Searcharxiv⌕ Search

arXiv subjects

Kimon Fountoulakis

Publications and source records attributed to Kimon Fountoulakis.

At least 19 recordsLinked to original sources
arXiv2026

Learning to Execute Graph Algorithms Exactly with Graph Neural Networks

Understanding what graph neural networks can learn, especially their ability to learn to execute algorithms, remains a central theoretical challenge. In this work, we prove exact learnability results for graph algorithms under bounded-degree and finite-precision constraints. Our approach follows a two-step process. First, we train an ensemble of multi-layer perceptrons (MLPs) to execute the local instructions of a single node. Second, during inference, we use the trained MLP ensemble as the update function within a graph neural network (GNN). Leveraging Neural Tangent Kernel (NTK) theory, we show that local instructions can be learned from a small training set, enabling the complete graph algorithm to be executed during inference without error and with high probability. To illustrate the learning power of our setting, we establish a rigorous learnability result for the LOCAL model of distributed computation. We further demonstrate positive learnability results for widely studied algorithms such as message flooding, breadth-first and depth-first search, and Bellman-Ford.

cs.LG↗
arXiv2026

Certification from Examples is Hard for Circuits and Transformers under Minimal Overparametrization

As state-of-the-art neural networks are deployed on reasoning and algorithmic tasks, exactness guarantees become increasingly important. However, high average-case accuracy can still mask inconsistent behaviors. This motivates exact certification, which asks for the smallest set of labeled examples needed to certify that a learned hypothesis equals the target. We show that while some hypotheses are easy to certify, even minimal overparametrization can make certification exponentially hard across several hypothesis classes. For threshold circuits of depth $\ge 2$, adding a single extra gate can force certificate sizes exponential in the input dimension. We show an analogous hardness result for log-precision Transformers with only constant architectural overhead. We also characterize approximate certification, showing that allowing only polynomially many mistakes still requires exponentially large certificates, whereas constant relative-error guarantees can hide exponentially many mistakes. Empirically, we study certification for constructed circuits and trained Transformers for recognizing binary addition. While the constructed circuits instantiate the exponential barrier for certification, the trained Transformer analysis shows that imperfect models can evade detection by large uniformly sampled certificate candidates.

cs.LG↗
arXiv2026

Complexity of Classical Acceleration for $\ell_1$-Regularized PageRank

We study the degree-weighted work required to compute $\ell_1$-regularized PageRank using the standard accelerated proximal-gradient method (FISTA). For non-accelerated methods (ISTA), the best known worst-case work is $\widetilde{O}((αρ)^{-1})$, where $α$ is the teleportation parameter and $ρ$ is the $\ell_1$-regularization parameter. It is not known whether classical acceleration methods can improve $1/α$ to $1/\sqrtα$ while preserving the $1/ρ$ locality scaling, or whether they can be asymptotically worse. For FISTA, we show a negative result by constructing a family of instances for which standard FISTA is asymptotically worse than ISTA. On the positive side, we analyze FISTA on a slightly over-regularized objective and show that, under a confinement condition, all spurious activations remain inside a boundary set $\mathcal{B}$. This yields a bound consisting of an accelerated $(ρ\sqrtα)^{-1}\log(α/\varepsilon)$ term plus a boundary overhead $\sqrt{vol(\mathcal{B})}/(ρα^{3/2})$. We also provide graph-structural sufficient conditions that imply such confinement.

math.OC↗
arXiv2026

LVLM-COUNT: Enhancing the Counting Ability of Large Vision-Language Models

Counting is a fundamental operation for various real-world visual tasks, requiring both object recognition and robust counting capabilities. Despite their advanced visual perception, large vision-language models (LVLMs) are known to struggle with counting tasks. In this work, we evaluate the performance of several LVLMs on visual counting tasks across multiple counting and vision datasets. We observe that while their performance may be less prone to error for small numbers of objects, they exhibit significant weaknesses as the number of objects increases. To alleviate this issue, we propose a simple yet effective baseline method that enhances LVLMs' counting ability for large numbers of objects using a divide-and-conquer approach. Our method decomposes counting problems into sub-tasks. Moreover, it incorporates a mechanism to prevent objects from being split during division, which could otherwise lead to repetitive counting -- a common issue in a naive divide-and-conquer implementation. We demonstrate the effectiveness of this approach across various datasets and benchmarks, establishing it as a valuable reference for evaluating future solutions.

cs.CV↗
arXiv2026

Learning to Add, Multiply, and Execute Algorithmic Instructions Exactly with Neural Networks

