arXiv subjects

Dragomir Radev

Publications and source records attributed to Dragomir Radev.

At least 37 records · Page 2Linked to original sources

arXiv2023

EHRKit: A Python Natural Language Processing Toolkit for Electronic Health Record Texts

The Electronic Health Record (EHR) is an essential part of the modern medical system and impacts healthcare delivery, operations, and research. Unstructured text is attracting much attention despite structured information in the EHRs and has become an exciting research field. The success of the recent neural Natural Language Processing (NLP) method has led to a new direction for processing unstructured clinical notes. In this work, we create a python library for clinical texts, EHRKit. This library contains two main parts: MIMIC-III-specific functions and tasks specific functions. The first part introduces a list of interfaces for accessing MIMIC-III NOTEEVENTS data, including basic search, information retrieval, and information extraction. The second part integrates many third-party libraries for up to 12 off-shelf NLP tasks such as named entity recognition, summarization, machine translation, etc.

cs.CL↗

arXiv2023

BLOOM: A 176B-Parameter Open-Access Multilingual Language Model

Large language models (LLMs) have been shown to be able to perform new tasks based on a few demonstrations or natural language instructions. While these capabilities have led to widespread adoption, most LLMs are developed by resource-rich organizations and are frequently kept from the public. As a step towards democratizing this powerful technology, we present BLOOM, a 176B-parameter open-access language model designed and built thanks to a collaboration of hundreds of researchers. BLOOM is a decoder-only Transformer language model that was trained on the ROOTS corpus, a dataset comprising hundreds of sources in 46 natural and 13 programming languages (59 in total). We find that BLOOM achieves competitive performance on a wide variety of benchmarks, with stronger results after undergoing multitask prompted finetuning. To facilitate future research and applications using LLMs, we publicly release our models and code under the Responsible AI License.

cs.CL↗

arXiv2023

RobuT: A Systematic Study of Table QA Robustness Against Human-Annotated Adversarial Perturbations

Despite significant progress having been made in question answering on tabular data (Table QA), it's unclear whether, and to what extent existing Table QA models are robust to task-specific perturbations, e.g., replacing key question entities or shuffling table columns. To systematically study the robustness of Table QA models, we propose a benchmark called RobuT, which builds upon existing Table QA datasets (WTQ, WikiSQL-Weak, and SQA) and includes human-annotated adversarial perturbations in terms of table header, table content, and question. Our results indicate that both state-of-the-art Table QA models and large language models (e.g., GPT-3) with few-shot learning falter in these adversarial sets. We propose to address this problem by using large language models to generate adversarial examples to enhance training, which significantly improves the robustness of Table QA models. Our data and code is publicly available at https://github.com/yilunzhao/RobuT.

cs.CL↗

arXiv2023

MACSum: Controllable Summarization with Mixed Attributes

Controllable summarization allows users to generate customized summaries with specified attributes. However, due to the lack of designated annotations of controlled summaries, existing works have to craft pseudo datasets by adapting generic summarization benchmarks. Furthermore, most research focuses on controlling single attributes individually (e.g., a short summary or a highly abstractive summary) rather than controlling a mix of attributes together (e.g., a short and highly abstractive summary). In this paper, we propose MACSum, the first human-annotated summarization dataset for controlling mixed attributes. It contains source texts from two domains, news articles and dialogues, with human-annotated summaries controlled by five designed attributes (Length, Extractiveness, Specificity, Topic, and Speaker). We propose two simple and effective parameter-efficient approaches for the new task of mixed controllable summarization based on hard prompt tuning and soft prefix tuning. Results and analysis demonstrate that hard prompt models yield the best performance on all metrics and human evaluations. However, mixed-attribute control is still challenging for summarization tasks. Our dataset and code are available at https://github.com/psunlpgroup/MACSum.

