arXiv subjects

J. B. Bell

Publications and source records attributed to J. B. Bell.

At least 19 recordsLinked to original sources

arXiv2024

Comment on "Brownian motion of droplets induced by thermal noise"

We simulate phase separated fluids using the Cahn-Hillard fluctuating hydrodynamic (CH-FHD) model and measure the statistical properties of capillary waves generated by thermal fluctuations. Our measurements are in good agreement with stochastic lubrication theory and molecular dynamics simulations but differ significantly from recent CH-FHD results by Zhang et al. (Phys. Rev. E 109 024208 (2024)). Specifically, we find that capillary wave statistics at thermodynamic equilibrium are independent of transport properties, namely viscosity and species diffusion.

cond-mat.soft↗

arXiv2019

The Castro AMR Simulation Code: Current and Future Developments

We describe recent developments to the Castro astrophysics simulation code, focusing on new features that enable our simulations of X-ray bursts. Two highlights of Castro's ongoing development are the new integration technique to couple hydrodynamics and reactions to high order and GPU offloading. We discuss how these features will help offset some of the computational expense in X-ray burst models.

astro-ph.IM↗

arXiv2019

Improved Coupling of Hydrodynamics and Nuclear Reactions via Spectral Deferred Corrections

Simulations in stellar astrophysics involve the coupling of hydrodynamics and nuclear reactions under a wide variety of conditions, from simmering convective flows to explosive nucleosynthesis. Numerical techniques such as operator splitting (most notably Strang splitting) are usually employed to couple the physical processes, but this can affect the accuracy of the simulation, particularly when the burning is vigorous. Furthermore, Strang splitting does not have a straightforward extension to higher-order integration in time. We present a new temporal integration strategy based on spectral deferred corrections and describe the second- and fourth-order implementations in the open-source, finite-volume, compressible hydrodynamics code Castro. One notable advantage to these schemes is that they combine standard low-order discretizations for individual physical processes in a way that achieves an arbitrarily high order of accuracy. We demonstrate the improved accuracy of the new methods on several test problems of increasing complexity.

physics.comp-ph↗

arXiv2019

Towards the Distributed Burning Regime in Turbulent Premixed Flames

Three-dimensional numerical simulations of canonical statistically-steady statistically-planar turbulent flames have been used in an attempt to produce distributed burning in lean methane and hydrogen flames. Dilatation across the flame means that extremely large Karlovitz numbers are required; even at the extreme levels of turbulence studied (up to a Karlovitz number of 8767) distributed burning was only achieved in the hydrogen case. In this case, turbulence was found to broaden the reaction zone visually by around an order of magnitude, and thermodiffusive effects (typically present for lean hydrogen flames) were not observed. In the preheat zone, the species compositions differ considerably from those of one-dimensional flames based a number of different transport models (mixture-averaged, unity Lewis number, and a turbulent eddy viscosity model). The behaviour is a characteristic of turbulence dominating non-unity Lewis number species transport, and the distinct limit is again attributed to dilatation and its effect on the turbulence. Peak local reaction rates are found to be lower in the distributed case than in the lower Karlovitz cases but higher than in the laminar flame, which is attributed to effects that arise from the modified fuel-temperature distribution that results from turbulent mixing dominating low Lewis number thermodiffusive effects. Finally, approaches to achieve distributed burning at realisable conditions are discussed; factors that increase the likelihood of realising distributed burning are higher pressure, lower equivalence ratio, higher Lewis number, and lower reactant temperature.

physics.flu-dyn↗

arXiv2019

Toward Resolved Simulations of Burning Fronts in Thermonuclear X-ray Bursts

We discuss the challenges of modeling X-ray bursts in multi-dimensions, review the different calculations done to date, and discuss our new set of ongoing simulations. We also describe algorithmic improvements that may help in the future to offset some of the expense of these simulations, and describe what may be possible with exascale computing.

astro-ph.HE↗

arXiv2017

Meeting the Challenges of Modeling Astrophysical Thermonuclear Explosions: Castro, Maestro, and the AMReX Astrophysics Suite

We describe the AMReX suite of astrophysics codes and their application to modeling problems in stellar astrophysics. Maestro is tuned to efficiently model subsonic convective flows while Castro models the highly compressible flows associated with stellar explosions. Both are built on the block-structured adaptive mesh refinement library AMReX. Together, these codes enable a thorough investigation of stellar phenomena, including Type Ia supernovae and X-ray bursts. We describe these science applications and the approach we are taking to make these codes performant on current and future many-core and GPU-based architectures.

