arXiv subjects

Hao Chen

Publications and source records attributed to Hao Chen.

At least 793 records · Page 44Linked to original sources

arXiv2024

TAKT: Target-Aware Knowledge Transfer for Whole Slide Image Classification

Transferring knowledge from a source domain to a target domain can be crucial for whole slide image classification, since the number of samples in a dataset is often limited due to high annotation costs. However, domain shift and task discrepancy between datasets can hinder effective knowledge transfer. In this paper, we propose a Target-Aware Knowledge Transfer framework, employing a teacher-student paradigm. Our framework enables the teacher model to learn common knowledge from the source and target domains by actively incorporating unlabelled target images into the training of the teacher model. The teacher bag features are subsequently adapted to supervise the training of the student model on the target domain. Despite incorporating the target features during training, the teacher model tends to overlook them under the inherent domain shift and task discrepancy. To alleviate this, we introduce a target-aware feature alignment module to establish a transferable latent relationship between the source and target features by solving the optimal transport problem. Experimental results show that models employing knowledge transfer outperform those trained from scratch, and our method achieves state-of-the-art performance among other knowledge transfer methods on various datasets, including TCGA-RCC, TCGA-NSCLC, and Camelyon16.

cs.CV↗

arXiv2024

Rethinking Autoencoders for Medical Anomaly Detection from A Theoretical Perspective

Medical anomaly detection aims to identify abnormal findings using only normal training data, playing a crucial role in health screening and recognizing rare diseases. Reconstruction-based methods, particularly those utilizing autoencoders (AEs), are dominant in this field. They work under the assumption that AEs trained on only normal data cannot reconstruct unseen abnormal regions well, thereby enabling the anomaly detection based on reconstruction errors. However, this assumption does not always hold due to the mismatch between the reconstruction training objective and the anomaly detection task objective, rendering these methods theoretically unsound. This study focuses on providing a theoretical foundation for AE-based reconstruction methods in anomaly detection. By leveraging information theory, we elucidate the principles of these methods and reveal that the key to improving AE in anomaly detection lies in minimizing the information entropy of latent vectors. Experiments on four datasets with two image modalities validate the effectiveness of our theory. To the best of our knowledge, this is the first effort to theoretically clarify the principles and design philosophy of AE for anomaly detection. The code is available at \url{https://github.com/caiyu6666/AE4AD}.

cs.LG↗

arXiv2024

FreeCompose: Generic Zero-Shot Image Composition with Diffusion Prior

We offer a novel approach to image composition, which integrates multiple input images into a single, coherent image. Rather than concentrating on specific use cases such as appearance editing (image harmonization) or semantic editing (semantic image composition), we showcase the potential of utilizing the powerful generative prior inherent in large-scale pre-trained diffusion models to accomplish generic image composition applicable to both scenarios. We observe that the pre-trained diffusion models automatically identify simple copy-paste boundary areas as low-density regions during denoising. Building on this insight, we propose to optimize the composed image towards high-density regions guided by the diffusion prior. In addition, we introduce a novel maskguided loss to further enable flexible semantic image composition. Extensive experiments validate the superiority of our approach in achieving generic zero-shot image composition. Additionally, our approach shows promising potential in various tasks, such as object removal and multiconcept customization.

cs.CV↗

arXiv2024

Towards Efficient Pixel Labeling for Industrial Anomaly Detection and Localization

In the realm of practical Anomaly Detection (AD) tasks, manual labeling of anomalous pixels proves to be a costly endeavor. Consequently, many AD methods are crafted as one-class classifiers, tailored for training sets completely devoid of anomalies, ensuring a more cost-effective approach. While some pioneering work has demonstrated heightened AD accuracy by incorporating real anomaly samples in training, this enhancement comes at the price of labor-intensive labeling processes. This paper strikes the balance between AD accuracy and labeling expenses by introducing ADClick, a novel Interactive Image Segmentation (IIS) algorithm. ADClick efficiently generates "ground-truth" anomaly masks for real defective images, leveraging innovative residual features and meticulously crafted language prompts. Notably, ADClick showcases a significantly elevated generalization capacity compared to existing state-of-the-art IIS approaches. Functioning as an anomaly labeling tool, ADClick generates high-quality anomaly labels (AP $= 94.1\%$ on MVTec AD) based on only $3$ to $5$ manual click annotations per training image. Furthermore, we extend the capabilities of ADClick into ADClick-Seg, an enhanced model designed for anomaly detection and localization. By fine-tuning the ADClick-Seg model using the weak labels inferred by ADClick, we establish the state-of-the-art performances in supervised AD tasks (AP $= 86.4\%$ on MVTec AD and AP $= 78.4\%$, PRO $= 98.6\%$ on KSDD2).