cs.CL↗

arXiv2023

Explicit Knowledge Transfer for Weakly-Supervised Code Generation

Large language models (LLMs) can acquire strong code-generation capabilities through few-shot learning. In contrast, supervised fine-tuning is still needed for smaller models to achieve good performance. Such fine-tuning demands a large number of task-specific NL-code pairs, which are expensive to obtain. In this paper, we attempt to transfer the code generation ability of an LLM to a smaller model with the aid of weakly-supervised data. More specifically, we propose explicit knowledge transfer (EKT), which uses the few-shot capabilities of a teacher LLM to create NL-code pairs that we then filter for correctness and fine-tune the student on. We evaluate EKT on the task of generating code solutions to math word problems from the GSM8k dataset. We find that EKT not only yields better performance than training with expert iteration, but also outperforms knowledge distillation, another form of knowledge transfer. A GPT-Neo 1.3B model trained using EKT with a GPT-J teacher achieves a 12.4% pass@100 on GSM8k, while the same student and teacher trained with knowledge distillation yield only a 3.7% pass@100. We also show that it is possible for a student model to outperform the teacher using EKT.

cs.CL↗

arXiv2023

bgGLUE: A Bulgarian General Language Understanding Evaluation Benchmark

We present bgGLUE(Bulgarian General Language Understanding Evaluation), a benchmark for evaluating language models on Natural Language Understanding (NLU) tasks in Bulgarian. Our benchmark includes NLU tasks targeting a variety of NLP problems (e.g., natural language inference, fact-checking, named entity recognition, sentiment analysis, question answering, etc.) and machine learning tasks (sequence labeling, document-level classification, and regression). We run the first systematic evaluation of pre-trained language models for Bulgarian, comparing and contrasting results across the nine tasks in the benchmark. The evaluation results show strong performance on sequence labeling tasks, but there is a lot of room for improvement for tasks that require more complex reasoning. We make bgGLUE publicly available together with the fine-tuning and the evaluation code, as well as a public leaderboard at https://bgglue.github.io/, and we hope that it will enable further advancements in developing NLU models for Bulgarian.

cs.CL↗

arXiv2023

Revisiting the Gold Standard: Grounding Summarization Evaluation with Robust Human Evaluation

Human evaluation is the foundation upon which the evaluation of both summarization systems and automatic metrics rests. However, existing human evaluation studies for summarization either exhibit a low inter-annotator agreement or have insufficient scale, and an in-depth analysis of human evaluation is lacking. Therefore, we address the shortcomings of existing summarization evaluation along the following axes: (1) We propose a modified summarization salience protocol, Atomic Content Units (ACUs), which is based on fine-grained semantic units and allows for a high inter-annotator agreement. (2) We curate the Robust Summarization Evaluation (RoSE) benchmark, a large human evaluation dataset consisting of 22,000 summary-level annotations over 28 top-performing systems on three datasets. (3) We conduct a comparative study of four human evaluation protocols, underscoring potential confounding factors in evaluation setups. (4) We evaluate 50 automatic metrics and their variants using the collected human annotations across evaluation protocols and demonstrate how our benchmark leads to more statistically stable and significant results. The metrics we benchmarked include recent methods based on large language models (LLMs), GPTScore and G-Eval. Furthermore, our findings have important implications for evaluating LLMs, as we show that LLMs adjusted by human feedback (e.g., GPT-3.5) may overfit unconstrained human evaluation, which is affected by the annotators' prior, input-agnostic preferences, calling for more robust, targeted evaluation methods.

