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Lei Li

Publications and source records attributed to Lei Li.

At least 91 records · Page 5Linked to original sources

Querying Cohesive Subgraph regarding Span-Constrained Triangles on Temporal Graphs with Dynamic Index Maintenance

Recent advances in temporal graph research have redefined traditional static graph concepts such as triangles, motifs, and $k$-cores. Inspired by this, we introduce a novel $(k,δ)$-truss for temporal graphs, requiring triangles to exist within sufficiently short time windows. The $(k,δ)$-truss ensures both static and temporal cohesion, while the original $k$-truss is a special case when $δ= \infty$. To address $(k,δ)$-truss queries, we propose index-free and index-based approaches. Utilizing the dual containment relation of $(k,δ)$-trusses, our indexes losslessly compress all $(k,δ)$-trusses into map or tree structures, significantly reducing space while enabling optimal-time retrieval. To scale to large temporal graphs, we develop two index construction algorithms based on truss decomposition and truss maintenance, respectively, which substantially reduce redundant computations. Moreover, we present techniques for the dynamic maintenance of the proposed indexes. The experimental results demonstrate that index-based approaches process queries in interactive time and outperform the index-free approach by 2$\sim$4 orders of magnitude, while the indexes achieve compression ratios of up to $10^{-4}$ and can be updated efficiently without rebuilding from scratch.

cs.DB↗

Probabilistic Win Ratio Method For Hierarchical Composite Endpoints With Coarsened Outcomes

The win ratio is increasingly used to analyze prioritized composite endpoints in clinical trials, but standard implementations rely on deterministic pairwise comparisons and can perform poorly in the presence of censoring and endpoint-specific missingness. In such settings, unresolved comparisons are often treated as ties, leading to loss of efficiency and potentially biased inference, particularly when lower-priority outcomes are incompletely observed. We propose the probabilistic win ratio (PWR), a framework for estimating the classical win ratio under coarsened observation. The PWR replaces deterministic pairwise decisions with conditional probabilities of win, loss, or tie given the observed data, allowing partially observed comparisons to contribute fractionally while being explicitly penalized according to their uncertainty. Comparisons with greater coarsening receive smaller effective weight, whereas fully observed comparisons contribute as in the classical analysis, preserving the clinical priority structure. When outcomes are fully observed, the PWR reduces exactly to the standard win ratio estimator. Simulation studies show that the PWR maintains low bias and mean squared error across a range of censoring and missingness scenarios. Two clinical trial case studies illustrate complementary data regimes, demonstrating calibration in near-complete data and stability under substantial right censoring.

stat.ME↗

Improving Multimodal Reasoning via Worst Dimension Optimization

Multimodal reasoning requires a path that retains integrity over a wide range of constraints, from visual grounding to logic consistency. However, the current Process Reward Models focus on heuristically defined rewards that equally weigh these factors, which may lead to the concealment of individual dimension failures by the dominating factors, without guaranteeing the validity of the reasoning process in general.

cs.AI↗

Personalized 3D Myocardial Infarct Geometry Reconstruction from Cine MRI for Cardiac Digital Twins

Accurate 3D geometric characterization of myocardial infarction (MI) is essential for building cardiac digital twins (CDTs) to precisely simulate infarct-related electrophysiology. Late gadolinium enhancement magnetic resonance imaging (LGE MRI) is the clinical reference for locating MI, yet its reliance on contrast agents restricts use in renally impaired patients and limits longitudinal follow-ups. As an alternative, contrast-free cine MRI visualizes abnormal ventricular wall motion, which is highly indicative of the infarcted area. In this study, we propose a novel explicit geometry-motion embedded model to fully automatically reconstruct personalized, simulation-ready 3D MI geometries directly from multi-view cine MRIs. Specifically, we construct a 4D (3D + t) biventricular mesh to explicitly extract and decouple geometry-aware and motion-aware features. We further design a dual-branch module for adaptive geometry-motion fusion to capture spatiotemporal dependencies for mapping infarcted region. Furthermore, we introduce multi-scale supervision utilizing an AHA-17 segment-guided cross-attention mechanism to steer the prediction, ensuring biophysically consistent reconstruction. Experimental results on 225 cine MRIs demonstrated that the proposed 3D MI reconstruction achieved high performance with an average Dice score of 0.678 $\pm$ 0.011. In the downstream in-silico electrophysiological simulation evaluations, the results were highly consistent with the LGE-derived ground truth, highlighting the great potential of the proposed model for contrast-free scar characterization and seamless integration into CDT modeling. The code will be released publicly upon acceptance of the manuscript for publication.