cs.CV↗

arXiv2024

DM3D: Distortion-Minimized Weight Pruning for Lossless 3D Object Detection

Applying deep neural networks to 3D point cloud processing has attracted increasing attention due to its advanced performance in many areas, such as AR/VR, autonomous driving, and robotics. However, as neural network models and 3D point clouds expand in size, it becomes a crucial challenge to reduce the computational and memory overhead to meet latency and energy constraints in real-world applications. Although existing approaches have proposed to reduce both computational cost and memory footprint, most of them only address the spatial redundancy in inputs, i.e. removing the redundancy of background points in 3D data. In this paper, we propose a novel post-training weight pruning scheme for 3D object detection that is (1) orthogonal to all existing point cloud sparsifying methods, which determines redundant parameters in the pretrained model that lead to minimal distortion in both locality and confidence (detection distortion); and (2) a universal plug-and-play pruning framework that works with arbitrary 3D detection model. This framework aims to minimize detection distortion of network output to maximally maintain detection precision, by identifying layer-wise sparsity based on second-order Taylor approximation of the distortion. Albeit utilizing second-order information, we introduced a lightweight scheme to efficiently acquire Hessian information, and subsequently perform dynamic programming to solve the layer-wise sparsity. Extensive experiments on KITTI, Nuscenes and ONCE datasets demonstrate that our approach is able to maintain and even boost the detection precision on pruned model under noticeable computation reduction (FLOPs). Noticeably, we achieve over 3.89x, 3.72x FLOPs reduction on CenterPoint and PVRCNN model, respectively, without mAP decrease, significantly improving the state-of-the-art.

cs.CV↗

arXiv2024

Enable the Right to be Forgotten with Federated Client Unlearning in Medical Imaging

The right to be forgotten, as stated in most data regulations, poses an underexplored challenge in federated learning (FL), leading to the development of federated unlearning (FU). However, current FU approaches often face trade-offs between efficiency, model performance, forgetting efficacy, and privacy preservation. In this paper, we delve into the paradigm of Federated Client Unlearning (FCU) to guarantee a client the right to erase the contribution or the influence, introducing the first FU framework in medical imaging. In the unlearning process of a client, the proposed model-contrastive unlearning marks a pioneering step towards feature-level unlearning, and frequency-guided memory preservation ensures smooth forgetting of local knowledge while maintaining the generalizability of the trained global model, thus avoiding performance compromises and guaranteeing rapid post-training. We evaluated our FCU framework on two public medical image datasets, including Intracranial hemorrhage diagnosis and skin lesion diagnosis, demonstrating that our framework outperformed other state-of-the-art FU frameworks, with an expected speed-up of 10-15 times compared with retraining from scratch. The code and the organized datasets can be found at: https://github.com/dzp2095/FCU.

eess.IV↗

arXiv2024

Multimodal Data Integration for Precision Oncology: Challenges and Future Directions

The essence of precision oncology lies in its commitment to tailor targeted treatments and care measures to each patient based on the individual characteristics of the tumor. The inherent heterogeneity of tumors necessitates gathering information from diverse data sources to provide valuable insights from various perspectives, fostering a holistic comprehension of the tumor. Over the past decade, multimodal data integration technology for precision oncology has made significant strides, showcasing remarkable progress in understanding the intricate details within heterogeneous data modalities. These strides have exhibited tremendous potential for improving clinical decision-making and model interpretation, contributing to the advancement of cancer care and treatment. Given the rapid progress that has been achieved, we provide a comprehensive overview of about 300 papers detailing cutting-edge multimodal data integration techniques in precision oncology. In addition, we conclude the primary clinical applications that have reaped significant benefits, including early assessment, diagnosis, prognosis, and biomarker discovery. Finally, derived from the findings of this survey, we present an in-depth analysis that explores the pivotal challenges and reveals essential pathways for future research in the field of multimodal data integration for precision oncology.