Neural networks are known for their ability to approximate smooth functions, yet they fail to generalize perfectly to unseen inputs when trained on discrete operations. Such operations lie at the heart of algorithmic tasks such as arithmetic, which is often used as a test bed for algorithmic execution in neural networks. In this work, we ask: can neural networks learn to execute binary-encoded algorithmic instructions exactly? We use the Neural Tangent Kernel (NTK) framework to study the training dynamics of two-layer fully connected networks in the infinite-width limit and show how a sufficiently large ensemble of such models can be trained to execute exactly, with high probability, four fundamental tasks: binary permutations, binary addition, binary multiplication, and Subtract and Branch if Negative (SBN) instructions. Since SBN is Turing-complete, our framework extends to computable functions. We show how this can be efficiently achieved using only logarithmically many training data. Our approach relies on two techniques: structuring the training data to isolate bit-level rules, and controlling correlations in the NTK regime to align model predictions with the target algorithmic executions.

cs.LG↗
arXiv2025

On the Statistical Query Complexity of Learning Semiautomata: a Random Walk Approach

Semiautomata form a rich class of sequence-processing algorithms with applications in natural language processing, robotics, computational biology, and data mining. We establish the first Statistical Query hardness result for semiautomata under the uniform distribution over input words and initial states. We show that Statistical Query hardness can be established when both the alphabet size and input length are polynomial in the number of states. Unlike the case of deterministic finite automata, where hardness typically arises through the hardness of the language they recognize (e.g., parity), our result is derived solely from the internal state-transition structure of semiautomata. Our analysis reduces the task of distinguishing the final states of two semiautomata to studying the behavior of a random walk on the group $S_{N} \times S_{N}$. By applying tools from Fourier analysis and the representation theory of the symmetric group, we obtain tight spectral gap bounds, demonstrating that after a polynomial number of steps in the number of states, distinct semiautomata become nearly uncorrelated, yielding the desired hardness result.

cs.LG↗
arXiv2025

Positional Attention: Expressivity and Learnability of Algorithmic Computation

There is a growing interest in the ability of neural networks to execute algorithmic tasks (e.g., arithmetic, summary statistics, and sorting). The goal of this work is to better understand the role of attention in Transformers for algorithmic execution. Its importance for algorithmic execution has been studied theoretically and empirically using parallel computational models. Notably, many parallel algorithms communicate between processors solely using positional information. Inspired by this observation, we investigate how Transformers can execute algorithms using positional attention, where attention weights depend exclusively on positional encodings. We prove that Transformers with positional attention (positional Transformers) maintain the same expressivity of parallel computational models, incurring a logarithmic depth cost relative to the input length. We analyze their in-distribution learnability and explore how parameter norms in positional attention affect sample complexity. Our results show that positional Transformers introduce a learning trade-off: while they exhibit better theoretical dependence on parameter norms, certain tasks may require more layers, which can, in turn, increase sample complexity. Finally, we empirically explore the out-of-distribution performance of positional Transformers and find that they perform well in tasks where their underlying algorithmic solution relies on positional information.

cs.LG↗
arXiv2025

Optimality of Message-Passing Architectures for Sparse Graphs

We study the node classification problem on feature-decorated graphs in the sparse setting, i.e., when the expected degree of a node is $O(1)$ in the number of nodes, in the fixed-dimensional asymptotic regime, i.e., the dimension of the feature data is fixed while the number of nodes is large. Such graphs are typically known to be locally tree-like. We introduce a notion of Bayes optimality for node classification tasks, called asymptotic local Bayes optimality, and compute the optimal classifier according to this criterion for a fairly general statistical data model with arbitrary distributions of the node features and edge connectivity. The optimal classifier is implementable using a message-passing graph neural network architecture. We then compute the generalization error of this classifier and compare its performance against existing learning methods theoretically on a well-studied statistical model with naturally identifiable signal-to-noise ratios (SNRs) in the data. We find that the optimal message-passing architecture interpolates between a standard MLP in the regime of low graph signal and a typical convolution in the regime of high graph signal. Furthermore, we prove a corresponding non-asymptotic result.

cs.LG↗
arXiv2024

Analysis of Corrected Graph Convolutions

Machine learning for node classification on graphs is a prominent area driven by applications such as recommendation systems. State-of-the-art models often use multiple graph convolutions on the data, as empirical evidence suggests they can enhance performance. However, it has been shown empirically and theoretically, that too many graph convolutions can degrade performance significantly, a phenomenon known as oversmoothing. In this paper, we provide a rigorous theoretical analysis, based on the two-class contextual stochastic block model (CSBM), of the performance of vanilla graph convolution from which we remove the principal eigenvector to avoid oversmoothing. We perform a spectral analysis for $k$ rounds of corrected graph convolutions, and we provide results for partial and exact classification. For partial classification, we show that each round of convolution can reduce the misclassification error exponentially up to a saturation level, after which performance does not worsen. We also extend this analysis to the multi-class setting with features distributed according to a Gaussian mixture model. For exact classification, we show that the separability threshold can be improved exponentially up to $O({\log{n}}/{\log\log{n}})$ corrected convolutions.

