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Junbin Gao

Publications and source records attributed to Junbin Gao.

At least 37 records · Page 2Linked to original sources

S$^3$GNN: Efficient Global Mixing and Local Message Passing for Long-Range Graph Learning

Message-passing neural networks (MPNNs) often suffer from an information bottleneck when capturing long-range dependencies, leading to the oversquashing (OSQ) phenomenon. Alongside spatial connectivity enrichment (e.g., rewiring), recent studies have shown that spectral filtering can yield strong long-range learning outcomes, as spectral operators enable global information mixing that alleviates OSQ. These approaches achieve this either by stabilizing the Jacobian energies in deep propagation or by guaranteeing OSQ mitigation under strong theoretical assumptions. We revisit these conclusions and show that the associated Jacobian sensitivity lower bound is generally difficult to achieve in practice. We then propose S$^3$GNN, which mitigates OSQ without such restrictive assumptions by lightweightly reintroducing omitted components with substantially lower computational complexity, while standard stability constraints on feature transformations remain effective under our new dynamics. Extensive experiments across diverse domains (e.g., long-range benchmarks, KGQA, and mesh-based fluid dynamics) demonstrate that S$^3$GNN achieves up to an order-of-magnitude error reduction with up to 50\% fewer parameters. Our code can be found in https://github.com/EEthanShi/S3-GNN.git.

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LOFT: Low-Rank Orthogonal Fine-Tuning via Task-Aware Support Selection

Orthogonal parameter-efficient fine-tuning (PEFT) adapts pretrained weights through structure-preserving multiplicative transformations, but existing methods often conflate two distinct design choices: the subspace in which adaptation occurs and the transformation applied within that subspace. This paper introduces LOFT, a low-rank orthogonal fine-tuning framework that explicitly separates these two components. By viewing orthogonal adaptation as a multiplicative subspace rotation, LOFT provides a unified formulation that recovers representative orthogonal PEFT methods, including coordinate-, butterfly-, Householder-, and principal-subspace-based variants. More importantly, this perspective exposes support selection as a central design axis rather than a byproduct of a particular parameterization. We develop a first-order analysis showing that useful adaptation supports should be informed by the downstream training signal, motivating practical task-aware support selection strategies. Across language understanding, visual transfer, mathematical reasoning, and multilingual out-of-distribution adaptation, LOFT recovers principal-subspace orthogonal adaptation while gradient-informed supports improve the efficiency-performance trade-off under matched parameter, memory, and compute budgets. These results suggest that principled support selection is an important direction for improving orthogonal PEFT.

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Contrastive Identification and Generation in the Limit

In the classical identification in the limit model of Gold [1967], a stream of positive examples is presented round by round, and the learner must eventually recover the target hypothesis. Recently, Kleinberg and Mullainathan [2024] introduced generation in the limit, where the learner instead must eventually output novel elements of the target's support. Both lines of work focus on positive-only or fully labeled data. Yet many natural supervision signals are inherently relational rather than singleton, which encode relationships between examples rather than labels of individual ones. We initiate the study of contrastive identification and generation in the limit, where the learner observes a contrastive presentation of data: a stream of unordered pairs $\{x,y\}$ satisfying $h(x)\ne h(y)$ for an unknown target binary hypothesis $h$, but which element is positive is hidden from the learner. We first present three results in the noiseless setting: an exact characterization of contrastive identifiable classes (a one-line geometric refinement of Angluin [1980]'s tell-tale condition), a combinatorial dimension called contrastive closure dimension (a contrasitive analogue of the closure dimension in Raman et al. [2025]) and exactly characterizing uniform contrastive generation with tight sample complexity, and a strict hierarchy in which contrastive generation and text identification are mutually incomparable. We then prove a sharp reversal under finite adversarial corruption: there exist classes identifiable from contrastive pairs under any finite corruption budget by a single budget-independent algorithm, yet not identifiable from positive examples under even one corrupted observation. The unifying technical object is the common crossing graph, which encodes pairwise ambiguity, family-level generation obstructions, and corruption defects in a single coverage-and-incidence language.