astro-ph.IM↗

arXiv2015

Comparisons of Two- and Three-Dimensional Convection in Type I X-ray Bursts

We perform the first detailed three-dimensional simulation of low Mach number convection preceding thermonuclear ignition in a mixed H/He X-ray burst. Our simulations include a moderate-sized, approximate network that captures hydrogen and helium burning up through rp-process breakout. We look in detail at the difference between two- and three-dimensional convective fields, including the details of the turbulent convection.

astro-ph.HE↗

arXiv2015

Fluctuating hydrodynamics of multispecies reactive mixtures

We formulate and study computationally the fluctuating compressible Navier-Stokes equations for reactive multi-species fluid mixtures. We contrast two different expressions for the covariance of the stochastic chemical production rate in the Langevin formulation of stochastic chemistry, and compare both of them to predictions of the chemical Master Equation for homogeneous well-mixed systems close to and far from thermodynamic equilibrium. We develop a numerical scheme for inhomogeneous reactive flows, based on our previous methods for non-reactive mixtures [K. Balakrishnan, A. L. Garcia, A. Donev and J. B. Bell, Phys. Rev. E 89:013017, 2014]. We study the suppression of non-equilibrium long-ranged correlations of concentration fluctuations by chemical reactions, as well as the enhancement of pattern formation by spontaneous fluctuations. Good agreement with available theory demonstrates that the formulation is robust and a useful tool in the study of fluctuations in reactive multi-species fluids. At the same time, several problems with Langevin formulations of stochastic chemistry are identified, suggesting that future work should examine combining Langevin and Master Equation descriptions of hydrodynamic and chemical fluctuations.

physics.flu-dyn↗

arXiv2015

Achieving algorithmic resilience for temporal integration through spectral deferred corrections

Spectral deferred corrections (SDC) is an iterative approach for constructing higher- order accurate numerical approximations of ordinary differential equations. SDC starts with an initial approximation of the solution defined at a set of Gaussian or spectral collocation nodes over a time interval and uses an iterative application of lower-order time discretizations applied to a correction equation to improve the solution at these nodes. Each deferred correction sweep increases the formal order of accuracy of the method up to the limit inherent in the accuracy defined by the collocation points. In this paper, we demonstrate that SDC is well suited to recovering from soft (transient) hardware faults in the data. A strategy where extra correction iterations are used to recover from soft errors and provide algorithmic resilience is proposed. Specifically, in this approach the iteration is continued until the residual (a measure of the error in the approximation) is small relative to the residual on the first correction iteration and changes slowly between successive iterations. We demonstrate the effectiveness of this strategy for both canonical test problems and a comprehen- sive situation involving a mature scientific application code that solves the reacting Navier-Stokes equations for combustion research.

cs.CE↗

arXiv2015

Low Mach Number Fluctuating Hydrodynamics of Multispecies Liquid Mixtures

We develop a low Mach number formulation of the hydrodynamic equations describing transport of mass and momentum in a multispecies mixture of incompressible miscible liquids at specified temperature and pressure that generalizes our prior work on ideal mixtures of ideal gases and binary liquid mixtures. In this formulation we combine and extend a number of existing descriptions of multispecies transport available in the literature. The formulation applies to non-ideal mixtures of arbitrary number of species, without the need to single out a 'solvent' species, and includes contributions to the diffusive mass flux due to gradients of composition, temperature and pressure. Momentum transport and advective mass transport are handled using a low Mach number approach that eliminates fast sound waves (pressure fluctuations) from the full compressible system of equations and leads to a quasi-incompressible formulation. Thermal fluctuations are included in our fluctuating hydrodynamics description following the principles of nonequilibrium thermodynamics. We extend the semi-implicit staggered-grid finite-volume numerical method developed in our prior work on binary liquid mixtures, and use it to study the development of giant nonequilibrium concentration fluctuations in a ternary mixture subjected to a steady concentration gradient. We also numerically study the development of diffusion-driven gravitational instabilities in a ternary mixture, and compare our numerical results to recent experimental measurements in a Hele-Shaw cell. We find that giant nonequilibrium fluctuations can trigger the instability but are eventually dominated by the deterministic growth of the unstable mode, in both quasi two-dimensional (Hele-Shaw), and fully three-dimensional geometries used in typical shadowgraph experiments.

