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Gaël Varoquaux

Publications and source records attributed to Gaël Varoquaux.

At least 19 recordsLinked to original sources

SurvICL: a Foundation Model for in-context Survival Analysis

Tabular foundation models (TFMs) now outperform gradient-boosted trees in classification and regression. Yet in survival analysis, which predicts when an event occurs from censored data, often on small clinical cohorts, we find that no existing TFM beats the half-century-old Cox model. We address this issue by introducing SurvICL, a TFM that predicts survival curves in-context. SurvICL is pretrained on purely synthetic datasets generated from a novel flexible proportional-odds prior that outperforms other prior types in our ablation study. Unlike most other survival models, SurvICL is trained with a plain quantile regression loss, which is possible because its synthetic pre-training data generator can provide uncensored event times. Additionally, we introduce the largest survival benchmark to date spanning 103 datasets. On the 63 datasets held out from all design decisions, SurvICL outperforms 20 tree-based, deep, and foundation-model baselines without any tuning: it wins 82.9\% of pairwise comparisons in integrated Brier score, against 71.3\% for the runner-up, the Cox model, and is the first model to rank above Cox on small datasets.

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TILE: Bridging LLMs and Table Foundation Models for Tabular Learning with Strings

Real-world tables are often heterogeneous, combining numerical features with free-form string columns. Table foundation models (TFMs) excel on numerical tables but require strings to be encoded numerically, while large language models (LLMs) hold semantic knowledge but are not designed for tabular predictions. Most existing bridges use LLMs as plug-in encoders for cell strings, yet how to extract representations effectively for tabular learning remains underexplored. We show that the interface between LLMs and tables matter as much as the LLM itself. Applied cell-wise, larger LLMs do not give better features. With our interface, the same LLMs improve steadily with size. TILE (Table-Interfaced LLM Embeddings) combines four ingredients: row serialization to provide cross-column context, intermediate-layer extraction to avoid layers specialized for next-token prediction, columnar pooling to remove mean pooling's length bias, and by-pass features to route numbers and categories past the LLM. Paired with TFMs, TILE sets a new state of the art for tables with strings. Across 100 datasets, it beats the strongest baseline on 89% of splits, with gains across 7 LLMs and 10 tabular learners, and ranks first on the 108-dataset STRABLE benchmark.

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MulTaBench: Benchmarking Multimodal Tabular Learning with Text and Image

Tabular Foundation Models have recently established the state of the art in supervised tabular learning, by leveraging pretraining to learn generalizable representations of numerical and categorical structured data. However, they lack native support for unstructured modalities such as text and image, and rely on frozen, pretrained embeddings to process them. On established Multimodal Tabular Learning benchmarks, we show that tuning the embeddings to the task improves performance. Existing benchmarks, however, often focus on the mere co-occurrence of modalities; this leads to high variance across datasets and masks the benefits of task-specific tuning. To address this gap, we introduce MulTaBench, a benchmark of 40 datasets, split equally between image-tabular and text-tabular tasks. We focus on predictive tasks where the modalities provide complementary predictive signal, and where generic embeddings lose critical information, necessitating Target-Aware Representations that are aligned with the task. Our experimental results demonstrate that the gains from target-aware representation tuning generalize across both text and image modalities, several tabular learners, encoder scales, and embedding dimensions. MulTaBench constitutes the largest image-tabular benchmarking effort to date, spanning high-impact domains such as healthcare and e-commerce. It is designed to enable the research of novel architectures which incorporate joint modeling and target-aware representations, paving the way for the development of novel Multimodal Tabular Foundation Models.

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What is the Role of Small Models in the LLM Era: A Survey

Large Language Models (LLMs) have demonstrated remarkable capabilities in various reasoning tasks, which leads to the development of increasingly large models. However, scaling up model sizes results in significantly higher computational costs and energy consumption, which makes these models impractical for academic researchers and businesses with limited resources. At the same time, Small Models (SMs) are frequently used in practical settings, although their significance is currently underestimated. This raises important questions about the role of small models in the era of LLMs, a topic that has received limited attention in prior surveys. In this work, we systematically examine the relationship between LLMs and SMs from two key perspectives: Collaboration and Competition (or Complementarity). We hope this survey provides valuable insights for practitioners, fostering a deeper understanding of the contribution of small models and promoting more efficient use of computational resources.