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ATOM: A Pretrained Neural Operator for Multitask Molecular Dynamics

Molecular dynamics (MD) simulations underpin modern computational drug discovery, materials science, and biochemistry. Recent machine learning models provide high-fidelity MD predictions without the need to repeatedly solve quantum mechanical forces, enabling significant speedups over conventional pipelines. Yet many such methods typically enforce strict equivariance and rely on sequential rollouts, thus limiting their flexibility and simulation efficiency. They are also commonly single-task, trained on individual molecules and fixed timeframes, which restricts generalization to unseen compounds and extended timesteps. To address these issues, we propose Atomistic Transformer Operator for Molecules (ATOM), a pretrained transformer neural operator for multitask molecular dynamics. ATOM adopts a quasi-equivariant design that requires no explicit molecular graph and employs a temporal attention mechanism, allowing for the accurate parallel decoding of multiple future states. To support operator pretraining across chemicals and timescales, we curate TG80, a large, diverse, and numerically stable MD dataset with over 2.5 million femtoseconds of trajectories across 80 compounds. ATOM achieves state-of-the-art performance on established single-task benchmarks, such as MD17, RMD17 and MD22. After multitask pretraining on TG80, ATOM shows exceptional zero-shot generalization to unseen molecules across varying time horizons. We believe ATOM represents a significant step toward accurate, efficient, and transferable molecular dynamics models.

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On the Price of Privacy for Language Identification and Generation

As large language models (LLMs) are increasingly trained on sensitive user data, understanding the fundamental cost of privacy in language learning becomes essential. We initiate the study of differentially private (DP) language identification and generation in the agnostic statistical setting, establishing algorithms and matching lower bounds that precisely quantify the cost of privacy. For both tasks, approximate $(\varepsilon, δ)$-DP with constant $\varepsilon > 0$ recovers the non-private error rates: $\exp(-r(n))$ for identification (for any $r(n) = o(n)$) and $\exp(-Ω(n))$ for generation. Under pure $\varepsilon$-DP, the exponents degrade by a multiplicative factor of $\min\{1, \varepsilon\}$, which we show is tight up to constants. Notably, for generation under pure DP with mild assumptions, the upper bound $\exp(-\min\{1,\varepsilon\} \cdot Ω(n))$ matches the lower bound up to some constants, establishing an optimal rate. Our results show that the cost of privacy in language learning is surprisingly mild: absent entirely under approximate DP, and exactly a $\min\{1,\varepsilon\}$ factor in the exponent under pure DP.

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ACT as Human: Multimodal Large Language Model Data Annotation with Critical Thinking

Supervised learning relies on high-quality labeled data, but obtaining such data through human annotation is both expensive and time-consuming. Recent work explores using large language models (LLMs) for annotation, but LLM-generated labels still fall short of human-level quality. To address this problem, we propose the Annotation with Critical Thinking (ACT) data pipeline, where LLMs serve not only as annotators but also as judges to critically identify potential errors. Human effort is then directed towards reviewing only the most "suspicious" cases, significantly improving the human annotation efficiency. Our major contributions are as follows: (1) ACT is applicable to a wide range of domains, including natural language processing (NLP), computer vision (CV), and multimodal understanding, by leveraging multimodal-LLMs (MLLMs). (2) Through empirical studies, we derive 7 insights on how to enhance annotation quality while efficiently reducing the human cost, and then translate these findings into user-friendly guidelines. (3) We theoretically analyze how to modify the loss function so that models trained on ACT data achieve similar performance to those trained on fully human-annotated data. Our experiments show that the performance gap can be reduced to less than 2% on most benchmark datasets while saving up to 90% of human costs.