cs.CL↗

arXiv2023

Crosslingual Generalization through Multitask Finetuning

Multitask prompted finetuning (MTF) has been shown to help large language models generalize to new tasks in a zero-shot setting, but so far explorations of MTF have focused on English data and models. We apply MTF to the pretrained multilingual BLOOM and mT5 model families to produce finetuned variants called BLOOMZ and mT0. We find finetuning large multilingual language models on English tasks with English prompts allows for task generalization to non-English languages that appear only in the pretraining corpus. Finetuning on multilingual tasks with English prompts further improves performance on English and non-English tasks leading to various state-of-the-art zero-shot results. We also investigate finetuning on multilingual tasks with prompts that have been machine-translated from English to match the language of each dataset. We find training on these machine-translated prompts leads to better performance on human-written prompts in the respective languages. Surprisingly, we find models are capable of zero-shot generalization to tasks in languages they have never intentionally seen. We conjecture that the models are learning higher-level capabilities that are both task- and language-agnostic. In addition, we introduce xP3, a composite of supervised datasets in 46 languages with English and machine-translated prompts. Our code, datasets and models are freely available at https://github.com/bigscience-workshop/xmtf.

cs.CL↗

arXiv2023

BLOOM+1: Adding Language Support to BLOOM for Zero-Shot Prompting

The BLOOM model is a large publicly available multilingual language model, but its pretraining was limited to 46 languages. To extend the benefits of BLOOM to other languages without incurring prohibitively large costs, it is desirable to adapt BLOOM to new languages not seen during pretraining. In this work, we apply existing language adaptation strategies to BLOOM and benchmark its zero-shot prompting performance on eight new languages in a resource-constrained setting. We find language adaptation to be effective at improving zero-shot performance in new languages. Surprisingly, we find that adapter-based finetuning is more effective than continued pretraining for large models. In addition, we discover that prompting performance is not significantly affected by language specifics, such as the writing system. It is primarily determined by the size of the language adaptation data. We also add new languages to BLOOMZ, which is a multitask finetuned version of BLOOM capable of following task instructions zero-shot. We find including a new language in the multitask fine-tuning mixture to be the most effective method to teach BLOOMZ a new language. We conclude that with sufficient training data language adaptation can generalize well to diverse languages. Our code is available at https://github.com/bigscience-workshop/multilingual-modeling.

cs.CL↗

arXiv2023

Enhancing Few-shot Text-to-SQL Capabilities of Large Language Models: A Study on Prompt Design Strategies

In-context learning (ICL) has emerged as a new approach to various natural language processing tasks, utilizing large language models (LLMs) to make predictions based on context that has been supplemented with a few examples or task-specific instructions. In this paper, we aim to extend this method to question answering tasks that utilize structured knowledge sources, and improve Text-to-SQL systems by exploring various prompt design strategies for employing LLMs. We conduct a systematic investigation into different demonstration selection methods and optimal instruction formats for prompting LLMs in the Text-to-SQL task. Our approach involves leveraging the syntactic structure of an example's SQL query to retrieve demonstrations, and we demonstrate that pursuing both diversity and similarity in demonstration selection leads to enhanced performance. Furthermore, we show that LLMs benefit from database-related knowledge augmentations. Our most effective strategy outperforms the state-of-the-art system by 2.5 points (Execution Accuracy) and the best fine-tuned system by 5.1 points on the Spider dataset. These results highlight the effectiveness of our approach in adapting LLMs to the Text-to-SQL task, and we present an analysis of the factors contributing to the success of our strategy.

cs.CL↗

arXiv2023

HiPool: Modeling Long Documents Using Graph Neural Networks

Encoding long sequences in Natural Language Processing (NLP) is a challenging problem. Though recent pretraining language models achieve satisfying performances in many NLP tasks, they are still restricted by a pre-defined maximum length, making them challenging to be extended to longer sequences. So some recent works utilize hierarchies to model long sequences. However, most of them apply sequential models for upper hierarchies, suffering from long dependency issues. In this paper, we alleviate these issues through a graph-based method. We first chunk the sequence with a fixed length to model the sentence-level information. We then leverage graphs to model intra- and cross-sentence correlations with a new attention mechanism. Additionally, due to limited standard benchmarks for long document classification (LDC), we propose a new challenging benchmark, totaling six datasets with up to 53k samples and 4034 average tokens' length. Evaluation shows our model surpasses competitive baselines by 2.6% in F1 score, and 4.8% on the longest sequence dataset. Our method is shown to outperform hierarchical sequential models with better performance and scalability, especially for longer sequences.