physics.flu-dyn↗

arXiv2014

Low Mach Number Fluctuating Hydrodynamics of Binary Liquid Mixtures

Continuing on our previous work [ArXiv:1212.2644], we develop semi-implicit numerical methods for solving low Mach number fluctuating hydrodynamic equations appropriate for modeling diffusive mixing in isothermal mixtures of fluids with different densities and transport coefficients. We treat viscous dissipation implicitly using a recently-developed variable-coefficient Stokes solver [ArXiv:1308.4605]. This allows us to increase the time step size significantly compared to the earlier explicit temporal integrator. For viscous-dominated flows, such as flows at small scales, we develop a scheme for integrating the overdamped limit of the low Mach equations, in which inertia vanishes and the fluid motion can be described by a steady Stokes equation. We also describe how to incorporate advanced higher-order Godunov advection schemes in the numerical method, allowing for the treatment of fluids with high Schmidt number including the vanishing mass diffusion coefficient limit. We incorporate thermal fluctuations in the description in both the inertial and overdamped regimes. We apply our algorithms to model the development of giant concentration fluctuations during the diffusive mixing of water and glycerol, and compare numerical results with experimental measurements. We find good agreement between the two, and observe propagative (non-diffusive) modes at small wavenumbers (large spatial scales), not reported in published experimental measurements of concentration fluctuations in fluid mixtures. Our work forms the foundation for developing low Mach number fluctuating hydrodynamics methods for miscible multi-species mixtures of chemically reacting fluids.

math.NA↗

arXiv2014

Multidimensional Modeling of Type I X-ray Bursts. II. Two-Dimensional Convection in a Mixed H/He Accretor

Type I X-ray Bursts (XRBs) are thermonuclear explosions of accreted material on the surfaces of a neutron stars in low mass X-ray binaries. Prior to the ignition of a subsonic burning front, runaway burning at the base of the accreted layer drives convection that mixes fuel and heavy-element ashes. In this second paper in a series, we explore the behavior of this low Mach number convection in mixed hydrogen/helium layers on the surface of a neutron star using two-dimensional simulations with the Maestro code. Maestro takes advantage of the highly subsonic flow field by filtering dynamically unimportant sound waves while retaining local compressibility effects, such as those due to stratification and energy release from nuclear reactions. In these preliminary calculations, we find that the rp-process approximate network creates a convective region that is split into two layers. While this splitting appears artificial due to the approximations of the network regarding nuclear flow out of the breakout reaction 18Ne(a,p)21Na, these calculations hint at further simplifications and improvements of the burning treatment for use in subsequent calculations in three dimensions for a future paper.

astro-ph.HE↗

arXiv2014

Cosmological Fluid Mechanics with Adaptively Refined Large Eddy Simulations

We investigate turbulence generated by cosmological structure formation by means of large eddy simulations using adaptive mesh refinement. In contrast to the widely used implicit large eddy simulations, which resolve a limited range of length scales and treat the effect of turbulent velocity fluctuations below the grid scale solely by numerical dissipation, we apply a subgrid-scale model for the numerically unresolved fraction of the turbulence energy. For simulations with adaptive mesh refinement, we utilize a new methodology that allows us to adjust the scale-dependent energy variables in such a way that the sum of resolved and unresolved energies is globally conserved. We test our approach in simulations of randomly forced turbulence, a gravitationally bound cloud in a wind, and the Santa Barbara cluster. To treat inhomogeneous turbulence, we introduce an adaptive Kalman filtering technique that separates turbulent velocity fluctuations on resolved length scales from the non-turbulent bulk flow. From the magnitude of the fluctuating component and the subgrid-scale turbulence energy, a total turbulent velocity dispersion of several 100 km/s is obtained for the Santa Barbara cluster, while the low-density gas outside the accretion shocks is nearly devoid of turbulence. The energy flux through the turbulent cascade and the dissipation rate predicted by the subgrid-scale model correspond to dynamical time scales around 5 Gyr, independent of numerical resolution.

astro-ph.CO↗

arXiv2013

The Deflagration Stage of Chandrasekhar Mass Models For Type Ia Supernovae: I. Early Evolution

We present high-resolution, full-star simulations of the post-ignition phase of Type Ia supernovae using the compressible hydrodynamics code Castro. Initial conditions, including the turbulent velocity field and ignition site, are imported directly from a simulation of the last few hours of presupernova convection using a low Mach number code, Maestro. Adaptive mesh refinement allows the initial burning front to be modeled with an effective resolution of 36,864^3 zones (~136 m/zone). The initial rise and expansion of the deflagration front are tracked until burning reaches the star's edge and the role of the background turbulence on the flame is investigated. The effect of artificially moving the ignition location closer to the star's center is explored. The degree to which turbulence affects the burning front decreases with increasing ignition radius since the buoyancy force is stronger at larger radii. Even central ignition --- in the presence of a background convective flow field --- is rapidly carried off-center as the flame is carried by the flow field. We compare our results to analytic models for burning thermals, and find that they reproduce the general trends of the bubble's size and mass, but underpredict the amount of buoyant acceleration due to simplifying assumptions of the bubble's properties. Overall, we find that the amount of mass that burns prior to flame break out is small, consistent with a "gravitationally confined detonation" occurring at a later epoch, but additional burning will occur following breakout that may modify this conclusion.