cs.LG↗
arXiv2024

Simulation of Graph Algorithms with Looped Transformers

The execution of graph algorithms using neural networks has recently attracted significant interest due to promising empirical progress. This motivates further understanding of how neural networks can replicate reasoning steps with relational data. In this work, we study the ability of transformer networks to simulate algorithms on graphs from a theoretical perspective. The architecture we use is a looped transformer with extra attention heads that interact with the graph. We prove by construction that this architecture can simulate individual algorithms such as Dijkstra's shortest path, Breadth- and Depth-First Search, and Kosaraju's strongly connected components, as well as multiple algorithms simultaneously. The number of parameters in the networks does not increase with the input graph size, which implies that the networks can simulate the above algorithms for any graph. Despite this property, we show a limit to simulation in our solution due to finite precision. Finally, we show a Turing Completeness result with constant width when the extra attention heads are utilized.

cs.LG↗
arXiv2024

Local Graph Clustering with Noisy Labels

The growing interest in machine learning problems over graphs with additional node information such as texts, images, or labels has popularized methods that require the costly operation of processing the entire graph. Yet, little effort has been made to the development of fast local methods (i.e. without accessing the entire graph) that extract useful information from such data. To that end, we propose a study of local graph clustering using noisy node labels as a proxy for additional node information. In this setting, nodes receive initial binary labels based on cluster affiliation: 1 if they belong to the target cluster and 0 otherwise. Subsequently, a fraction of these labels is flipped. We investigate the benefits of incorporating noisy labels for local graph clustering. By constructing a weighted graph with such labels, we study the performance of graph diffusion-based local clustering method on both the original and the weighted graphs. From a theoretical perspective, we consider recovering an unknown target cluster with a single seed node in a random graph with independent noisy node labels. We provide sufficient conditions on the label noise under which, with high probability, using diffusion in the weighted graph yields a more accurate recovery of the target cluster. This approach proves more effective than using the given labels alone or using diffusion in the label-free original graph. Empirically, we show that reliable node labels can be obtained with just a few samples from an attributed graph. Moreover, utilizing these labels via diffusion in the weighted graph leads to significantly better local clustering performance across several real-world datasets, improving F1 scores by up to 13%.

cs.LG↗
arXiv2023

Weighted Flow Diffusion for Local Graph Clustering with Node Attributes: an Algorithm and Statistical Guarantees

Local graph clustering methods aim to detect small clusters in very large graphs without the need to process the whole graph. They are fundamental and scalable tools for a wide range of tasks such as local community detection, node ranking and node embedding. While prior work on local graph clustering mainly focuses on graphs without node attributes, modern real-world graph datasets typically come with node attributes that provide valuable additional information. We present a simple local graph clustering algorithm for graphs with node attributes, based on the idea of diffusing mass locally in the graph while accounting for both structural and attribute proximities. Using high-dimensional concentration results, we provide statistical guarantees on the performance of the algorithm for the recovery of a target cluster with a single seed node. We give conditions under which a target cluster generated from a fairly general contextual random graph model, which includes both the stochastic block model and the planted cluster model as special cases, can be fully recovered with bounded false positives. Empirically, we validate all theoretical claims using synthetic data, and we show that incorporating node attributes leads to superior local clustering performances using real-world graph datasets.

cs.SI↗
arXiv2023

Graph Attention Retrospective

Graph-based learning is a rapidly growing sub-field of machine learning with applications in social networks, citation networks, and bioinformatics. One of the most popular models is graph attention networks. They were introduced to allow a node to aggregate information from features of neighbor nodes in a non-uniform way, in contrast to simple graph convolution which does not distinguish the neighbors of a node. In this paper, we theoretically study the behaviour of graph attention networks. We prove multiple results on the performance of the graph attention mechanism for the problem of node classification for a contextual stochastic block model. Here, the node features are obtained from a mixture of Gaussians and the edges from a stochastic block model. We show that in an "easy" regime, where the distance between the means of the Gaussians is large enough, graph attention is able to distinguish inter-class from intra-class edges. Thus it maintains the weights of important edges and significantly reduces the weights of unimportant edges. Consequently, we show that this implies perfect node classification. In the "hard" regime, we show that every attention mechanism fails to distinguish intra-class from inter-class edges. In addition, we show that graph attention convolution cannot (almost) perfectly classify the nodes even if intra-class edges could be separated from inter-class edges. Beyond perfect node classification, we provide a positive result on graph attention's robustness against structural noise in the graph. In particular, our robustness result implies that graph attention can be strictly better than both the simple graph convolution and the best linear classifier of node features. We evaluate our theoretical results on synthetic and real-world data.

