arXiv subjects

Clarice D. Aiello

Publications and source records attributed to Clarice D. Aiello.

13 recordsLinked to original sources

arXiv2026

A physicist-friendly primer on the Hamiltonian for quantum sensing in proteins: analytical expressions and insights for a toy model of the radical-pair mechanism

Electron spin-dependent chemical reactions in proteins, often discussed under the 'radical-pair mechanism', remain the leading microscopic proposal for magnetic field sensing in biology. Yet the essential physics is often obscured by the complexity of realistic models. In this work, we present a physicist-friendly primer on the simplest radical-pair Hamiltonian that already captures many of the mechanism's best-known qualitative features. The contributions of this work are fourfold. First, we place on record a complete analytical solution of this toy model, which has previously been studied extensively, mostly through numerical and partial analytical approaches. Working in the experimentally relevant singlet-triplet basis, we derive closed-form expressions for the instantaneous singlet population and for two related time-averaged singlet yields. Second, we introduce a new interpretation of these results that makes several familiar features of radical-pair physics transparent. In particular, we show that the dynamics admit a bright-dark decomposition (in the sense of spin mixing), similar to structures studied in atomic physics. Third, through this bright-dark perspective, we clarify experimentally relevant features of the toy model. In particular, we show that the so-called 'low-field effect' arises from a coherence term between bright and dark sectors, and that the special role of zero field is best understood as a phase-locking phenomenon rather than merely as enhanced mixing. Fourth, we import methods developed in the context of technological quantum sensing to obtain further insight into the model. This allows us to clarify the role of initial state preparation and the trade-off between coherent phase accumulation and time-averaging penalties. The resulting toy model serves both as an analytically tractable benchmark and as a conceptual starting point for future work.

physics.bio-ph↗

arXiv2025

Mind the Gap: From Resolving Theoretical Foundations of Chiral(ity)-Induced Spin Selectivity to Pioneering Implementations in Quantum Sensing

The chiral(ity)-induced spin selectivity (CISS) effect, where electrons passing through a chiral medium acquire significant spin-polarization at ambient temperatures, has been widely observed experimentally, yet its theoretical foundations remain actively debated. Open questions persist regarding whether CISS originates from helical geometry or more general chirality, and whether a unified mechanism can account for phenomena across solid-state and soft-matter systems, mesoscopic films, and single molecules. Clarifying the interrelations between existing models is essential to determine if a universal picture of CISS can be found or whether system-specific models are required, and if so, where their common starting point should lie for a workable classification of CISS manifestations. Despite this theoretical fragmentation, recent studies of CISS effects in electron transfer systems, magnetic field sensitivity and coherence of radical pair reactions, polarized electroluminescence in chiral hybrid perovskites, DNA-based biosensors, and enantioselective detection, highlight its broad conceptual relevance and potential applications in spintronics, molecular sensors, and quantum information processing. In this review, we help bridge the gap between theory, experiment, and implementation, with a particular focus on prospects for quantum sensing and metrology. We outline fundamental frameworks of CISS, clarifying what constitutes the `chiral', the `induced', and the `spin-selectivity' that makes up CISS, before going on to survey key model realizations and their assumptions. We examine some of the emerging quantum sensing applications and assess the model-specific implications, in particular exemplifying these in the context of spin-correlated radical pairs, which offer a promising, tunable, and biomimetic platform for emerging molecular quantum technologies.

physics.chem-ph↗

arXiv2024

Automated 1D Helmholtz coil design for cell biology: Weak magnetic fields alter cytoskeleton dynamics

For more than fifty years, scientists have been gathering evidence of the biological impacts of weak magnetic fields. However, the lack of systematics in experimental studies has hampered research progress on this subject. To systematically quantify magnetic field effects in cell biology, it is crucial to produce fields that can be automatically adjusted and that are stable throughout an experiment's duration, usually operating inside an incubator. Here, we report on the design of a fully automated 1D Helmholtz coil setup that is internally water cooled, thus eliminating any confounding effects caused by temperature fluctuations. The coils also allow cells to be exposed to magnetic fields from multiple directions through automated controlled rotation. Preliminary data, acquired with the coils placed inside an incubator and on a rat vascular smooth muscle cell line, confirm previous reports that both microtubule and actin polymerization and dynamics are altered by weak magnetic fields.

physics.bio-ph↗

arXiv2024

Simulating spin biology using a digital quantum computer: Prospects on a near-term quantum hardware emulator

Understanding the intricate quantum spin dynamics of radical pair reactions is crucial for unraveling the underlying nature of chemical processes across diverse scientific domains. In this work, we leverage Trotterization to map coherent radical pair spin dynamics onto a digital gate-based quantum simulation. Our results demonstrated agreement between the idealized noiseless quantum circuit simulation and established master equation approaches for homogeneous radical pair recombination, identifying approximately 15 Trotter steps to be sufficient for faithfully reproducing the coupled spin dynamics of a prototypical system. By utilizing this computational technique to study the dynamics of spin systems of biological relevance, our findings underscore the potential of digital quantum simulation (DQS) of complex radical pair reactions and builds the groundwork towards more utilitarian investigations into their intricate reaction dynamics. We further investigate the effect of realistic error models on our DQS approach, and provide an upper limit for the number of Trotter steps that can currently be applied in the absence of error mitigation techniques before losing simulation accuracy to deleterious noise effects.