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Wiener Chaos Expansion based Neural Operator for Singular Stochastic Partial Differential Equations

In this paper, we explore how our recently developed Wiener Chaos Expansion (WCE)-based neural operator (NO) can be applied to singular stochastic partial differential equations, e.g., the dynamic $\boldsymbolΦ^4_2$ model simulated in the recent works. Unlike the previous WCE-NO which solves SPDEs by simply inserting Wick-Hermite features into the backbone NO model, we leverage feature-wise linear modulation (FiLM) to appropriately capture the dependency between the solution of singular SPDE and its smooth remainder. The resulting WCE-FiLM-NO shows excellent performance on $\boldsymbolΦ^4_2$, as measured by relative $L_2$ loss, out-of-distribution $L_2$ loss, and autocorrelation score; all without the help of renormalisation factor. In addition, we also show the potential of simulating $\boldsymbolΦ^4_3$ data, which is more aligned with real scientific practice in statistical quantum field theory. To the best of our knowledge, this is among the first works to develop an efficient data-driven surrogate for the dynamical $\boldsymbolΦ^4_3$ model.

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Expanding the Chaos: Neural Operator for Stochastic (Partial) Differential Equations

Stochastic differential equations (SDEs) and stochastic partial differential equations (SPDEs) are fundamental for modeling stochastic dynamics across the natural sciences and modern machine learning. Learning their solution operators with deep learning models promises fast solvers and new perspectives on classical learning tasks. In this work, we build on Wiener-chaos expansions (WCE) to design neural operator (NO) architectures for SDEs and SPDEs: we project driving noise paths onto orthonormal Wick-Hermite features and use NOs to parameterize the resulting chaos coefficients, enabling reconstruction of full trajectories from noise in a single forward pass. We also make the underlying WCE structure explicit for multi-dimensional SDEs and semilinear SPDEs by showing the coupled deterministic ODE/PDE systems governing these coefficients. Empirically, we achieve competitive accuracy across several tasks, including standard SPDE benchmarks and SDE-based diffusion one-step image sampling, topological graph interpolation, financial extrapolation, parameter estimation, and manifold SDE flood forecasting. These results suggest WCE-based neural operators are a practical and scalable approach to learning SDE/SPDE solution operators across domains.

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Toward an Integrated Cross-Urban Accident Prevention System: A Multi-Task Spatial-Temporal Learning Framework for Urban Safety Management

The development of a cross-city accident prevention system is particularly challenging due to the heterogeneity, inconsistent reporting, and inherently clustered, sparse, cyclical, and noisy nature of urban accident data. These intrinsic data properties, combined with fragmented governance and incompatible reporting standards, have long hindered the creation of an integrated, cross-city accident prevention framework. To address this gap, we propose the Mamba Local-ttention Spatial-Temporal Network MLA-STNet, a unified system that formulates accident risk prediction as a multi-task learning problem across multiple cities. MLA-STNet integrates two complementary modules: (i)the Spatio-Temporal Geographical Mamba-Attention (STG-MA), which suppresses unstable spatio-temporal fluctuations and strengthens long-range temporal dependencies; and (ii) the Spatio-Temporal Semantic Mamba-Attention (STS-MA), which mitigates cross-city heterogeneity through a shared-parameter design that jointly trains all cities while preserving individual semantic representation spaces. We validate the proposed framework through 75 experiments under two forecasting scenarios, full-day and high-frequency accident periods, using real-world datasets from New York City and Chicago. Compared with the state-of-the-art baselines, MLA-STNet achieves up to 6% lower RMSE, 8% higher Recall, and 5% higher MAP, while maintaining less than 1% performance variation under 50% input noise. These results demonstrate that MLA-STNet effectively unifies heterogeneous urban datasets within a scalable, robust, and interpretable Cross-City Accident Prevention System, paving the way for coordinated and data-driven urban safety management.

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Signals, Concepts, and Laws: Toward Universal, Explainable Time-Series Forecasting

Accurate, explainable and physically credible forecasting remains a persistent challenge for multivariate time-series whose statistical properties vary across domains. We propose DORIC, a Domain-Universal, ODE-Regularized, Interpretable-Concept Transformer for Time-Series Forecasting that generates predictions through five self-supervised, domain-agnostic concepts while enforcing differentiable residuals grounded in first-principles constraints.

