN. The idea of employing Fréchet distance comes from the success of Fréchet Inception Distance as a solid evaluation metric in image generation. Fréchet-GAN is attractive in several ways. We propose an efficient, numerically stable approach to calculate the Fréchet distance and its gradient. The Fréchet distance estimation requires a significantly less computation time than OT; this allows Fréchet-GAN to use much larger mini-batch size in training than OT. More importantly, we conduct experiments on a number of benchmark datasets and show that Fréchet-GAN (in particular) and OT-GAN have significantly better image generation capabilities than the existing representative primal and dual GAN approaches based on the Wasserstein distance.

cs.CV↗