arXiv subjects

Hairong Zheng

Publications and source records attributed to Hairong Zheng.

85 records · Page 5Linked to original sources

arXiv2019

AUNet: Attention-guided dense-upsampling networks for breast mass segmentation in whole mammograms

Mammography is one of the most commonly applied tools for early breast cancer screening. Automatic segmentation of breast masses in mammograms is essential but challenging due to the low signal-to-noise ratio and the wide variety of mass shapes and sizes. Existing methods deal with these challenges mainly by extracting mass-centered image patches manually or automatically. However, manual patch extraction is time-consuming and automatic patch extraction brings errors that could not be compensated in the following segmentation step. In this study, we propose a novel attention-guided dense-upsampling network (AUNet) for accurate breast mass segmentation in whole mammograms directly. In AUNet, we employ an asymmetrical encoder-decoder structure and propose an effective upsampling block, attention-guided dense-upsampling block (AU block). Especially, the AU block is designed to have three merits. Firstly, it compensates the information loss of bilinear upsampling by dense upsampling. Secondly, it designs a more effective method to fuse high- and low-level features. Thirdly, it includes a channel-attention function to highlight rich-information channels. We evaluated the proposed method on two publicly available datasets, CBIS-DDSM and INbreast. Compared to three state-of-the-art fully convolutional networks, AUNet achieved the best performances with an average Dice similarity coefficient of 81.8% for CBIS-DDSM and 79.1% for INbreast.

cs.CV↗

arXiv2019

Learning Cross-Modal Deep Representations for Multi-Modal MR Image Segmentation

Multi-modal magnetic resonance imaging (MRI) is essential in clinics for comprehensive diagnosis and surgical planning. Nevertheless, the segmentation of multi-modal MR images tends to be time-consuming and challenging. Convolutional neural network (CNN)-based multi-modal MR image analysis commonly proceeds with multiple down-sampling streams fused at one or several layers. Although inspiring performance has been achieved, the feature fusion is usually conducted through simple summation or concatenation without optimization. In this work, we propose a supervised image fusion method to selectively fuse the useful information from different modalities and suppress the respective noise signals. Specifically, an attention block is introduced as guidance for the information selection. From the different modalities, one modality that contributes most to the results is selected as the master modality, which supervises the information selection of the other assistant modalities. The effectiveness of the proposed method is confirmed through breast mass segmentation in MR images of two modalities and better segmentation results are achieved compared to the state-of-the-art methods.

eess.IV↗

arXiv2019

DeepcomplexMRI: Exploiting deep residual network for fast parallel MR imaging with complex convolution

This paper proposes a multi-channel image reconstruction method, named DeepcomplexMRI, to accelerate parallel MR imaging with residual complex convolutional neural network. Different from most existing works which rely on the utilization of the coil sensitivities or prior information of predefined transforms, DeepcomplexMRI takes advantage of the availability of a large number of existing multi-channel groudtruth images and uses them as labeled data to train the deep residual convolutional neural network offline. In particular, a complex convolutional network is proposed to take into account the correlation between the real and imaginary parts of MR images. In addition, the k space data consistency is further enforced repeatedly in between layers of the network. The evaluations on in vivo datasets show that the proposed method has the capability to recover the desired multi-channel images. Its comparison with state-of-the-art method also demonstrates that the proposed method can reconstruct the desired MR images more accurately.

eess.IV↗

arXiv2019

CLCI-Net: Cross-Level fusion and Context Inference Networks for Lesion Segmentation of Chronic Stroke

Segmenting stroke lesions from T1-weighted MR images is of great value for large-scale stroke rehabilitation neuroimaging analyses. Nevertheless, there are great challenges with this task, such as large range of stroke lesion scales and the tissue intensity similarity. The famous encoder-decoder convolutional neural network, which although has made great achievements in medical image segmentation areas, may fail to address these challenges due to the insufficient uses of multi-scale features and context information. To address these challenges, this paper proposes a Cross-Level fusion and Context Inference Network (CLCI-Net) for the chronic stroke lesion segmentation from T1-weighted MR images. Specifically, a Cross-Level feature Fusion (CLF) strategy was developed to make full use of different scale features across different levels; Extending Atrous Spatial Pyramid Pooling (ASPP) with CLF, we have enriched multi-scale features to handle the different lesion sizes; In addition, convolutional long short-term memory (ConvLSTM) is employed to infer context information and thus capture fine structures to address the intensity similarity issue. The proposed approach was evaluated on an open-source dataset, the Anatomical Tracings of Lesions After Stroke (ATLAS) with the results showing that our network outperforms five state-of-the-art methods. We make our code and models available at https://github.com/YH0517/CLCI_Net.