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From Noise to Laws: Regularized Time-Series Forecasting via Denoised Dynamic Graphs

Long-horizon multivariate time-series forecasting is challenging because realistic predictions must (i) denoise heterogeneous signals, (ii) track time-varying cross-series dependencies, and (iii) remain stable and physically plausible over long rollout horizons. We present PRISM, which couples a score-based diffusion preconditioner with a dynamic, correlation-thresholded graph encoder and a forecast head regularized by generic physics penalties. We prove contraction of the induced horizon dynamics under mild conditions and derive Lipschitz bounds for graph blocks, explaining the model's robustness. On six standard benchmarks , PRISM achieves consistent SOTA with strong MSE and MAE gains.

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Hybrid-Collaborative Augmentation and Contrastive Sample Adaptive-Differential Awareness for Robust Attributed Graph Clustering

Due to its powerful capability of self-supervised representation learning and clustering, contrastive attributed graph clustering (CAGC) has achieved great success, which mainly depends on effective data augmentation and contrastive objective setting. However, most CAGC methods utilize edges as auxiliary information to obtain node-level embedding representation and only focus on node-level embedding augmentation. This approach overlooks edge-level embedding augmentation and the interactions between node-level and edge-level embedding augmentations across various granularity. Moreover, they often treat all contrastive sample pairs equally, neglecting the significant differences between hard and easy positive-negative sample pairs, which ultimately limits their discriminative capability. To tackle these issues, a novel robust attributed graph clustering (RAGC), incorporating hybrid-collaborative augmentation (HCA) and contrastive sample adaptive-differential awareness (CSADA), is proposed. First, node-level and edge-level embedding representations and augmentations are simultaneously executed to establish a more comprehensive similarity measurement criterion for subsequent contrastive learning. In turn, the discriminative similarity further consciously guides edge augmentation. Second, by leveraging pseudo-label information with high confidence, a CSADA strategy is elaborately designed, which adaptively identifies all contrastive sample pairs and differentially treats them by an innovative weight modulation function. The HCA and CSADA modules mutually reinforce each other in a beneficent cycle, thereby enhancing discriminability in representation learning. Comprehensive graph clustering evaluations over six benchmark datasets demonstrate the effectiveness of the proposed RAGC against several state-of-the-art CAGC methods.

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Graph Signal Processing for Global Stock Market Realized Volatility Forecasting

This paper introduces an innovative realized volatility (RV) forecasting framework that extends the conventional Heterogeneous autoregressive (HAR) model via integrating Graph Signal Processing (GSP). The study first evaluates various constructions of volatility-interrelationship networks by analyzing how the associated graph signal energy tracks global financial market volatility. Volatility spillovers are subsequently embedded into the proposed framework, which employs the graph Fourier transform (GFT) and its inverse to effectively capture global stock market dynamics in both the spectral and spatial domains. The framework not only provides a global context for modeling the volatility interrelationships, but also captures the nonlinearity and directionality of the volatility spillover effect. The empirical study using RV data of $24$ global stock market indices compares short-, mid- and long-term RV forecasts with various HAR-type benchmarks and a graph neural network-based HAR model. The proposed model consistently outperforms all comparators, demonstrating the effectiveness of integrating GSP into the HAR model for RV forecasting.

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Global Stock Market Volatility Forecasting Incorporating Dynamic Graphs and All Trading Days

This paper introduces a global stock market volatility forecasting model that enhances forecasting accuracy and practical utility in real-world financial decision-making by integrating dynamic graph structures and encompassing all active trading days of different stock markets. The model employs a spatial-temporal graph neural network architecture to capture the volatility spillover effect, where shocks in one market spread to others through the interconnective global economy. By calculating the volatility spillover index to depict the volatility network as graphs, the model effectively mirrors the volatility dynamics for the chosen stock market indices. In the empirical analysis covering 8 global market indices, the realized volatility forecasting performance of the proposed model surpasses the baseline models in all forecasting scenarios.

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STPFormer: A State-of-the-Art Pattern-Aware Spatio-Temporal Transformer for Traffic Forecasting

Spatio-temporal traffic forecasting is challenging due to complex temporal patterns, dynamic spatial structures, and diverse input formats. Although Transformer-based models offer strong global modeling, they often struggle with rigid temporal encoding and weak space-time fusion. We propose STPFormer, a Spatio-Temporal Pattern-Aware Transformer that achieves state-of-the-art performance via unified and interpretable representation learning. It integrates four modules: Temporal Position Aggregator (TPA) for pattern-aware temporal encoding, Spatial Sequence Aggregator (SSA) for sequential spatial learning, Spatial-Temporal Graph Matching (STGM) for cross-domain alignment, and an Attention Mixer for multi-scale fusion. Experiments on five real-world datasets show that STPFormer consistently sets new SOTA results, with ablation and visualizations confirming its effectiveness and generalizability.

