arXiv subjects

Ilsa R. Cooke

Publications and source records attributed to Ilsa R. Cooke.

At least 19 recordsLinked to original sources

arXiv2026

Infrared Spectroscopy and Photochemistry of Aromatic Nitriles in Para-Hydrogen Matrices

Motivated by recent detections of several aromatic nitriles in Taurus Molecular Cloud-1, we report laboratory and theoretical investigations of the vibrational spectroscopy and photochemistry of singly and doubly cyano-substituted benzene in solid para-hydrogen matrices. We compare the photochemistry of cyanobenzene (benzonitrile) and three dicyanobenzene isomers initiated by excitations at 193 nm. In addition, we report the photochemistry of deuterated cyanobenzene (d$_5$-cyanobenzene), enabling us to determine the major products produced during the cyanobenzene photodissociation. The major products observed in the photolysis of all the nitriles are HCN and HNC, which are likely produced by hydrogen abstraction from para-H$_2$ by the CN radical. This indicates that the major photodissociation channel involves cleavage of the bond between the ring and the nitrile group, forming the phenyl (or cyanophenyl) radical + CN. We observe secondary photoproducts similar to those found during benzene photolysis. Our findings may aid the interpretation of recent JWST mid-infrared observations of aromatics in photodissociation regions.

astro-ph.SR↗

arXiv2026

Exploring the Limits of Spectral Line Stacking in Spectral Line Data and Application Toward the Detection of Bulk $^{13}$C Enrichment of Aromatics in TMC-1

The formation history of polycyclic aromatic hydrocarbons (PAHs) in the interstellar medium remains a topic of active debate, with proposed mechanisms ranging from high-temperature stellar ejecta processes to low-temperature chemistry within molecular clouds. Recently, the identification of small PAHs in the cold, dark cloud TMC-1 has provided some circumstantial evidence of the latter. If these are formed in situ, their isotopic ratios, particularly $^{12}$C/$^{13}$C, should reflect the local, bulk material of the molecular cloud; in contrast, PAHs formed in the circumstellar envelopes of evolved stars may show enhanced $^{13}$C abundances. The expected radio signals of these $^{13}$C substituted species will be faint, and thus we conducted a detailed proof-of-concept analysis examining whether spectral line stacking and matched filtering techniques can robustly retrieve signal from multiple singly substituted $^{13}$C isotopologues in aggregate. We find that while retrieved signal decreases in the limit of spectral line confusion, false-positive detections are exceedingly improbable at the adopted 5$σ$ matched filter response detection threshold. We then demonstrate the technique on actual observational data of isotopologues of HC$_9$N toward TMC-1. Finally, we show using synthetic data that if laboratory rotational spectra of all singly substituted $^{13}$C isotopologues of cyanonaphthalene and cyanopyrene isomers existed, current observations of TMC-1 would be sensitive enough to discriminate between a local, bulk $^{12}$C/$^{13}$C ratio and one with an enhanced $^{13}$C abundance suggestive of inheritance.

astro-ph.GA↗

arXiv2026

Detection of the Polycyclic Aromatic Hydrocarbon Phenalene (C$_{13}$H$_{10}$) in the Very Low Luminosity Object (VeLLO) MC27/L1521F

To date, 14 polycyclic aromatic hydrocarbons (PAHs) ranging in size from two to seven (including five- and six-membered) carbon rings have been detected in the starless dense core TMC-1 CP within the Taurus molecular cloud. Their detection raises questions about the distribution of PAHs in the cold interstellar medium (ISM) and their evolution during star formation. Here, we present the first interstellar detection of a three-ring PAH outside of TMC-1 CP. We detect phenalene (C$_{13}$H$_{10}$), a compact, peri-fused PAH, in the dense core MC27/L1521F, a molecular cloud in Taurus containing a very low-luminosity object (VeLLO). We compare the abundances of phenalene in the two sources with respect to the single-ring aromatic benzonitrile, and find that it is enhanced by a factor of four in MC27/L1521F. We discuss the implications for possible formation and destruction pathways in the two sources. These findings further support the widespread abundance of PAHs throughout the cold ISM and are consistent with survival, inheritance, or replenishment during the earliest stages of star formation.