q-bio.QM↗

arXiv2024

Singularities on maxfaces constructed by node-opening

The node-opening technique, originally designed for constructing minimal surfaces, is adapted to construct a rich variety of new maxfaces of high genus that are embedded outside a compact set and have arbitrarily many catenoid or planar ends, thus removing the scarcity of examples of maxfaces. The surfaces look like spacelike planes connected by small necks. Among the examples are maxfaces of the Costa--Hoffman--Meeks type. Although very fruitful, the main challenge of this paper is not the construction itself, but the analysis of the positions and natures of singularities on these maxfaces. More specifically, we conclude that the singular set form curves around the waists of the necks. In generic and some symmetric cases, all but finitely many singularities are cuspidal edges, and the non-cuspidal singularities are swallowtails evenly distributed along the singular curves.

math.DG↗

arXiv2024

GeoBench: Benchmarking and Analyzing Monocular Geometry Estimation Models

Recent advances in discriminative and generative pretraining have yielded geometry estimation models with strong generalization capabilities. While discriminative monocular geometry estimation methods rely on large-scale fine-tuning data to achieve zero-shot generalization, several generative-based paradigms show the potential of achieving impressive generalization performance on unseen scenes by leveraging pre-trained diffusion models and fine-tuning on even a small scale of synthetic training data. Frustratingly, these models are trained with different recipes on different datasets, making it hard to find out the critical factors that determine the evaluation performance. Besides, current geometry evaluation benchmarks have two main drawbacks that may prevent the development of the field, i.e., limited scene diversity and unfavorable label quality. To resolve the above issues, (1) we build fair and strong baselines in a unified codebase for evaluating and analyzing the geometry estimation models; (2) we evaluate monocular geometry estimators on more challenging benchmarks for geometry estimation task with diverse scenes and high-quality annotations. Our results reveal that pre-trained using large data, discriminative models such as DINOv2, can outperform generative counterparts with a small amount of high-quality synthetic data under the same training configuration, which suggests that fine-tuning data quality is a more important factor than the data scale and model architecture. Our observation also raises a question: if simply fine-tuning a general vision model such as DINOv2 using a small amount of synthetic depth data produces SOTA results, do we really need complex generative models for depth estimation? We believe this work can propel advancements in geometry estimation tasks as well as a wide range of downstream applications.

cs.CV↗

arXiv2024

Multi-Behavior Collaborative Filtering with Partial Order Graph Convolutional Networks

Representing information of multiple behaviors in the single graph collaborative filtering (CF) vector has been a long-standing challenge. This is because different behaviors naturally form separate behavior graphs and learn separate CF embeddings. Existing models merge the separate embeddings by appointing the CF embeddings for some behaviors as the primary embedding and utilizing other auxiliaries to enhance the primary embedding. However, this approach often results in the joint embedding performing well on the main tasks but poorly on the auxiliary ones. To address the problem arising from the separate behavior graphs, we propose the concept of Partial Order Recommendation Graphs (POG). POG defines the partial order relation of multiple behaviors and models behavior combinations as weighted edges to merge separate behavior graphs into a joint POG. Theoretical proof verifies that POG can be generalized to any given set of multiple behaviors. Based on POG, we propose the tailored Partial Order Graph Convolutional Networks (POGCN) that convolute neighbors' information while considering the behavior relations between users and items. POGCN also introduces a partial-order BPR sampling strategy for efficient and effective multiple-behavior CF training. POGCN has been successfully deployed on the homepage of Alibaba for two months, providing recommendation services for over one billion users. Extensive offline experiments conducted on three public benchmark datasets demonstrate that POGCN outperforms state-of-the-art multi-behavior baselines across all types of behaviors. Furthermore, online A/B tests confirm the superiority of POGCN in billion-scale recommender systems.

cs.IR↗

arXiv2024

Overview of the CAIL 2023 Argument Mining Track

We give a detailed overview of the CAIL 2023 Argument Mining Track, one of the Chinese AI and Law Challenge (CAIL) 2023 tracks. The main goal of the track is to identify and extract interacting argument pairs in trial dialogs. It mainly uses summarized judgment documents but can also refer to trial recordings. The track consists of two stages, and we introduce the tasks designed for each stage; we also extend the data from previous events into a new dataset -- CAIL2023-ArgMine -- with annotated new cases from various causes of action. We outline several submissions that achieve the best results, including their methods for different stages. While all submissions rely on language models, they have incorporated strategies that may benefit future work in this field.