cs.CV↗

CRAB-Bench: Evaluating LLM Agents under Complex Task Dependencies and Human-aligned User Simulation

Evaluating LLM agents in realistic service scenarios requires complex task dependencies, imperfect user behavior, and an evaluation that accommodates multiple valid solutions. We introduce CRAB-Bench (Constraint-based Realistic Agent Benchmark) and RUSE (Realistic User Simulation Engine) to address this gap. CRAB-Bench generates tasks via a constraint graph over multiple interdependent entities with structured distractors, requiring agents to reason carefully over thousands of misleading candidates where only a tiny fraction of solutions are valid. RUSE replaces cooperative, template-like simulators with realistic users grounded in human behavioral studies, instantiated across diverse personas and four behavioral dimensions. Experiments on four frontier LLM agents show that the best model achieves only 61% pass@1 on CRAB-Bench, and switching to RUSE causes further drops of up to 57%, concentrated in task-solving ability rather than conversational quality. Information Disclosure is the most damaging behavioral dimension, and agents interacting with RUSE are less likely to admit mistakes, instead masking errors through implicit corrections.

cs.CL↗

FlowSDR: Sufficient Dimension Reduction via Conditional Normalizing Flows

Sufficient dimension reduction (SDR) seeks a low-dimensional linear projection of predictors that preserves the conditional distribution of the response. Existing methods target this conditional distribution indirectly, via inverse moments, local forward regression, or neural ensemble regression. We propose FlowSDR, a likelihood-based framework that jointly learns the projection and the conditional density by maximizing a conditional log-likelihood, with the density parameterized by monotone rational-quadratic spline flows. The estimator is Fisher consistent under the SDR model, and its sample objective admits a population interpretation in terms of mutual information. As a complementary model within the same likelihood framework, we introduce the neural Gaussian SDR, a heteroscedastic conditional Gaussian model whose mean and variance are parameterized by shared neural-network functions of the projected predictors. In simulations spanning Gaussian errors, heavy-tailed distributions, two-component mixtures, and settings with tail behavior not captured by mean-variance structure, FlowSDR recovers the central subspace more accurately than existing SDR methods and the neural Gaussian SDR baseline. We further validate these advantages on a face-age prediction task using the UTKFace dataset.

stat.ME↗

How Far Has AI Come in Liver Fibrosis Staging? A Large-Scale Real-World Dataset and Benchmark

Despite years of methodological progress, how far AI has come in liver fibrosis staging has never been systematically evaluated under the heterogeneous, multi-center conditions that define clinical practice. To address this gap, we introduce LiFS, a large-scale dataset and benchmark derived from the MICCAI 2025 CARE-Liver challenge, comprising 610 patients across multiple centers and scanners with multi-sequence MRI. To the best of our knowledge, LiFS is the first benchmark providing complete gadoxetic acid-enhanced sequences with histopathology-confirmed annotations from diverse real-world scanners. Through systematic evaluation of 9 independently developed methods selected from 96 registered teams against in-cohort radiologist reference results, our findings address how far current AI has progressed toward clinical-level liver fibrosis staging from three complementary perspectives. First, against radiologists, the best AI methods were broadly comparable to the senior radiologist and significantly exceeded the junior radiologist in selected settings, while median AI performance generally approached junior-radiologist levels. Second, from a data perspective, cross-center heterogeneity, label imbalance, and contrast-enhanced sequence variability emerge as the dominant challenges for AI methods. Third, from a technical perspective, methodological design choices, including spatial registration, input dimensionality, multi-modal fusion strategy, and backbone architecture, appear to modulate cross-center robustness, although no single choice alone closes the gap. Overall, LiFS provides a rigorous real-world benchmark for positioning the current state of AI in liver fibrosis staging and for enabling future research on the key challenges that limit clinically reliable deployment.

cs.CV↗

X-Edit: Exact, Explicit, and Explainable Null-Space Editing for Medical Vision Transformers