astro-ph.GA↗

arXiv2026

The impact of hydrogen atom tunneling on aromatic chemistry in TMC-1

Hydrogen atom tunneling likely plays a substantial role in the gas-phase chemistry of astrochemical environments. To determine the potential effect that it has on the chemical modeling of aromatic molecules, we screened the kida.uva.2024 network, and our own expanded network to find reactions which could be significantly accelerated by hydrogen atom tunneling in the ISM. In total, 64 reactions were identified. The hydrogen abstraction reactions from H$_{2}$ to four key interstellar radicals (C$_{2}$H, OH, CN, and NH$_{2}$) were studied further using newly calculated potential energy surfaces and RRKM analyses to determine rate coefficients for a temperature of 10 K and a density of 2 $\times$ 10$^{4}$ cm$^{-3}$. Despite having low rate coefficients of 1.66 $\times$ 10$^{-15}$, 8.17 $\times$ 10$^{-16}$ and 3.15 $\times$ 10$^{-16}$ $\mathrm{cm^{3}\,s^{-1}}$ the C$_{2}$H, OH, and CN reactions are competitive in the ISM, due to large overall rates caused by the high abundance of molecular hydrogen. The calculated value for the NH$_{2}$ reaction, however, was much smaller and found to be inefficient at ISM conditions. The possible effects of all other considered reactions were studied with simulations using calculated collision limit rate coefficients. Upper and lower bounds were then placed on modeled aromatic abundances using the most significant reactions. Due to the dependence of calculated aromatic abundances on reactions involving c-C$_{6}$H$_{5}^{+}$ and the recent questions surrounding its reactivity, we also explored the abundance variations caused by reactions leading to or involving c-C$_{6}$H$_{5}^{+}$.

astro-ph.GA↗

arXiv2025

The Molecular Inventory of TMC-1 with GOTHAM Observations

Spectral line surveys of the Taurus Molecular Cloud-1 (TMC-1) have led to the detection of more than 100 new molecular species, making it the most prolific source of interstellar molecular discoveries. These wide-band, high-sensitivity line surveys have been enabled by advances in telescope and receiver technology, particularly at centimeter and millimeter wavelengths. In this work, we present a statistical analysis of the molecular inventory of TMC-1 as probed by the GOTHAM large program survey from 3.9 to 36.4 GHz. To fully unlock the potential of the $\sim$29 GHz spectral bandwidth, we developed an automated pipeline for data reduction and calibration. We applied a Bayesian approach with Markov-Chain Monte Carlo fitting to the calibrated spectra and constrained column densities for 102 molecular species detected in TMC-1, including 75 main isotopic species, 20 carbon-13 substituted species, and seven deuterium-substituted species. This list of the detected gas-phase molecules is populated by unsaturated hydrocarbons, in stark contrast to the oxygen-rich organics found in sublimated ices around protostars. Of note, ten individual aromatic molecules were identified in the GOTHAM observations, contributing 0.011% of the gas-phase carbon budget probed by detected molecules when including CO and 6% when excluding CO. This work provides a reference set of observed gas-phase molecular abundances for interstellar clouds, offering a new benchmark for astrochemical theoretical models.

astro-ph.GA↗

arXiv2025

Discovery of the 7-ring PAH Cyanocoronene (C$_{24}$H$_{11}$CN) in GOTHAM Observations of TMC-1

We present the synthesis and laboratory rotational spectroscopy of the 7-ring polycyclic aromatic hydrocarbon (PAH) cyanocoronene (C$_{24}$H$_{11}$CN) using a laser-ablation assisted cavity-enhanced Fourier transform microwave spectrometer. A total of 71 transitions were measured and assigned between 6.8--10.6\,GHz. Using these assignments, we searched for emission from cyanocoronene in the GBT Observations of TMC-1: Hunting Aromatic Molecules (GOTHAM) project observations of the cold dark molecular cloud TMC-1 using the 100\,m Green Bank Telescope (GBT). We detect a number of individually resolved transitions in ultrasensitive X-band observations and perform a Markov Chain Monte Carlo analysis to derive best-fit parameters, including a total column density of $N(\mathrm{C}_{24}\mathrm{H}_{11}\mathrm{CN}) = 2.69^{+0.26}_{-0.23} \times 10^{12}\,\mathrm{cm}^{-2}$ at a temperature of $6.05^{+0.38}_{-0.37}\,$K. A spectral stacking and matched filtering analysis provides a robust 17.3$\,σ$ significance to the overall detection. The derived column density is comparable to that of cyano-substituted naphthalene, acenaphthylene, and pyrene, defying the trend of decreasing abundance with increasing molecular size and complexity found for carbon chains. We discuss the implications of the detection for our understanding of interstellar PAH chemistry and highlight major open questions and next steps.