cs.CL↗

arXiv2023

Evaluating GPT-4 and ChatGPT on Japanese Medical Licensing Examinations

As large language models (LLMs) gain popularity among speakers of diverse languages, we believe that it is crucial to benchmark them to better understand model behaviors, failures, and limitations in languages beyond English. In this work, we evaluate LLM APIs (ChatGPT, GPT-3, and GPT-4) on the Japanese national medical licensing examinations from the past five years, including the current year. Our team comprises native Japanese-speaking NLP researchers and a practicing cardiologist based in Japan. Our experiments show that GPT-4 outperforms ChatGPT and GPT-3 and passes all six years of the exams, highlighting LLMs' potential in a language that is typologically distant from English. However, our evaluation also exposes critical limitations of the current LLM APIs. First, LLMs sometimes select prohibited choices that should be strictly avoided in medical practice in Japan, such as suggesting euthanasia. Further, our analysis shows that the API costs are generally higher and the maximum context size is smaller for Japanese because of the way non-Latin scripts are currently tokenized in the pipeline. We release our benchmark as Igaku QA as well as all model outputs and exam metadata. We hope that our results and benchmark will spur progress on more diverse applications of LLMs. Our benchmark is available at https://github.com/jungokasai/IgakuQA.

cs.CL↗

arXiv2023

Binding Language Models in Symbolic Languages

Though end-to-end neural approaches have recently been dominating NLP tasks in both performance and ease-of-use, they lack interpretability and robustness. We propose Binder, a training-free neural-symbolic framework that maps the task input to a program, which (1) allows binding a unified API of language model (LM) functionalities to a programming language (e.g., SQL, Python) to extend its grammar coverage and thus tackle more diverse questions, (2) adopts an LM as both the program parser and the underlying model called by the API during execution, and (3) requires only a few in-context exemplar annotations. Specifically, we employ GPT-3 Codex as the LM. In the parsing stage, with only a few in-context exemplars, Codex is able to identify the part of the task input that cannot be answerable by the original programming language, correctly generate API calls to prompt Codex to solve the unanswerable part, and identify where to place the API calls while being compatible with the original grammar. In the execution stage, Codex can perform versatile functionalities (e.g., commonsense QA, information extraction) given proper prompts in the API calls. Binder achieves state-of-the-art results on WikiTableQuestions and TabFact datasets, with explicit output programs that benefit human debugging. Note that previous best systems are all finetuned on tens of thousands of task-specific samples, while Binder only uses dozens of annotations as in-context exemplars without any training. Our code is available at https://github.com/HKUNLP/Binder .

cs.CL↗

arXiv2023

ProofNet: Autoformalizing and Formally Proving Undergraduate-Level Mathematics

We introduce ProofNet, a benchmark for autoformalization and formal proving of undergraduate-level mathematics. The ProofNet benchmarks consists of 371 examples, each consisting of a formal theorem statement in Lean 3, a natural language theorem statement, and a natural language proof. The problems are primarily drawn from popular undergraduate pure mathematics textbooks and cover topics such as real and complex analysis, linear algebra, abstract algebra, and topology. We intend for ProofNet to be a challenging benchmark that will drive progress in autoformalization and automatic theorem proving. We report baseline results on statement autoformalization via in-context learning. Moreover, we introduce two novel statement autoformalization methods: prompt retrieval and distilled backtranslation.

cs.CL↗

arXiv2023

Learning Math Reasoning from Self-Sampled Correct and Partially-Correct Solutions