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SVDformer: Direction-Aware Spectral Graph Embedding Learning via SVD and Transformer

Directed graphs are widely used to model asymmetric relationships in real-world systems. However, existing directed graph neural networks often struggle to jointly capture directional semantics and global structural patterns due to their isotropic aggregation mechanisms and localized filtering mechanisms. To address this limitation, this paper proposes SVDformer, a novel framework that synergizes SVD and Transformer architecture for direction-aware graph representation learning. SVDformer first refines singular value embeddings through multi-head self-attention, adaptively enhancing critical spectral components while suppressing high-frequency noise. This enables learnable low-pass/high-pass graph filtering without requiring spectral kernels. Furthermore, by treating singular vectors as directional projection bases and singular values as scaling factors, SVDformer uses the Transformer to model multi-scale interactions between incoming/outgoing edge patterns through attention weights, thereby explicitly preserving edge directionality during feature propagation. Extensive experiments on six directed graph benchmarks demonstrate that SVDformer consistently outperforms state-of-the-art GNNs and direction-aware baselines on node classification tasks, establishing a new paradigm for learning representations on directed graphs.

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PREIG: Physics-informed and Reinforcement-driven Interpretable GRU for Commodity Demand Forecasting

Accurately forecasting commodity demand remains a critical challenge due to volatile market dynamics, nonlinear dependencies, and the need for economically consistent predictions. This paper introduces PREIG, a novel deep learning framework tailored for commodity demand forecasting. The model uniquely integrates a Gated Recurrent Unit (GRU) architecture with physics-informed neural network (PINN) principles by embedding a domain-specific economic constraint: the negative elasticity between price and demand. This constraint is enforced through a customized loss function that penalizes violations of the physical rule, ensuring that model predictions remain interpretable and aligned with economic theory. To further enhance predictive performance and stability, PREIG incorporates a hybrid optimization strategy that couples NAdam and L-BFGS with Population-Based Training (POP). Experiments across multiple commodities datasets demonstrate that PREIG significantly outperforms traditional econometric models (ARIMA,GARCH) and deep learning baselines (BPNN,RNN) in both RMSE and MAPE. When compared with GRU,PREIG maintains good explainability while still performing well in prediction. By bridging domain knowledge, optimization theory and deep learning, PREIG provides a robust, interpretable, and scalable solution for high-dimensional nonlinear time series forecasting in economy.

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WATS: Calibrating Graph Neural Networks with Wavelet-Aware Temperature Scaling

Graph Neural Networks (GNNs) have demonstrated strong predictive performance on relational data; however, their confidence estimates often misalign with actual predictive correctness, posing significant limitations for deployment in safety-critical settings. While existing graph-aware calibration methods seek to mitigate this limitation, they primarily depend on coarse one-hop statistics, such as neighbor-predicted confidence, or latent node embeddings, thereby neglecting the fine-grained structural heterogeneity inherent in graph topology. In this work, we propose Wavelet-Aware Temperature Scaling (WATS), a post-hoc calibration framework that assigns node-specific temperatures based on tunable heat-kernel graph wavelet features. Specifically, WATS harnesses the scalability and topology sensitivity of graph wavelets to refine confidence estimates, all without necessitating model retraining or access to neighboring logits or predictions. Extensive evaluations across seven benchmark datasets with varying graph structures and two GNN backbones demonstrate that WATS achieves the lowest Expected Calibration Error (ECE) among all compared methods, outperforming both classical and graph-specific baselines by up to 42.3\% in ECE and reducing calibration variance by 17.24\% on average compared with graph-specific methods. Moreover, WATS remains computationally efficient, scaling well across graphs of diverse sizes and densities. Code will be released based on publication.

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