cs.CL↗

arXiv2024

HistGen: Histopathology Report Generation via Local-Global Feature Encoding and Cross-modal Context Interaction

Histopathology serves as the gold standard in cancer diagnosis, with clinical reports being vital in interpreting and understanding this process, guiding cancer treatment and patient care. The automation of histopathology report generation with deep learning stands to significantly enhance clinical efficiency and lessen the labor-intensive, time-consuming burden on pathologists in report writing. In pursuit of this advancement, we introduce HistGen, a multiple instance learning-empowered framework for histopathology report generation together with the first benchmark dataset for evaluation. Inspired by diagnostic and report-writing workflows, HistGen features two delicately designed modules, aiming to boost report generation by aligning whole slide images (WSIs) and diagnostic reports from local and global granularity. To achieve this, a local-global hierarchical encoder is developed for efficient visual feature aggregation from a region-to-slide perspective. Meanwhile, a cross-modal context module is proposed to explicitly facilitate alignment and interaction between distinct modalities, effectively bridging the gap between the extensive visual sequences of WSIs and corresponding highly summarized reports. Experimental results on WSI report generation show the proposed model outperforms state-of-the-art (SOTA) models by a large margin. Moreover, the results of fine-tuning our model on cancer subtyping and survival analysis tasks further demonstrate superior performance compared to SOTA methods, showcasing strong transfer learning capability. Dataset, model weights, and source code are available in https://github.com/dddavid4real/HistGen.

cs.CV↗

arXiv2024

PyGWalker: On-the-fly Assistant for Exploratory Visual Data Analysis

Exploratory visual data analysis tools empower data analysts to efficiently and intuitively explore data insights throughout the entire analysis cycle. However, the gap between common programmatic analysis (e.g., within computational notebooks) and exploratory visual analysis leads to a disjointed and inefficient data analysis experience. To bridge this gap, we developed PyGWalker, a Python library that offers on-the-fly assistance for exploratory visual data analysis. It features a lightweight and intuitive GUI with a shelf builder modality. Its loosely coupled architecture supports multiple computational environments to accommodate varying data sizes. Since its release in February 2023, PyGWalker has gained much attention, with 612k downloads on PyPI and over 10.5k stars on GitHub as of June 2024. This demonstrates its value to the data science and visualization community, with researchers and developers integrating it into their own applications and studies.

cs.HC↗

arXiv2024

MoME: Mixture of Multimodal Experts for Cancer Survival Prediction

Survival analysis, as a challenging task, requires integrating Whole Slide Images (WSIs) and genomic data for comprehensive decision-making. There are two main challenges in this task: significant heterogeneity and complex inter- and intra-modal interactions between the two modalities. Previous approaches utilize co-attention methods, which fuse features from both modalities only once after separate encoding. However, these approaches are insufficient for modeling the complex task due to the heterogeneous nature between the modalities. To address these issues, we propose a Biased Progressive Encoding (BPE) paradigm, performing encoding and fusion simultaneously. This paradigm uses one modality as a reference when encoding the other. It enables deep fusion of the modalities through multiple alternating iterations, progressively reducing the cross-modal disparities and facilitating complementary interactions. Besides modality heterogeneity, survival analysis involves various biomarkers from WSIs, genomics, and their combinations. The critical biomarkers may exist in different modalities under individual variations, necessitating flexible adaptation of the models to specific scenarios. Therefore, we further propose a Mixture of Multimodal Experts (MoME) layer to dynamically selects tailored experts in each stage of the BPE paradigm. Experts incorporate reference information from another modality to varying degrees, enabling a balanced or biased focus on different modalities during the encoding process. Extensive experimental results demonstrate the superior performance of our method on various datasets, including TCGA-BLCA, TCGA-UCEC and TCGA-LUAD. Codes are available at https://github.com/BearCleverProud/MoME.