Pretrained language models have shown superior performance on many natural language processing tasks, yet they still struggle at multi-step formal reasoning tasks like grade school math problems. One key challenge of finetuning them to solve such math reasoning problems is that many existing datasets only contain one reference solution for each problem, despite the fact that there are often alternative solutions resembling different reasoning paths to the final answer. This way, the finetuned models are biased towards the limited reference solutions, which limits their generalization to unseen examples. To mitigate this issue, we propose to let the model perform sampling during training and learn from both self-sampled fully-correct solutions, which yield the correct answer upon execution, and partially-correct solutions, whose intermediate state matches an intermediate state of a known correct solution. We show that our use of self-sampled correct and partially-correct solutions can benefit learning and help guide the sampling process, leading to more efficient exploration of the solution space. Additionally, we explore various training objectives to support learning from multiple solutions per example and find they greatly affect the performance. Experiments on two math reasoning datasets show the effectiveness of our method compared to learning from a single reference solution with MLE, where we improve PASS@100 from 35.5% to 44.5% for GSM8K, and 27.6% to 36.2% PASS@80 for MathQA. Such improvements are also consistent across different model sizes. Our code is available at https://github.com/microsoft/TraceCodegen.

cs.LG↗

arXiv2023

LoFT: Enhancing Faithfulness and Diversity for Table-to-Text Generation via Logic Form Control

Logical Table-to-Text (LT2T) generation is tasked with generating logically faithful sentences from tables. There currently exists two challenges in the field: 1) Faithfulness: how to generate sentences that are factually correct given the table content; 2) Diversity: how to generate multiple sentences that offer different perspectives on the table. This work proposes LoFT, which utilizes logic forms as fact verifiers and content planners to control LT2T generation. Experimental results on the LogicNLG dataset demonstrate that LoFT is the first model that addresses unfaithfulness and lack of diversity issues simultaneously. Our code is publicly available at https://github.com/Yale-LILY/LoFT.

cs.CL↗

arXiv2023

Molformer: Motif-based Transformer on 3D Heterogeneous Molecular Graphs

Procuring expressive molecular representations underpins AI-driven molecule design and scientific discovery. The research mainly focuses on atom-level homogeneous molecular graphs, ignoring the rich information in subgraphs or motifs. However, it has been widely accepted that substructures play a dominant role in identifying and determining molecular properties. To address such issues, we formulate heterogeneous molecular graphs (HMGs), and introduce a novel architecture to exploit both molecular motifs and 3D geometry. Precisely, we extract functional groups as motifs for small molecules and employ reinforcement learning to adaptively select quaternary amino acids as motif candidates for proteins. Then HMGs are constructed with both atom-level and motif-level nodes. To better accommodate those HMGs, we introduce a variant of Transformer named Molformer, which adopts a heterogeneous self-attention layer to distinguish the interactions between multi-level nodes. Besides, it is also coupled with a multi-scale mechanism to capture fine-grained local patterns with increasing contextual scales. An attentive farthest point sampling algorithm is also proposed to obtain the molecular representations. We validate Molformer across a broad range of domains, including quantum chemistry, physiology, and biophysics. Extensive experiments show that Molformer outperforms or achieves the comparable performance of several state-of-the-art baselines. Our work provides a promising way to utilize informative motifs from the perspective of multi-level graph construction.

q-bio.QM↗

arXiv2022

STRUDEL: Structured Dialogue Summarization for Dialogue Comprehension

Abstractive dialogue summarization has long been viewed as an important standalone task in natural language processing, but no previous work has explored the possibility of whether abstractive dialogue summarization can also be used as a means to boost an NLP system's performance on other important dialogue comprehension tasks. In this paper, we propose a novel type of dialogue summarization task - STRUctured DiaLoguE Summarization - that can help pre-trained language models to better understand dialogues and improve their performance on important dialogue comprehension tasks. We further collect human annotations of STRUDEL summaries over 400 dialogues and introduce a new STRUDEL dialogue comprehension modeling framework that integrates STRUDEL into a graph-neural-network-based dialogue reasoning module over transformer encoder language models to improve their dialogue comprehension abilities. In our empirical experiments on two important downstream dialogue comprehension tasks - dialogue question answering and dialogue response prediction - we show that our STRUDEL dialogue comprehension model can significantly improve the dialogue comprehension performance of transformer encoder language models.

cs.CL↗