eess.IV↗

arXiv2019

T1rho Fractional-order Relaxation of Human Articular Cartilage

T1rho imaging is a promising non-invasive diagnostic tool for early detection of articular cartilage degeneration. A mono-exponential model is normally used to describe the T1rho relaxation process. However, mono-exponentials may not adequately to describe NMR relaxation in complex, heterogeneous, and anisotropic materials, such as articular cartilage. Fractional-order models have been used successfully to describe complex relaxation phenomena in the laboratory frame in cartilage matrix components. In this paper, we develop a time-fractional order (T-FACT) model for T1rho fitting in human articular cartilage. Representative results demonstrate that the proposed method is able to fit the experimental data with smaller root mean squared error than the one from conventional mono-exponential relaxation model in human articular cartilage.

physics.med-ph↗

arXiv2019

Automatic image-domain Moire artifact reduction method in grating-based x-ray interferometry imaging

The aim of this study is to demonstrate the feasibility of removing the image Moire artifacts caused by system inaccuracies in grating-based x-ray interferometry imaging system via convolutional neural network (CNN) technique. Instead of minimizing these inconsistencies between the acquired phase stepping data via certain optimized signal retrieval algorithms, our newly proposed CNN-based method reduces the Moire artifacts in the image-domain via a learned image post-processing procedure. To ease the training data preparations, we propose to synthesize them with numerical natural images and experimentally obtained Moire artifact-only-images. Moreover, a fast signal processing method has also been developed to generate the needed large number of high quality Moire artifact-only images from finite number of acquired experimental phase stepping data. Experimental results show that the CNN method is able to remove Moire artifacts effectively, while maintaining the signal accuracy and image resolution.

physics.med-ph↗

arXiv2019

CRDN: Cascaded Residual Dense Networks for Dynamic MR Imaging with Edge-enhanced Loss Constraint

Dynamic magnetic resonance (MR) imaging has generated great research interest, as it can provide both spatial and temporal information for clinical diagnosis. However, slow imaging speed or long scanning time is still one of the challenges for dynamic MR imaging. Most existing methods reconstruct Dynamic MR images from incomplete k-space data under the guidance of compressed sensing (CS) or low rank theory, which suffer from long iterative reconstruction time. Recently, deep learning has shown great potential in accelerating dynamic MR. Our previous work proposed a dynamic MR imaging method with both k-space and spatial prior knowledge integrated via multi-supervised network training. Nevertheless, there was still a certain degree of smooth in the reconstructed images at high acceleration factors. In this work, we propose cascaded residual dense networks for dynamic MR imaging with edge-enhance loss constraint, dubbed as CRDN. Specifically, the cascaded residual dense networks fully exploit the hierarchical features from all the convolutional layers with both local and global feature fusion. We further utilize the total variation (TV) loss function, which has the edge enhancement properties, for training the networks.

cs.CV↗

arXiv2018

DIMENSION: Dynamic MR Imaging with Both K-space and Spatial Prior Knowledge Obtained via Multi-Supervised Network Training

Dynamic MR image reconstruction from incomplete k-space data has generated great research interest due to its capability in reducing scan time. Nevertheless, the reconstruction problem is still challenging due to its ill-posed nature. Most existing methods either suffer from long iterative reconstruction time or explore limited prior knowledge. This paper proposes a dynamic MR imaging method with both k-space and spatial prior knowledge integrated via multi-supervised network training, dubbed as DIMENSION. Specifically, the DIMENSION architecture consists of a frequential prior network for updating the k-space with its network prediction and a spatial prior network for capturing image structures and details. Furthermore, a multisupervised network training technique is developed to constrain the frequency domain information and reconstruction results at different levels. The comparisons with classical k-t FOCUSS, k-t SLR, L+S and the state-of-the-art CNN-based method on in vivo datasets show our method can achieve improved reconstruction results in shorter time.