eess.IV↗

arXiv2024

Linear Codes from Projective Linear Anticodes Revisited

An anticode ${\bf C} \subset {\bf F}_q^n$ with the diameter $δ$ is a code in ${\bf F}_q^n$ such that the distance between any two distinct codewords in ${\bf C}$ is at most $δ$. The famous Erdös-Kleitman bound for a binary anticode ${\bf C}$ of the length $n$ and the diameter $δ$ asserts that $$|{\bf C}| \leq Σ_{i=0}^{\fracδ{2}} \displaystyle{n \choose i}.$$ In this paper, we give an antiGriesmer bound for $q$-ary projective linear anticodes, which is stronger than the above Erdös-Kleitman bound for binary anticodes. The antiGriesmer bound is a lower bound on diameters of projective linear anticodes. From some known projective linear anticodes, we construct some linear codes with optimal or near optimal minimum distances. A complementary theorem constructing infinitely many new projective linear $(t+1)$-weight code from a known $t$-weight linear code is presented. Then many new optimal or almost optimal few-weight linear codes are given and their weight distributions are determined. As a by-product, we also construct several infinite families of three-weight binary linear codes, which lead to $l$-strongly regular graphs for each odd integer $l \geq 3$.

cs.IT↗

arXiv2024

CompeteAI: Understanding the Competition Dynamics in Large Language Model-based Agents

Large language models (LLMs) have been widely used as agents to complete different tasks, such as personal assistance or event planning. While most of the work has focused on cooperation and collaboration between agents, little work explores competition, another important mechanism that promotes the development of society and economy. In this paper, we seek to examine the competition dynamics in LLM-based agents. We first propose a general framework for studying the competition between agents. Then, we implement a practical competitive environment using GPT-4 to simulate a virtual town with two types of agents, restaurant agents and customer agents. Specifically, the restaurant agents compete with each other to attract more customers, where competition encourages them to transform, such as cultivating new operating strategies. Simulation experiments reveal several interesting findings at the micro and macro levels, which align well with existing market and sociological theories. We hope that the framework and environment can be a promising testbed to study competition that fosters understanding of society. Code is available at: https://github.com/microsoft/competeai.

cs.AI↗

arXiv2024

Knowledge-to-SQL: Enhancing SQL Generation with Data Expert LLM

Generating accurate SQL queries for user questions (text-to-SQL) has been a long-standing challenge since it requires a deep understanding of both the user's question and the corresponding database schema in order to retrieve the desired content accurately. Existing methods rely on the comprehensive capability of large language models (LLMs) to generate the SQL. However, some necessary knowledge is not explicitly included in the database schema and user question or has been learned by LLMs. Thus, the generated SQL of the knowledge-insufficient questions may be inaccurate, negatively influencing the text-to-SQL models' performance and robustness. To address this challenge, we propose the Knowledge-to-SQL framework, which employs tailored Data Expert LLM (DELLM) to provide helpful knowledge for all text-to-SQL models. Specifically, we introduce the detailed implementation of DELLM regarding table reading and the basic fine-tuning process. We further propose a Preference Learning via Database Feedback (PLDBF) strategy, refining the DELLM to generate more helpful knowledge for LLMs. Extensive experiments verify that DELLM can enhance the state-of-the-art approaches for text-to-SQL tasks. The corresponding code of DELLM is released for further research.

cs.CL↗

arXiv2024

A General Framework for Learning from Weak Supervision

Weakly supervised learning generally faces challenges in applicability to various scenarios with diverse weak supervision and in scalability due to the complexity of existing algorithms, thereby hindering the practical deployment. This paper introduces a general framework for learning from weak supervision (GLWS) with a novel algorithm. Central to GLWS is an Expectation-Maximization (EM) formulation, adeptly accommodating various weak supervision sources, including instance partial labels, aggregate statistics, pairwise observations, and unlabeled data. We further present an advanced algorithm that significantly simplifies the EM computational demands using a Non-deterministic Finite Automaton (NFA) along with a forward-backward algorithm, which effectively reduces time complexity from quadratic or factorial often required in existing solutions to linear scale. The problem of learning from arbitrary weak supervision is therefore converted to the NFA modeling of them. GLWS not only enhances the scalability of machine learning models but also demonstrates superior performance and versatility across 11 weak supervision scenarios. We hope our work paves the way for further advancements and practical deployment in this field.

cs.LG↗