astro-ph.GA↗

arXiv2025

The Missing Link of Sulfur Chemistry in TMC-1: The Detection of c-C3H2S from the GOTHAM Survey

We present the spectroscopic characterization of cyclopropenethione (c-C3H2S) in the laboratory and detect it in space using the Green Bank Telescope (GBT) Observations of TMC-1: Hunting Aromatic Molecules (GOTHAM) survey. The detection of this molecule - the missing link in understanding the C3H2S isomeric family in TMC-1 - completes the detection of all 3 low-energy isomers of C3H2S as both CH2CCS and HCCCHS have been previously detected in this source. The total column density of this molecule (N_T of 5.72+2.65/-1.61x10^10 cm^-2 at an excitation temperature of 4.7+1.3/-1.1 K) is smaller than both CH2CCS and HCCCHS and follows nicely the relative dipole principle (RDP), a kinetic rule-of-thumb for predicting isomer abundances which suggests that, all other chemistry among a family of isomers being the same, the member with the smallest dipole should be the most abundant. The RDP now holds for the astronomical abundance ratios of both the S-bearing and O-bearing counterparts observed in TMC-1; however, CH2CCO continues to elude detection in any astronomical source.

astro-ph.GA↗

arXiv2024

Discovery of interstellar 1-cyanopyrene: a four-ring polycyclic aromatic hydrocarbon in TMC-1

Polycyclic aromatic hydrocarbons (PAHs) are expected to be the most abundant class of organic molecules in space. Their interstellar lifecycle is not well understood, and progress is hampered by difficulties detecting individual PAH molecules. Here, we present the discovery of CN-functionalized pyrene, a 4-ring PAH, in the dense cloud TMC-1 using the 100-m Green Bank Telescope. We derive an abundance of 1-cyanopyrene of ~1.52 x $10^{12}$ cm$^{-2}$, and from this estimate that the un-substituted pyrene accounts for up to ~0.03-0.3% of the carbon budget in the dense interstellar medium which trace the birth sites of stars and planets. The presence of pyrene in this cold (~10 K) molecular cloud agrees with its recent measurement in asteroid Ryugu where isotopic clumping suggest a cold, interstellar origin. The direct link to the birth site of our solar system is strengthened when we consider the solid state pyrene content in the pre-stellar materials compared to comets, which represent the most pristine material in the solar system. We estimate that solid state pyrene can account for 1% of the carbon within comets carried by this one single organic molecule. The abundance indicates pyrene is an "island of stability" in interstellar PAH chemistry and suggests a potential cold molecular cloud origin of the carbon carried by PAHs that is supplied to forming planetary systems, including habitable worlds such as our own.

astro-ph.GA↗

arXiv2024

Detections of interstellar 2-cyanopyrene and 4-cyanopyrene in TMC-1

Polycyclic aromatic hydrocarbons (PAHs) are among the most ubiquitous compounds in the universe, accounting for up to ~25% of all interstellar carbon. Since most unsubstituted PAHs do not possess permanent dipole moments, they are invisible to radio astronomy. Constraining their abundances relies on the detection of polar chemical proxies, such as aromatic nitriles. We report the detection of 2- and 4-cyanopyrene, isomers of the recently detected 1-cyanopyrene. We find that these isomers are present in an abundance ratio of ~2:1:2, which mirrors the number of equivalent sites available for CN addition. We conclude that there is evidence that the cyanopyrene isomers formed by direct CN addition to pyrene under kinetic control in hydrogen-rich gas at 10 K and discuss constraints on the H/CN ratio for PAHs in TMC-1.

astro-ph.GA↗

arXiv2024

High Spectral Resolution Observations of Propynal (HCCCHO) towards TMC-1 from the GOTHAM Large Program on the Green Bank Telescope