cs.CV↗

arXiv2018

Classifying Mammographic Breast Density by Residual Learning

Mammographic breast density, a parameter used to describe the proportion of breast tissue fibrosis, is widely adopted as an evaluation characteristic of the likelihood of breast cancer incidence. In this study, we present a radiomics approach based on residual learning for the classification of mammographic breast densities. Our method possesses several encouraging properties such as being almost fully automatic, possessing big model capacity and flexibility. It can obtain outstanding classification results without the necessity of result compensation using mammographs taken from different views. The proposed method was instantiated with the INbreast dataset and classification accuracies of 92.6% and 96.8% were obtained for the four BI-RADS (Breast Imaging and Reporting Data System) category task and the two BI-RADS category task,respectively. The superior performances achieved compared to the existing state-of-the-art methods along with its encouraging properties indicate that our method has a great potential to be applied as a computer-aided diagnosis tool.

cs.CV↗

arXiv2018

Deconvolution-Based Backproject-Filter (BPF) Computed Tomography Image Reconstruction Method Using Deep Learning Technique

For conventional computed tomography (CT) image reconstruction tasks, the most popular method is the so-called filtered-back-projection (FBP) algorithm. In it, the acquired Radon projections are usually filtered first by a ramp kernel before back-projected to generate CT images. In this work, as a contrary, we realized the idea of image-domain backproject-filter (BPF) CT image reconstruction using the deep learning techniques for the first time. With a properly designed convolutional neural network (CNN), preliminary results demonstrate that it is feasible to reconstruct CT images with maintained high spatial resolution and accurate pixel values from the highly blurred back-projection image, i.e., laminogram. In addition, experimental results also show that this deconvolution-based CT image reconstruction network has the potential to reduce CT image noise (up to 20%), indicating that patient radiation dose may be reduced. Due to these advantages, this proposed CNN-based image-domain BPF type CT image reconstruction scheme provides promising prospects in generating high spatial resolution, low-noise CT images for future clinical applications.

physics.med-ph↗

arXiv2001

Scaling of the magnetoconductivity of silicon MOSFET's: evidence for a quantum phase transition in two dimensions

For a broad range of electron densities $n$ and temperatures $T$, the in-plane magnetoconductivity of the two-dimensional system of electrons in silicon MOSFET's can be scaled onto a universal curve with a single parameter $H_σ(n,T)$, where $H_σ$ obeys the empirical relation $H_σ=A (n) [Δ(n)^2 +T^2]^{1/2}$. The characteristic energy $k_B Δ$ associated with the magnetic field dependence of the conductivity decreases with decreasing density, and extrapolates to 0 at a critical density $n_0$, signaling the approach to a zero-temperature quantum phase transition. We show that $H_σ=AT$ for densities near $n_0$.

cond-mat.str-el↗

arXiv2000

Temperature-Dependence of the Resistivity of a Dilute 2D Electron System in High Parallel Magnetic Field

We report measurements of the resistance of silicon MOSFETs as a function of temperature in high parallel magnetic fields where the 2D system of electrons has been shown to be fully spin-polarized. A magnetic field suppresses the metallic behavior observed in the absence of a magnetic field. In a field of 10.8 T, insulating behavior is found for densities up to n_s approximately 1.35 x 10^{11} cm^{-2} or 1.5 n_c; above this density the resistance is a very weak function of temperature, varying less than 10% between 0.25 K and 1.90 K. At low densities the resistance goes to infinity more rapidly as the temperature is reduced than in zero field and the magnetoresistance diverges as T goes to 0.

cond-mat.str-el↗

arXiv2000

Small Angle Shubnikov-de Haas Measurements in Silicon MOSFET's: the Effect of Strong In-Plane Magnetic Field

Measurements in magnetic fields applied at small angles relative to the electron plane in silicon MOSFETs indicate a factor of two increase of the frequency of Shubnikov-de Haas oscillations at H>H_{sat}. This signals the onset of full spin polarization above H_{sat}, the parallel field above which the resistivity saturates to a constant value. For H<H_{sat}, the phase of the second harmonic of the oscillations relative to the first is consistent with scattering events that depend on the overlap instead of the sum of the spin-up and spin-down densities of states.

cond-mat.str-el↗