Pre-trained Vision Transformers (ViTs) are increasingly deployed for medical image classification. However, correcting their inevitable failure cases in dynamic clinical scenarios poses a critical challenge. Conventional fine-tuning approaches inherently suffer from catastrophic forgetting, severely degrading previously acquired diagnostic capabilities. Such instability fundamentally compromises clinical safety. Addressing this vulnerability requires an active, controllable, and reliable intervention mechanism that is both theoretically grounded and inherently interpretable. To this end, we propose X-Edit (eXact, eXplicit, and eXplainable Editing), an efficient null-space model editing framework. X-Edit transitions the editing process from iterative gradient-based optimization to a theoretically grounded, closed-form solution. Specifically, we first explicitly localize the influential layers via causal tracing governing the erroneous prediction. Subsequently, we construct an orthogonal null-space projection matrix from a curated anchor set. By geometrically constraining the exact parameter update strictly within this null space, we provide mathematical guarantees that the intervention rectifies targeted errors without perturbing established diagnostic representations. Extensive evaluations on six medical imaging benchmarks demonstrate that X-Edit comprehensively suppresses catastrophic forgetting while achieving superior edit success rates. Our code is available at https://github.com/HenryLau7/X-Edit.

cs.CV↗

Physiology and Anatomy Aware Inverse Inference of Myocardial Infarction for Cardiac Digital Twin

Accurate localization of myocardial infarction is essential for risk stratification. While LGE-MRI remains the gold standard, it is resource-intensive. Integrating cine MRI with ECG enables a more detailed representation of infarct properties. Existing inverse MI inference methods overlook realistic scar morphology and cardiac repolarization, reducing sensitivity to subtle ECG variations and interpretability of infarct-induced electrophysiological changes. In this paper, we propose a novel framework for noninvasive MI localization using cardiac digital twins. To bridge the domain gap between simulation and reality, we introduce an anatomy-aware stochastic infarct synthesis strategy to synthesize realistic, irregular scars with border zones, mimicking ischemic transmural progression. We then construct a virtual cohort to simulate QRS-T waveforms, capturing both depolarization and repolarization dynamics. Furthermore, we design a Physiology and Anatomy Aware Network (PAA-Net) that jointly encodes 3D myocardial geometry and multi-lead ECGs to infer infarct areas with varying localizations, sizes, spatial extents, and transmuralities. Experimental results demonstrate that our framework significantly outperforms existing methods in inverse inference, achieving Dice scores of 0.7391 and 0.5503 for scar and border zone segmentation, respectively, while further enhancing the interpretability of the ECG-infarct relationship. Our code will be released upon acceptance.

cs.CV↗

Echo4DIR: 4D Implicit Heart Reconstruction from 2D Echocardiography Videos

Reconstructing 4D (3D+t) cardiac geometry from sparse 2D echocardiography is highly desirable yet fundamentally challenged by geometric ambiguity and temporal discontinuity. To tackle these issues, we propose Echo4DIR, a novel test-time 4D implicit reconstruction framework. Specifically, we learn robust 3D shape priors from statistical shape models (SSMs) via a cardiac conditional SDF, constructing an Epipolar Mask Encoder module with epipolar cross attention to effectively fuse multi-view features. To bridge the synthetic-to-real domain gap, we introduce a self-supervised SDF-tailored differentiable rendering strategy for patient-specific 3D shape adaptation using uncalibrated clinical masks without requiring 3D ground truth. Crucially, the inherent continuity of implicit representation overcomes sparse observations, enabling anatomically reliable geometry at arbitrary resolutions. Furthermore, to empower our framework with physically continuous 4D extension, we introduce a Radial SDF Alignment strategy that strictly locks shape evolution to the predicted velocity field, fundamentally eliminating mesh drift. Extensive experiments on synthetic benchmarks and real clinical datasets demonstrate that Echo4DIR achieves state-of-the-art 4D cardiac mesh reconstruction, notably yielding an impressive clinical overlap of up to 98.35% Dice and 96.75% IoU.

cs.CV↗

InteractScience: Programmatic and Visually-Grounded Evaluation of Interactive Scientific Demonstration Code Generation

Large Language Models (LLMs) are increasingly capable of generating complete applications from natural language instructions, creating new opportunities in science and education. In these domains, interactive scientific demonstrations are particularly valuable for explaining concepts, supporting new teaching methods, and presenting research findings. Generating such demonstrations requires models to combine accurate scientific knowledge with the ability to implement interactive front-end code that behaves correctly and responds to user actions. This capability goes beyond the scope of existing benchmarks, which typically evaluate either knowledge question answering without grounding in code or static web code generation without scientific interactivity. To evaluate this integrated ability, we design a hybrid framework that combines programmatic functional testing to rigorously verify interaction logic with visually-grounded qualitative testing to assess rendered outputs against reference snapshots. Building on this framework, we present InteractScience, a benchmark consisting of a substantial set of carefully designed questions across five scientific domains, each paired with unit tests, reference snapshots, and checklists. We evaluate 30 leading open- and closed-source LLMs and report results that highlight ongoing weaknesses in integrating domain knowledge with interactive front-end coding. Our work positions InteractScience as the first benchmark to automatically measure this combined capability with realistic interactive operations, providing a foundation for advancing reliable and educationally useful scientific demonstration code generation. All code and data are publicly available at https://github.com/open-compass/InteractScience.