We used new high spectral resolution observations of propynal (HCCCHO) towards TMC-1 and in the laboratory to update the spectral line catalog available for transitions of HCCCHO - specifically at frequencies lower than 30 GHz which were previously discrepant in a publicly available catalog. The observed astronomical frequencies provided high enough spectral resolution that, when combined with high-resolution (~2 kHz) measurements taken in the laboratory, a new, consistent fit to both the laboratory and astronomical data was achieved. Now with a nearly exact (<1 kHz) frequency match to the J=2-1 and 3-2 transitions in the astronomical data, using a Markov chain Monte Carlo (MCMC) analysis, a best fit to the total HCCCHO column density of 7.28+4.08/-1.94 x 10^12 cm^-2 was found with a surprisingly low excitation temperature of just over 3 K. This column density is around a factor of 5 times larger than reported in previous studies. Finally, this work highlights that care is needed when using publicly available spectral catalogs to characterize astronomical spectra. The availability of these catalogs is essential to the success of modern astronomical facilities and will only become more important as the next generation of facilities come online.

astro-ph.GA↗

arXiv2024

On the origin of infrared bands attributed to tryptophan in Spitzer observations of IC 348

Infrared emission features toward interstellar gas of the IC 348 star cluster in Perseus have been recently proposed to originate from the amino acid tryptophan. The assignment was based on laboratory infrared spectra of tryptophan pressed into pellets, a method which is known to cause large frequency shifts compared to the gas phase. We assess the validity of the assignment based on the original Spitzer data as well as new data from JWST. In addition, we report new spectra of tryptophan condensed in para-hydrogen matrices to compare with the observed spectra. The JWST MIRI data do not show evidence for tryptophan, despite deeper integration toward IC 348. In addition, we show that several of the lines attributed to tryptophan are likely due to instrumental artifacts. This, combined with the new laboratory data, allows us to conclude that there is no compelling evidence for the tryptophan assignment.

astro-ph.GA↗

arXiv2024

PDRs4All VIII: Mid-IR emission line inventory of the Orion Bar

Mid-infrared emission features probe the properties of ionized gas, and hot or warm molecular gas. The Orion Bar is a frequently studied photodissociation region (PDR) containing large amounts of gas under these conditions, and was observed with the MIRI IFU aboard JWST as part of the "PDRs4All" program. The resulting IR spectroscopic images of high angular resolution (0.2") reveal a rich observational inventory of mid-IR emission lines, and spatially resolve the substructure of the PDR, with a mosaic cutting perpendicularly across the ionization front and three dissociation fronts. We extracted five spectra that represent the ionized, atomic, and molecular gas layers, and measured the most prominent gas emission lines. An initial analysis summarizes the physical conditions of the gas and the potential of these data. We identified around 100 lines, report an additional 18 lines that remain unidentified, and measured the line intensities and central wavelengths. The H I recombination lines originating from the ionized gas layer bordering the PDR, have intensity ratios that are well matched by emissivity coefficients from H recombination theory, but deviate up to 10% due contamination by He I lines. We report the observed emission lines of various ionization stages of Ne, P, S, Cl, Ar, Fe, and Ni, and show how certain line ratios vary between the five regions. We observe the pure-rotational H$_2$ lines in the vibrational ground state from 0-0 S(1) to 0-0 S(8), and in the first vibrationally excited state from 1-1 S(5) to 1-1 S(9). We derive H$_2$ excitation diagrams, and approximate the excitation with one thermal (~700 K) component representative of an average gas temperature, and one non-thermal component (~2700 K) probing the effect of UV pumping. We compare these results to an existing model for the Orion Bar PDR and highlight the differences with the observations.

astro-ph.GA↗

arXiv2024

A far-ultraviolet-driven photoevaporation flow observed in a protoplanetary disk

Most low-mass stars form in stellar clusters that also contain massive stars, which are sources of far-ultraviolet (FUV) radiation. Theoretical models predict that this FUV radiation produces photo-dissociation regions (PDRs) on the surfaces of protoplanetary disks around low-mass stars, impacting planet formation within the disks. We report JWST and Atacama Large Millimetere Array observations of a FUV-irradiated protoplanetary disk in the Orion Nebula. Emission lines are detected from the PDR; modelling their kinematics and excitation allows us to constrain the physical conditions within the gas. We quantify the mass-loss rate induced by the FUV irradiation, finding it is sufficient to remove gas from the disk in less than a million years. This is rapid enough to affect giant planet formation in the disk.

