arXiv subjects

Juan Martínez-Sykora

Publications and source records attributed to Juan Martínez-Sykora.

24 records · Page 2Linked to original sources

arXiv2017

Two-dimensional Radiative Magnetohydrodynamic Simulations of Partial Ionization in the Chromosphere. II. Dynamics and Energetics of the Low Solar Atmosphere

We investigate the effects of interactions between ions and neutrals on the chromosphere and overlying corona using 2.5D radiative MHD simulations with the Bifrost code. We have extended the code capabilities implementing ion-neutral interaction effects using the Generalized Ohm's Law, i.e., we include the Hall term and the ambipolar diffusion (Pedersen dissipation) in the induction equation. Our models span from the upper convection zone to the corona, with the photosphere, chromosphere and transition region partially ionized. Our simulations reveal that the interactions between ionized particles and neutral particles have important consequences for the magneto-thermodynamics of these modeled layers: 1) ambipolar diffusion increases the temperature in the chromosphere; 2) sporadically the horizontal magnetic field in the photosphere is diffused into the chromosphere due to the large ambipolar diffusion; 3) ambipolar diffusion concentrates electrical currents leading to more violent jets and reconnection processes, resulting in 3a) the formation of longer and faster spicules, 3b) heating of plasma during the spicule evolution, and 3c) decoupling of the plasma and magnetic field in spicules. Our results indicate that ambipolar diffusion is a critical ingredient for understanding the magneto-thermo-dynamic properties in the chromosphere and transition region. The numerical simulations have been made publicly available, similar to previous Bifrost simulations. This will allow the community to study realistic numerical simulations with a wider range of magnetic field configurations and physics modules than previously possible.

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arXiv2015

Internetwork chromospheric bright grains observed with IRIS

The Interface Region Imaging Spectrograph (IRIS) reveals small-scale rapid brightenings in the form of bright grains all over coronal holes and the quiet sun. These bright grains are seen with the IRIS 1330 Å, 1400 Å and 2796 Å slit-jaw filters. We combine coordinated observations with IRIS and from the ground with the Swedish 1-m Solar Telescope (SST) which allows us to have chromospheric (Ca II 8542 Å, Ca II H 3968 Å, Hα, and Mg II k 2796 Å), and transition region (C II 1334 Å, Si IV 1402) spectral imaging, and single-wavelength Stokes maps in Fe I 6302 Åat high spatial (0.33"), temporal and spectral resolution. We conclude that the IRIS slit-jaw grains are the counterpart of so-called acoustic grains, i.e., resulting from chromospheric acoustic waves in a non-magnetic environment. We compare slit-jaw images with spectra from the IRIS spectrograph. We conclude that the grain intensity in the 2796 Å slit-jaw filter comes from both the Mg II k core and wings. The signal in the C II and Si IV lines is too weak to explain the presence of grains in the 1300 and 1400 Å slit-jaw images and we conclude that the grain signal in these passbands comes mostly from the continuum. Even though weak, the characteristic shock signatures of acoustic grains can often be detected in IRIS C II spectra. For some grains, spectral signature can be found in IRIS Si IV. This suggests that upward propagating acoustic waves sometimes reach all the way up to the transition region.

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arXiv2011

The stellar atmosphere simulation code Bifrost

Context: Numerical simulations of stellar convection and photospheres have been developed to the point where detailed shapes of observed spectral lines can be explained. Stellar atmospheres are very complex, and very different physical regimes are present in the convection zone, photosphere, chromosphere, transition region and corona. To understand the details of the atmosphere it is necessary to simulate the whole atmosphere since the different layers interact strongly. These physical regimes are very diverse and it takes a highly efficient massively parallel numerical code to solve the associated equations. Aims: The design, implementation and validation of the massively parallel numerical code Bifrost for simulating stellar atmospheres from the convection zone to the corona. Methods: The code is subjected to a number of validation tests, among them the Sod shock tube test, the Orzag-Tang colliding shock test, boundary condition tests and tests of how the code treats magnetic field advection, chromospheric radiation, radiative transfer in an isothermal scattering atmosphere, hydrogen ionization and thermal conduction. Results: Bifrost completes the tests with good results and shows near linear efficiency scaling to thousands of computing cores.

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arXiv2011

On the origin of the Type~{\sc ii} spicules - dynamic 3D MHD simulations

have forced the definition of a new type of spicule, "type II's", that are characterized by rising rapidly, having short lives, and by fading away at the end of their lifetimes. Here, we report on features found in realistic 3D simulations of the outer solar atmosphere that resemble the observed type II spicules. These features evolve naturally from the simulations as a consequence of the magnetohydrodynamical evolution of the model atmosphere. The simulations span from the upper layer of the convection zone to the lower corona and include the emergence of horizontal magnetic flux. The state-of-art Oslo Staggered Code (OSC) is used to solve the full MHD equations with non-grey and non-LTE radiative transfer and thermal conduction along the magnetic field lines. We describe in detail the physics involved in a process which we consider a possible candidate as a driver mechanism to produce type II spicules. The modeled spicule is composed of material rapidly ejected from the chromosphere that rises into the corona while being heated. Its source lies in a region with large field gradients and intense electric currents, which lead to a strong Lorentz force that squeezes the chromospheric material, resulting in a vertical pressure gradient that propels the spicule along the magnetic field, as well as Joule heating, which heats the the jet material, forcing it to fade.

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arXiv2010

2 types of spicules "observed" in 3D realistic models

Realistic numerical 3D models of the outer solar atmosphere show two different kind of spicule-like phenomena, as also observed on the solar limb. The numerical models are calculated using the 2 types of spicules "observed" in 3D realistic models Oslo Staggered Code (OSC) to solve the full MHD equations with non-grey and NLTE radiative transfer and thermal conduction along the magnetic field lines. The two types of spicules arise as a natural result of the dynamical evolution in the models. We discuss the different properties of these two types of spicules, their differences from observed spicules and what needs to be improved in the models.

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arXiv2007

Twisted flux tube emergence from the convection zone to the corona

3D numerical simulations of a horizontal magnetic flux tube emergence with different twist are carried out in a computational domain spanning the upper layers of the convection zone to the lower corona. We use the Oslo Staggered Code to solve the full MHD equations with non-grey and non-LTE radiative transfer and thermal conduction along the magnetic field lines. The emergence of the magnetic flux tube input at the bottom boundary into a weakly magnetized atmosphere is presented. The photospheric and chromospheric response is described with magnetograms, synthetic images and velocity field distributions. The emergence of a magnetic flux tube into such an atmosphere results in varied atmospheric responses. In the photosphere the granular size increases when the flux tube approaches from below. In the convective overshoot region some 200km above the photosphere adiabatic expansion produces cooling, darker regions with the structure of granulation cells. We also find collapsed granulation in the boundaries of the rising flux tube. Once the flux tube has crossed the photosphere, bright points related with concentrated magnetic field, vorticity, high vertical velocities and heating by compressed material are found at heights up to 500km above the photosphere. At greater heights in the magnetized chromosphere, the rising flux tube produces a cool, magnetized bubble that tends to expel the usual chromospheric oscillations. In addition the rising flux tube dramatically increases the chromospheric scale height, pushing the transition region and corona aside such that the chromosphere extends up to 6Mm above the photosphere. The emergence of magnetic flux tubes through the photosphere to the lower corona is a relatively slow process, taking of order 1 hour.

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