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TabICLv2: A better, faster, scalable, and open tabular foundation model

Tabular foundation models, such as TabPFNv2 and TabICL, have recently dethroned gradient-boosted trees at the top of predictive benchmarks, demonstrating the value of in-context learning for tabular data. We introduce TabICLv2, a new state-of-the-art foundation model for regression and classification built on three pillars: (1) a novel synthetic data generation engine designed for high pretraining diversity; (2) various architectural innovations, including a new scalable softmax in attention improving generalization to larger datasets without prohibitive long-sequence pretraining; and (3) optimized pretraining protocols, notably replacing AdamW with the Muon optimizer. On the TabArena and TALENT benchmarks, TabICLv2 without any tuning surpasses the performance of the current state of the art, RealTabPFN-2.5 (hyperparameter-tuned, ensembled, and fine-tuned on real data). With only moderate pretraining compute, TabICLv2 generalizes effectively to million-scale datasets under 50 GB GPU memory while being markedly faster than RealTabPFN-2.5. We provide extensive ablation studies to quantify these contributions and foster open research by releasing code for inference, pretraining, and synthetic data generation at https://github.com/soda-inria/tabicl.

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Performance uncertainty in medical image analysis: a large-scale investigation of confidence intervals

Performance uncertainty quantification is essential for reliable validation and eventual clinical translation of medical imaging artificial intelligence (AI). Confidence intervals (CIs) play a central role in this process by indicating how precise a reported performance estimate is. Yet, due to the limited amount of work examining CI behavior in medical imaging, the community remains largely unaware of how many diverse CI methods exist and how they behave in specific settings. The purpose of this study is to close this gap. To this end, we conducted a large-scale empirical analysis across a total of 24 segmentation and classification tasks, using 19 trained models per task group, a broad spectrum of commonly used performance metrics, multiple aggregation strategies, and several widely adopted CI methods. Reliability (coverage) and precision (width) of each CI method were estimated across all settings to characterize their dependence on study characteristics. Our analysis revealed five principal findings: 1) the sample size required for reliable CIs varies from a few dozens to several thousands of cases depending on study parameters; 2) CI behavior is strongly affected by the choice of performance metric; 3) aggregation strategy substantially influences the reliability of CIs, e.g. they require more observations for macro than for micro; 4) the machine learning problem (segmentation versus classification) modulates these effects; 5) different CI methods are not equally reliable and precise depending on the use case. Finally, we derived practical implications of this study in the form of a decision tree which shall prove useful to the community. This paves the way for future consensus guidelines on reporting performance uncertainty.

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Beyond IID: How General Are Tabular Foundation Models, Really?

Foundation models for predictive machine learning on tabular data have recently gained significant traction in academia and industry. Research communities across disciplines are increasingly evaluating tabular foundation models on diverse datasets and tasks. However, these task- and discipline-specific evaluations remain largely inaccessible to model researchers because benchmark software and evaluation protocols are fragmented. As a result, model researchers rely on standard benchmarks, which are mostly defined for tasks where tabular foundation models already excel. The most challenging scenarios are excluded, limiting meaningful progress in the field by focusing on marginal improvements on IID data rather than on broader, more demanding challenges. To overcome this, we introduce BeyondArena, the first unified holistic benchmark for tabular data that supports diverse task types (IID, temporal, grouped), across sample size and feature dimensionality scales, with diverse feature types (with text, with high cardinality) from a broad range of disciplines. To enable unified benchmarking beyond standard benchmarks, we introduce Data Foundry, a Python framework and metadata schema for curating tabular datasets for predictive machine learning. Our results across 11 models and 142 curated datasets show that existing tabular foundation models excel on tiny- to medium-sized IID data, while traditional tree-based and deep learning models still dominate on non-IID, large, and high-dimensional datasets. BeyondArena guides model research for the most demanding challenges in tabular data, enabling progress towards truly foundational tabular models.

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Crossing the Validation Crisis: Cross-Validation Reduces Benchmarking Variance Surprisingly Well

Modern machine learning progresses through empirical work, benchmarking new methods to evaluate relative performance. However, the statistical variability inherent to evaluation - exacerbated by the stochastic nature of many algorithms - often makes performance estimation unreliable due to the limited test samples available, leading to a validation crisis in which genuine advances are difficult to discern. In this work, we show that cross-validation improves markedly confidence when evaluating and comparing learning algorithm performances. We introduce the concept of sample gain, which quantifies the virtual data augmentation achieved by using multiple cross-validation splits to reduce benchmarking variance. Experiments on both synthetic and real-world datasets (histopathologic scans and NLP fine-tuning) demonstrate that multiple splits can substantially improve the reliability and stability of performance estimates, with diminishing returns often setting in later than expected. We also introduce a procedure to dynamically early-stop cross-validation by estimating from the first few folds if subsequent folds will bring large sample gains. Our findings highlight the value of pushing cross-validation on available samples to achieve robust and reliable benchmarking.