astro-ph.GA↗

arXiv2023

PDRs4All III: JWST's NIR spectroscopic view of the Orion Bar

(Abridged) We investigate the impact of radiative feedback from massive stars on their natal cloud and focus on the transition from the HII region to the atomic PDR (crossing the ionisation front (IF)), and the subsequent transition to the molecular PDR (crossing the dissociation front (DF)). We use high-resolution near-IR integral field spectroscopic data from NIRSpec on JWST to observe the Orion Bar PDR as part of the PDRs4All JWST Early Release Science Program. The NIRSpec data reveal a forest of lines including, but not limited to, HeI, HI, and CI recombination lines, ionic lines, OI and NI fluorescence lines, Aromatic Infrared Bands (AIBs including aromatic CH, aliphatic CH, and their CD counterparts), CO2 ice, pure rotational and ro-vibrational lines from H2, and ro-vibrational lines HD, CO, and CH+, most of them detected for the first time towards a PDR. Their spatial distribution resolves the H and He ionisation structure in the Huygens region, gives insight into the geometry of the Bar, and confirms the large-scale stratification of PDRs. We observe numerous smaller scale structures whose typical size decreases with distance from Ori C and IR lines from CI, if solely arising from radiative recombination and cascade, reveal very high gas temperatures consistent with the hot irradiated surface of small-scale dense clumps deep inside the PDR. The H2 lines reveal multiple, prominent filaments which exhibit different characteristics. This leaves the impression of a "terraced" transition from the predominantly atomic surface region to the CO-rich molecular zone deeper in. This study showcases the discovery space created by JWST to further our understanding of the impact radiation from young stars has on their natal molecular cloud and proto-planetary disk, which touches on star- and planet formation as well as galaxy evolution.

astro-ph.GA↗

arXiv2023

Astrochemical Modeling of Propargyl Radical Chemistry in TMC-1

Recent detections of aromatic species in dark molecular clouds suggest formation pathways may be efficient at very low temperatures and pressures, yet current astrochemical models are unable to account for their derived abundances, which can often deviate from model predictions by several orders of magnitude. The propargyl radical, a highly abundant species in the dark molecular cloud TMC- 1, is an important aromatic precursor in combustion flames and possibly interstellar environments. We performed astrochemical modeling of TMC-1 using the three-phase gas-grain code NAUTILUS and an updated chemical network, focused on refining the chemistry of the propargyl radical and related species. The abundance of the propargyl radical has been increased by half an order of magnitude compared to the previous GOTHAM network. This brings it closer in line with observations, but it remains underestimated by two orders of magnitude compared to its observed value. Predicted abundances for the chemically related C4H3N isomers within an order of magnitude of observed values corroborate the high efficiency of CN addition to closed-shell hydrocarbons under dark molecular cloud conditions. The results of our modeling provide insight into the chemical processes of the propargyl radical in dark molecular clouds and highlight the importance of resonance-stabilized radicals in PAH formation.

astro-ph.GA↗

arXiv2023

PDRs4All IV. An embarrassment of riches: Aromatic infrared bands in the Orion Bar

(Abridged) Mid-infrared observations of photodissociation regions (PDRs) are dominated by strong emission features called aromatic infrared bands (AIBs). The most prominent AIBs are found at 3.3, 6.2, 7.7, 8.6, and 11.2 $μ$m. The most sensitive, highest-resolution infrared spectral imaging data ever taken of the prototypical PDR, the Orion Bar, have been captured by JWST. We provide an inventory of the AIBs found in the Orion Bar, along with mid-IR template spectra from five distinct regions in the Bar: the molecular PDR, the atomic PDR, and the HII region. We use JWST NIRSpec IFU and MIRI MRS observations of the Orion Bar from the JWST Early Release Science Program, PDRs4All (ID: 1288). We extract five template spectra to represent the morphology and environment of the Orion Bar PDR. The superb sensitivity and the spectral and spatial resolution of these JWST observations reveal many details of the AIB emission and enable an improved characterization of their detailed profile shapes and sub-components. While the spectra are dominated by the well-known AIBs at 3.3, 6.2, 7.7, 8.6, 11.2, and 12.7 $μ$m, a wealth of weaker features and sub-components are present. We report trends in the widths and relative strengths of AIBs across the five template spectra. These trends yield valuable insight into the photochemical evolution of PAHs, such as the evolution responsible for the shift of 11.2 $μ$m AIB emission from class B$_{11.2}$ in the molecular PDR to class A$_{11.2}$ in the PDR surface layers. This photochemical evolution is driven by the increased importance of FUV processing in the PDR surface layers, resulting in a "weeding out" of the weakest links of the PAH family in these layers. For now, these JWST observations are consistent with a model in which the underlying PAH family is composed of a few species: the so-called 'grandPAHs'.