quant-ph↗

arXiv2023

The Biological Qubit: Calcium Phosphate Dimers, not Trimers

The Posner molecule (calcium phosphate trimer), has been hypothesized to function as a biological quantum information processor due to its supposedly long-lived entangled $^{31}$P nuclear spin states. This hypothesis was challenged by our recent finding that the molecule lacks a well-defined rotational axis of symmetry -- an essential assumption in the proposal for Posner-mediated neural processing -- and exists as an asymmetric dynamical ensemble. Following up, we investigate here the spin dynamics of the molecule's entangled $^{31}$P nuclear spins within the asymmetric ensemble. Our simulations show that entanglement between two nuclear spins prepared in a Bell state in separate Posner molecules decays on a sub-second timescale -- much faster than previously hypothesized, and not long enough for super-cellular neuronal processing. Calcium phosphate dimers however, are found to be surprisingly resilient to decoherence and are able to preserve entangled nuclear spins for hundreds of seconds, suggesting that neural processing might occur through them instead.

quant-ph↗

arXiv2021

A Chirality-Based Quantum Leap

Chiral degrees of freedom occur in matter and in electromagnetic fields and constitute an area of research that is experiencing renewed interest driven by recent observations of the chiral-induced spin selectivity (CISS) effect in chiral molecules and engineered nanomaterials. The CISS effect underpins the fact that charge transport through nanoscopic chiral structures favors a particular electronic spin orientation, resulting in large room-temperature spin polarizations. Observations of the CISS effect suggest opportunities for spin control and for the design and fabrication of room-temperature quantum devices from the bottom up, with atomic-scale precision. Any technology that relies on optimal charge transport, including quantum devices for logic, sensing, and storage, may benefit from chiral quantum properties. These properties can be theoretically and experimentally investigated from a quantum information perspective, which is presently lacking. There are uncharted implications for the quantum sciences once chiral couplings can be engineered to control the storage, transduction, and manipulation of quantum information. This forward-looking perspective provides a survey of the experimental and theoretical fundamentals of chiral-influenced quantum effects, and presents a vision for their future roles in enabling room-temperature quantum technologies.

cond-mat.mes-hall↗

arXiv2021

The Dynamical Ensemble of the Posner Molecule is not Symmetric

The Posner molecule, $\text{Ca}_9(\text{PO}_4)_6$, has long been recognized to have biochemical relevance in various physiological processes. It has found recent attention for its possible role as a biological quantum information processor, whereby the molecule purportedly maintains long-lived nuclear spin coherences among its ${^{31}\text{P}}$ nuclei (presumed to be symmetrically arranged), allowing it to function as a room temperature qubit. The structure of the molecule has been of much dispute in the literature, although the $\text{S}_6$ point group symmetry has often been assumed and exploited in calculations. Using a variety of simulation techniques (including ab initio molecular dynamics and structural relaxation), rigorous data analysis tools and by exploring thousands of individual configurations, we establish that the molecule predominantly assumes low symmetry structures ($\text{C}_\text{s}$ and $\text{C}_\text{i}$) at room temperature, as opposed to the higher symmetry configurations explored previously. Our findings have important implications on the viability of this molecule as a qubit.

quant-ph↗

arXiv2020

Achieving a quantum smart workforce

Interest in building dedicated Quantum Information Science and Engineering (QISE) education programs has greatly expanded in recent years. These programs are inherently convergent, complex, often resource intensive and likely require collaboration with a broad variety of stakeholders. In order to address this combination of challenges, we have captured ideas from many members in the community. This manuscript not only addresses policy makers and funding agencies (both public and private and from the regional to the international level) but also contains needs identified by industry leaders and discusses the difficulties inherent in creating an inclusive QISE curriculum. We report on the status of eighteen post-secondary education programs in QISE and provide guidance for building new programs. Lastly, we encourage the development of a comprehensive strategic plan for quantum education and workforce development as a means to make the most of the ongoing substantial investments being made in QISE.