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Tailoring Strictly Proper Scoring Rules for Downstream Tasks: An Application to Causal Inference

Probabilistic models are typically trained using task-agnostic objectives like log-loss, which can lead to significant errors in downstream estimation. This disconnect is especially critical in Inverse Probability Weighting (IPW) for causal inference, where propensity score errors near $0$ and $1$ often lead to high bias and variance. We propose a principled framework for deriving task-specific strictly proper scoring rules by matching the local curvature of the downstream error metric. We apply this to the Average Treatment Effect (ATE) estimation, deriving a closed-form loss and its corresponding canonical probability mapping that can be readily integrated with any model like a neural network or a gradient boosting algorithm. Extensive evaluations on causal inference benchmarks demonstrate that our tailored objective consistently outperforms standard likelihood-based and covariate-balancing approaches.

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STRABLE: Benchmarking Tabular Machine Learning with Strings

Benchmarking tabular learning has revealed the benefit of dedicated architectures, pushing the state of the art. But real-world tables often contain string entries, beyond numbers, and these settings have been understudied due to a lack of a solid benchmarking suite. They lead to new research questions: Are dedicated learners needed, with end-to-end modeling of strings and numbers? Or does it suffice to encode strings as numbers, as with a categorical encoding? And if so, do the resulting tables resemble numerical tabular data, calling for the same learners? To enable these studies, we contribute STRABLE, a benchmarking corpus of 108 tables, all real-world learning problems with strings and numbers across diverse application fields. We run the first large-scale empirical study of tabular learning with strings, evaluating 445 pipelines. These pipelines span end-to-end architectures and modular pipelines, where strings are first encoded, then post-processed, and finally passed to a tabular learner. We find that, because most tables in the wild are categorical-dominant, advanced tabular learners paired with simple string embeddings achieve good predictions at low computational cost. On free-text-dominant tables, large LLM encoders become competitive. Their performance also appears sensitive to post-processing, with differences across LLM families. Finally, we show that STRABLE is a good set of tables to study "string tabular" learning as it leads to generalizable pipeline rankings that are close to the oracle rankings. We thus establish STRABLE as a foundation for research on tabular learning with strings, an important yet understudied area.

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Scalable Feature Learning on Huge Knowledge Graphs for Downstream Machine Learning

Many machine learning tasks can benefit from external knowledge. Large knowledge graphs store such knowledge, and embedding methods can be used to distill it into ready-to-use vector representations for downstream applications. For this purpose, current models have however two limitations: they are primarily optimized for link prediction, via local contrastive learning, and their application to the largest graphs requires significant engineering effort due to GPU memory limits. To address these, we introduce SEPAL: a Scalable Embedding Propagation ALgorithm for large knowledge graphs designed to produce high-quality embeddings for downstream tasks at scale. The key idea of SEPAL is to ensure global embedding consistency by optimizing embeddings only on a small core of entities, and then propagating them to the rest of the graph with message passing. We evaluate SEPAL on 7 large-scale knowledge graphs and 46 downstream machine learning tasks. Our results show that SEPAL significantly outperforms previous methods on downstream tasks. In addition, SEPAL scales up its base embedding model, enabling fitting huge knowledge graphs on commodity hardware.

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Query-Level Uncertainty in Large Language Models

It is important for Large Language Models (LLMs) to be aware of the boundary of their knowledge, distinguishing queries they can confidently answer from those that lie beyond their capabilities. Such awareness enables models to perform adaptive inference, such as invoking retrieval-augmented generation (RAG), engaging in slow and deep thinking, or abstaining from answering when appropriate. These mechanisms are key to developing efficient and trustworthy AI. In this work, we propose a method to detect knowledge boundaries via Query-Level Uncertainty, which estimates if a model is capable of answering a given query before generating any tokens, thus avoiding the generation cost. To this end, we propose a novel, training-free method called Internal Confidence, which leverages self-evaluations across layers and tokens to provide a reliable signal of uncertainty. Empirical studies on both factual question answering and mathematical reasoning tasks demonstrate that our Internal Confidence outperforms several baselines in quality of confidence while being computationally cheaper. Furthermore, we demonstrate its benefits in adaptive inference settings, showing that for RAG and model cascading it reduces inference costs while preserving overall performance.