cs.LG↗
arXiv2022

On Classification Thresholds for Graph Attention with Edge Features

The recent years we have seen the rise of graph neural networks for prediction tasks on graphs. One of the dominant architectures is graph attention due to its ability to make predictions using weighted edge features and not only node features. In this paper we analyze, theoretically and empirically, graph attention networks and their ability of correctly labelling nodes in a classic classification task. More specifically, we study the performance of graph attention on the classic contextual stochastic block model (CSBM). In CSBM the nodes and edge features are obtained from a mixture of Gaussians and the edges from a stochastic block model. We consider a general graph attention mechanism that takes random edge features as input to determine the attention coefficients. We study two cases, in the first one, when the edge features are noisy, we prove that the majority of the attention coefficients are up to a constant uniform. This allows us to prove that graph attention with edge features is not better than simple graph convolution for achieving perfect node classification. Second, we prove that when the edge features are clean graph attention can distinguish intra- from inter-edges and this makes graph attention better than classic graph convolution.

cs.LG↗
arXiv2022

Effects of Graph Convolutions in Multi-layer Networks

Graph Convolutional Networks (GCNs) are one of the most popular architectures that are used to solve classification problems accompanied by graphical information. We present a rigorous theoretical understanding of the effects of graph convolutions in multi-layer networks. We study these effects through the node classification problem of a non-linearly separable Gaussian mixture model coupled with a stochastic block model. First, we show that a single graph convolution expands the regime of the distance between the means where multi-layer networks can classify the data by a factor of at least $1/\sqrt[4]{\mathbb{E}{\rm deg}}$, where $\mathbb{E}{\rm deg}$ denotes the expected degree of a node. Second, we show that with a slightly stronger graph density, two graph convolutions improve this factor to at least $1/\sqrt[4]{n}$, where $n$ is the number of nodes in the graph. Finally, we provide both theoretical and empirical insights into the performance of graph convolutions placed in different combinations among the layers of a network, concluding that the performance is mutually similar for all combinations of the placement. We present extensive experiments on both synthetic and real-world data that illustrate our results.

cs.LG↗
arXiv2022

Graph Convolution for Semi-Supervised Classification: Improved Linear Separability and Out-of-Distribution Generalization

Recently there has been increased interest in semi-supervised classification in the presence of graphical information. A new class of learning models has emerged that relies, at its most basic level, on classifying the data after first applying a graph convolution. To understand the merits of this approach, we study the classification of a mixture of Gaussians, where the data corresponds to the node attributes of a stochastic block model. We show that graph convolution extends the regime in which the data is linearly separable by a factor of roughly $1/\sqrt{D}$, where $D$ is the expected degree of a node, as compared to the mixture model data on its own. Furthermore, we find that the linear classifier obtained by minimizing the cross-entropy loss after the graph convolution generalizes to out-of-distribution data where the unseen data can have different intra- and inter-class edge probabilities from the training data.

cs.LG↗
arXiv2021

Targeted Pandemic Containment Through Identifying Local Contact Network Bottlenecks

Decision-making about pandemic mitigation often relies upon simulation modelling. Models of disease transmission through networks of contacts--between individuals or between population centres--are increasingly used for these purposes. Real-world contact networks are rich in structural features that influence infection transmission, such as tightly-knit local communities that are weakly connected to one another. In this paper, we propose a new flow-based edge-betweenness centrality method for detecting bottleneck edges that connect nodes in contact networks. In particular, we utilize convex optimization formulations based on the idea of diffusion with p-norm network flow. Using simulation models of COVID-19 transmission through real network data at both individual and county levels, we demonstrate that targeting bottleneck edges identified by the proposed method reduces the number of infected cases by up to 10% more than state-of-the-art edge-betweenness methods. Furthermore, the proposed method is orders of magnitude faster than existing methods.

cs.SI↗
arXiv2021

Local Hyper-Flow Diffusion

Recently, hypergraphs have attracted a lot of attention due to their ability to capture complex relations among entities. The insurgence of hypergraphs has resulted in data of increasing size and complexity that exhibit interesting small-scale and local structure, e.g., small-scale communities and localized node-ranking around a given set of seed nodes. Popular and principled ways to capture the local structure are the local hypergraph clustering problem and related seed set expansion problem. In this work, we propose the first local diffusion method that achieves edge-size-independent Cheeger-type guarantee for the problem of local hypergraph clustering while applying to a rich class of higher-order relations that covers many previously studied special cases. Our method is based on a primal-dual optimization formulation where the primal problem has a natural network flow interpretation, and the dual problem has a cut-based interpretation using the $\ell_2$-norm penalty on associated cut-costs. We demonstrate the new technique is significantly better than state-of-the-art methods on both synthetic and real-world data.

cs.LG↗