astro-ph.GA↗

arXiv2023

PDRs4All II: JWST's NIR and MIR imaging view of the Orion Nebula

The JWST has captured the most detailed and sharpest infrared images ever taken of the inner region of the Orion Nebula, the nearest massive star formation region, and a prototypical highly irradiated dense photo-dissociation region (PDR). We investigate the fundamental interaction of far-ultraviolet photons with molecular clouds. The transitions across the ionization front (IF), dissociation front (DF), and the molecular cloud are studied at high-angular resolution. These transitions are relevant to understanding the effects of radiative feedback from massive stars and the dominant physical and chemical processes that lead to the IR emission that JWST will detect in many Galactic and extragalactic environments. Due to the proximity of the Orion Nebula and the unprecedented angular resolution of JWST, these data reveal that the molecular cloud borders are hyper structured at small angular scales of 0.1-1" (0.0002-0.002 pc or 40-400 au at 414 pc). A diverse set of features are observed such as ridges, waves, globules and photoevaporated protoplanetary disks. At the PDR atomic to molecular transition, several bright features are detected that are associated with the highly irradiated surroundings of the dense molecular condensations and embedded young star. Toward the Orion Bar PDR, a highly sculpted interface is detected with sharp edges and density increases near the IF and DF. This was predicted by previous modeling studies, but the fronts were unresolved in most tracers. A complex, structured, and folded DF surface was traced by the H2 lines. This dataset was used to revisit the commonly adopted 2D PDR structure of the Orion Bar. JWST provides us with a complete view of the PDR, all the way from the PDR edge to the substructured dense region, and this allowed us to determine, in detail, where the emission of the atomic and molecular lines, aromatic bands, and dust originate.

astro-ph.GA↗

arXiv2023

Detection of Interstellar $E$-1-cyano-1,3-butadiene in GOTHAM Observations of TMC-1

We report the detection of the lowest energy conformer of $E$-1-cyano-1,3-butadiene ($E$-1-C$_4$H$_5$CN), a linear isomer of pyridine, using the fourth data reduction of the GOTHAM deep spectral survey toward TMC-1 with the 100 m Green Bank Telescope. We performed velocity stacking and matched filter analyses using Markov chain Monte Carlo simulations and find evidence for the presence of this molecule at the 5.1$σ$ level. We derive a total column density of $3.8^{+1.0}_{-0.9}\times 10^{10}$ cm$^{-2}$, which is predominantly found toward two of the four velocity components we observe toward TMC-1. We use this molecule as a proxy for constraining the gas-phase abundance of the apolar hydrocarbon 1,3-butadiene. Based on the three-phase astrochemical modeling code NAUTILUS and an expanded chemical network, our model underestimates the abundance of cyano-1,3-butadiene by a factor of 19, with a peak column density of $2.34 \times 10^{10}\ \mathrm{cm}^{-2}$ for 1,3-butadiene. Compared to the modeling results obtained in previous GOTHAM analyses, the abundance of 1,3-butadiene is increased by about two orders of magnitude. Despite this increase, the modeled abundances of aromatic species do not appear to change and remain underestimated by 1--4 orders of magnitude. Meanwhile, the abundances of the five-membered ring molecules increase proportionally with 1,3-butadiene by two orders of magnitudes. We discuss implications for bottom-up formation routes to aromatic and polycyclic aromatic molecules.

astro-ph.GA↗