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International AI Safety Report 2026

The International AI Safety Report 2026 synthesises the current scientific evidence on the capabilities, emerging risks, and safety of general-purpose AI systems. The report series was mandated by the nations attending the AI Safety Summit in Bletchley, UK. 29 nations, the UN, the OECD, and the EU each nominated a representative to the report's Expert Advisory Panel. Over 100 AI experts contributed, representing diverse perspectives and disciplines. Led by the Report's Chair, these independent experts collectively had full discretion over the report's content.

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On the calibration of survival models with competing risks

Survival analysis deals with modeling the time until an event occurs, and accurate probability estimates are crucial for decision-making, particularly in the competing-risks setting where multiple events are possible. While recent work has addressed calibration in standard survival analysis, the competing-risks setting remains under-explored as it is harder (the calibration applies to both probabilities across classes and time horizon). We show that existing calibration measures are not suited to the competing-risk setting and that recent models do not give well-behaved probabilities. To address this, we introduce a dedicated framework with two novel calibration measures that are minimized for oracle estimators (i.e., both measures are proper). We also introduce some methods to estimate, test, and correct the calibration. Our recalibration methods yield good probabilities while preserving discrimination.

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International AI Safety Report 2025: Second Key Update: Technical Safeguards and Risk Management

This second update to the 2025 International AI Safety Report assesses new developments in general-purpose AI risk management over the past year. It examines how researchers, public institutions, and AI developers are approaching risk management for general-purpose AI. In recent months, for example, three leading AI developers applied enhanced safeguards to their new models, as their internal pre-deployment testing could not rule out the possibility that these models could be misused to help create biological weapons. Beyond specific precautionary measures, there have been a range of other advances in techniques for making AI models and systems more reliable and resistant to misuse. These include new approaches in adversarial training, data curation, and monitoring systems. In parallel, institutional frameworks that operationalise and formalise these technical capabilities are starting to emerge: the number of companies publishing Frontier AI Safety Frameworks more than doubled in 2025, and governments and international organisations have established a small number of governance frameworks for general-purpose AI, focusing largely on transparency and risk assessment.

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Large Language Models as Search Engines: Societal Challenges

Large Language Models (LLMs) may one day replace search engines as the primary portal to information on the Web. In this article, we investigate the societal challenges that such a change could bring. We focus on the roles of LLM Providers, Content Creators, and End Users, and identify 15 types of challenges. With each, we show current mitigation strategies -- both from the technical perspective and the legal perspective. We also discuss the impact of each challenge and point out future research opportunities.

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International AI Safety Report 2025: First Key Update: Capabilities and Risk Implications

Since the publication of the first International AI Safety Report, AI capabilities have continued to improve across key domains. New training techniques that teach AI systems to reason step-by-step and inference-time enhancements have primarily driven these advances, rather than simply training larger models. As a result, general-purpose AI systems can solve more complex problems in a range of domains, from scientific research to software development. Their performance on benchmarks that measure performance in coding, mathematics, and answering expert-level science questions has continued to improve, though reliability challenges persist, with systems excelling on some tasks while failing completely on others. These capability improvements also have implications for multiple risks, including risks from biological weapons and cyber attacks. Finally, they pose new challenges for monitoring and controllability. This update examines how AI capabilities have improved since the first Report, then focuses on key risk areas where substantial new evidence warrants updated assessments.

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Risk ratio, odds ratio, risk difference... Which causal measure is easier to generalize?

There are many measures to report so-called treatment or causal effects: absolute difference, ratio, odds ratio, number needed to treat, and so on. The choice of a measure, e.g. absolute versus relative, is often debated because it leads to different impressions of the benefit or risk of a treatment. Besides, different causal measures may lead to various treatment effect heterogeneity: some input variables may have an influence on some causal measures and no effect at all on others. In addition some measures -- but not all -- have appealing properties such as collapsibility, matching the intuition of a population summary. In this paper, we first review common causal measures and their pros and cons typically brought forward. Doing so, we clarify the notions of collapsibility and treatment effect heterogeneity, unifying existing definitions. Then, we show that for any causal measures there exists a discriminative model such that the conditional average treatment effect (CATE) captures the treatment effect. However, only the risk difference has its CATE and ATE (average treatment effect) disentangled from the baseline, regardless of the outcome type (continuous or binary). As our primary goal is the generalization of causal measures, we show that different sets of covariates are needed to generalize an effect to a target population depending on (i) the causal measure of interest, and (ii) the identification method chosen, that is generalizing either conditional outcome or local effects.

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