physics.ed-ph↗

arXiv2018

Cathodoluminescence-based nanoscopic thermometry in a lanthanide-doped phosphor

Crucial to analyze phenomena as varied as plasmonic hot spots and the spread of cancer in living tissue, nanoscale thermometry is challenging: probes are usually larger than the sample under study, and contact techniques may alter the sample temperature itself. Many photostable nanomaterials whose luminescence is temperature-dependent, such as lanthanide-doped phosphors, have been shown to be good non-contact thermometric sensors when optically excited. Using such nanomaterials, in this work we accomplished the key milestone of enabling far-field thermometry with a spatial resolution that is not diffraction-limited at readout. We explore thermal effects on the cathodoluminescence of lanthanide-doped NaYF$_4$ nanoparticles. Whereas cathodoluminescence from such lanthanide-doped nanomaterials has been previously observed, here we use quantitative features of such emission for the first time towards an application beyond localization. We demonstrate a thermometry scheme that is based on cathodoluminescence lifetime changes as a function of temperature that achieves $\sim$ 30 mK sensitivity in sub-$μ$m nanoparticle patches. The scheme is robust against spurious effects related to electron beam radiation damage and optical alignment fluctuations. We foresee the potential of single nanoparticles, of sheets of nanoparticles, and also of thin films of lanthanide-doped NaYF$_4$ to yield temperature information via cathodoluminescence changes when in the vicinity of a sample of interest; the phosphor may even protect the sample from direct contact to damaging electron beam radiation. Cathodoluminescence-based thermometry is thus a valuable novel tool towards temperature monitoring at the nanoscale, with broad applications including heat dissipation in miniaturized electronics and biological diagnostics.

cond-mat.mes-hall↗

arXiv2014

Algebraic synthesis of time-optimal unitaries in SU(2) with alternating controls

We present an algebraic framework to study the time-optimal synthesis of arbitrary unitaries in SU(2), when the control set is restricted to rotations around two non-parallel axes in the Bloch sphere. Our method bypasses commonly used control-theoretical techniques, and easily imposes necessary conditions on time-optimal sequences. In a straightforward fashion, we prove that time-optimal sequences are solely parametrized by three rotation angles and derive general bounds on those angles as a function of the relative rotation speed of each control and the angle between the axes. Results are substantially different whether both clockwise and counterclockwise rotations about the given axes are allowed, or only clockwise rotations. In the first case, we prove that any finite time-optimal sequence is composed at most of five control concatenations, while for the more restrictive case, we present scaling laws on the maximum length of any finite time-optimal sequence. The bounds we find for both cases are stricter than previously published ones and severely constrain the structure of time-optimal sequences, allowing for an efficient numerical search of the time-optimal solution. Our results can be used to find the time-optimal evolution of qubit systems under the action of the considered control set, and thus potentially increase the number of realizable unitaries before decoherence.

quant-ph↗

arXiv2014

The NV center as a quantum actuator: time-optimal control of nuclear spins

Indirect control of qubits by a quantum actuator has been proposed as an appealing strategy to manipulate qubits that couple only weakly to external fields. While universal quantum control can be easily achieved when the actuator-qubit coupling is anisotropic, the efficiency of this approach is less clear. Here we analyze the time-efficiency of the quantum actuator control. We describe a strategy to find time-optimal control sequence by the quantum actuator and compare their gate times with direct driving, identifying regimes where the actuator control performs faster. As an example, we focus on a specific implementation based on the Nitrogen-Vacancy center electronic spin in diamond (the actuator) and nearby carbon-13 nuclear spins (the qubits).

quant-ph↗

arXiv2012

Composite-pulse magnetometry with a solid-state quantum sensor

The sensitivity of quantum magnetometers is challenged by control errors and, especially in the solid-state, by their short coherence times. Refocusing techniques can overcome these limitations and improve the sensitivity to periodic fields, but they come at the cost of reduced bandwidth and cannot be applied to sense static (DC) or aperiodic fields. Here we experimentally demonstrate that continuous driving of the sensor spin by a composite pulse known as rotary-echo (RE) yields a flexible magnetometry scheme, mitigating both driving power imperfections and decoherence. A suitable choice of RE parameters compensates for different scenarios of noise strength and origin. The method can be applied to nanoscale sensing in variable environments or to realize noise spectroscopy. In a room-temperature implementation based on a single electronic spin in diamond, composite-pulse magnetometry provides a tunable trade-off between sensitivities in the microT/sqrt(Hz) range, comparable to those obtained with Ramsey spectroscopy, and coherence times approaching T1.

quant-ph↗

arXiv2012

Continuous dynamical decoupling magnetometry

Solid-state qubits hold the promise to achieve unmatched combination of sensitivity and spatial resolution. To achieve their potential, the qubits need however to be shielded from the deleterious effects of the environment. While dynamical decoupling techniques can improve the coherence time, they impose a compromise between sensitivity and bandwidth, since to higher decoupling power correspond higher frequencies of the field to be measured. Moreover, the performance of pulse sequences is ultimately limited by control bounds and errors. Here we analyze a versatile alternative based on continuous driving. We find that continuous dynamical decoupling schemes can be used for AC magnetometry, providing similar frequency constraints on the AC field and improved sensitivity for some noise regimes. In addition, the exibility of phase and amplitude modulation could yield superior robustness to driving errors and a better adaptability to external experimental scenarios.

quant-ph↗