astro-ph.SR↗

arXiv2013

High-Order Algorithms for Compressible Reacting Flow with Complex Chemistry

In this paper we describe a numerical algorithm for integrating the multicomponent, reacting, compressible Navier-Stokes equations, targeted for direct numerical simulation of combustion phenomena. The algorithm addresses two shortcomings of previous methods. First, it incorporates an eighth-order narrow stencil approximation of diffusive terms that reduces the communication compared to existing methods and removes the need to use a filtering algorithm to remove Nyquist frequency oscillations that are not damped with traditional approaches. The methodology also incorporates a multirate temporal integration strategy that provides an efficient mechanism for treating chemical mechanisms that are stiff relative to fluid dynamical time scales. The overall methodology is eighth order in space with option for fourth order to eighth order in time. The implementation uses a hybrid programming model designed for effective utilization of many-core architectures. We present numerical results demonstrating the convergence properties of the algorithm with realistic chemical kinetics and illustrating its performance characteristics. We also present a validation example showing that the algorithm matches detailed results obtained with an established low Mach number solver.

math.NA↗

arXiv2013

Efficient Variable-Coefficient Finite-Volume Stokes Solvers

We investigate several robust preconditioners for solving the saddle-point linear systems that arise from spatial discretization of unsteady and steady variable-coefficient Stokes equations on a uniform staggered grid. Building on the success of using the classical projection method as a preconditioner for the coupled velocity-pressure system [B. E. Griffith, J. Comp. Phys., 228 (2009), pp. 75657595], as well as established techniques for steady and unsteady Stokes flow in the finite-element literature, we construct preconditioners that employ independent generalized Helmholtz and Poisson solvers for the velocity and pressure subproblems. We demonstrate that only a single cycle of a standard geometric multigrid algorithm serves as an effective inexact solver for each of these subproblems. Contrary to traditional wisdom, we find that the Stokes problem can be solved nearly as efficiently as the independent pressure and velocity subproblems, making the overall cost of solving the Stokes system comparable to the cost of classical projection or fractional step methods for incompressible flow, even for steady flow and in the presence of large density and viscosity contrasts. Two of the five preconditioners considered here are found to be robust to GMRES restarts and to increasing problem size, making them suitable for large-scale problems. Our work opens many possibilities for constructing novel unsplit temporal integrators for finite-volume spatial discretizations of the equations of low Mach and incompressible flow dynamics.

math.NA↗

arXiv2013

Carbon Deflagration in Type Ia Supernova: I. Centrally Ignited Models

A leading model for Type Ia supernovae (SNe Ia) begins with a white dwarf near the Chandrasekhar mass that ignites a degenerate thermonuclear runaway close to its center and explodes. In a series of papers, we shall explore the consequences of ignition at several locations within such dwarfs. Here we assume central ignition, which has been explored before, however, the problem is worth revisiting, if only to validate those previous studies and to further elucidate the relevant physics for future work. A perturbed sphere of hot iron ash with a radius of ~100 km is initialized at the middle of the star. The subsequent explosion is followed in several simulations using a thickened flame model in which the flame speed is either fixed --- within the range expected from turbulent combustion --- or based on the local turbulent intensity. Global results, including the explosion energy and bulk nucleosynthesis (e.g. 56Ni of 0.48--0.56 $\Msun$) turn out to be insensitive to this speed. In all completed runs, the energy released by the nuclear burning is adequate to unbind the star, but not enough to give the energy and brightness of typical SNe Ia. As found previously, the chemical stratification observed in typical events is not reproduced. These models produce a large amount of unburned carbon and oxygen in central low velocity regions, which is inconsistent with spectroscopic observations, and the intermediate mass elements and iron group elements are strongly mixed during the explosion.

astro-ph.HE↗

arXiv2012

Low Mach Number Modeling of Convection in Helium Shells on Sub-Chandrasekhar White Dwarfs. I. Methodology

We assess the robustness of a low Mach number hydrodynamics algorithm for modeling helium shell convection on the surface of a white dwarf in the context of the sub-Chandrasekhar model for Type Ia supernovae. We use the low Mach number stellar hydrodynamics code, MAESTRO, to perform three-dimensional, spatially-adaptive simulations of convection leading up to the point of the ignition of a burning front. We show that the low Mach number hydrodynamics model provides a robust description of the system.

astro-ph.SR↗