cs.SE↗

JanusCoder: Towards a Foundational Visual-Programmatic Interface for Code Intelligence

The scope of neural code intelligence is rapidly expanding beyond text-based source code to encompass the rich visual outputs that programs generate. This visual dimension is critical for advanced applications like flexible content generation and precise, program-driven editing of visualizations. However, progress has been impeded by the scarcity of high-quality multimodal code data, a bottleneck stemming from challenges in synthesis and quality assessment. To address these challenges, we make contributions from both a data and modeling perspective. We first introduce a complete synthesis toolkit that leverages reciprocal synergies between data modalities to efficiently produce a large-scale, high-quality corpus spanning from standard charts to complex interactive web UIs and code-driven animations. Leveraging this toolkit, we construct JanusCode-800K, the largest multimodal code corpus to date. This powers the training of our models, JanusCoder and JanusCoderV, which establish a visual-programmatic interface for generating code from textual instructions, visual inputs, or a combination of both. Our unified model is a departure from existing approaches that build specialized models for isolated tasks. Extensive experiments on both text-centric and vision-centric coding tasks demonstrate the superior performance of the JanusCoder series, with our 7B to 14B scale models approaching or even exceeding the performance of commercial models. Furthermore, extensive analysis provides key insights into harmonizing programmatic logic with its visual expression. Our code and checkpoints are available at https://github.com/InternLM/JanusCoder.

cs.AI↗

RePCM: Region-Specific and Phenotype-Adaptive Bi-Ventricular Cardiac Motion Synthesis

Cardiac motion over a cardiac cycle is crucial for quantifying regional function and is strongly affected by cardiovascular diseases. Since temporally dense mesh sequences are difficult to obtain in practice, we focus on leveraging the more accessible end-diastolic frame to infer a full-cycle sequence. Due to strong regional and disease-specific differences, traditional methods often oversmooth the data by relying on generative models that are optimized for global patterns. To address this problem, we propose Region-Aware and Phenotype-Adaptive Bi-Ventricular Cardiac Motion Synthesis (RePCM) for single frame Bi-ventricular mesh motion completion. In Stage I, a reconstruction network learns vertex wise motion descriptors and clustering yields a data driven functional partition, providing an explicit motion derived region structure. In Stage II, a Region-Specific Injection Module enforces masked, synchronized region exchange within a conditional VAE, preserving localized specific dynamics and restricting cross-region mixing. A Phenotype-Adaptive Mixture-of-Experts prior conditioned on ED shape uses anatomy-guided cues to model latent motion trends and capture inter-disease variability. Experiments on three datasets covering different cardiovascular diseases show consistent gains in geometric and functional metrics and improved preservation of region specific dynamics.

cs.CV↗

Unconventional Magnetism: Symmetry Classification, Hybrid-parity and Unconstrained-parity Classes

Unconventional magnetism has emerged as a transformative frontier in condensed matter physics. Such phases are characterized by substantial non-relativistic spin splitting (NSS) in symmetry-compensated magnets. They have been classified by the parity of their spin textures under momentum inversion, leading to the paradigms of altermagnets (even-parity) and odd-parity magnets. However, the full symmetry landscape remains largely unexplored. In this Letter, we present a systematic classification framework for unconventional magnetism based on the representation theory of the spin textures and the associated parity properties. Within this framework, we predict two previously unidentified classes beyond the established pure-parity categories: hybrid-parity magnets (HPMs) and unconstrained-parity magnets (UPMs), where the spin textures exhibit contrasting parities among their Cartesian components and the parity of the spin textures is ill-defined, respectively. We derive universal symmetry criteria that categorize HPMs into three distinct types. Importantly, by combining the spin splitting characteristics of altermagnets and odd-parity magnets, HPMs can enable the coexistence of the spin current and Edelstein effects. Taking FePO4 as an example, we perform first-principles calculations to demonstrate this coexistence. Finally, we discuss the potential applications of HPMs in spintronic devices. Our work provides a comprehensive symmetry classification of unconventional magnetism and establishes HPMs as a promising platform for multi-functional spintronics.

cond-mat.mtrl-sci↗

Sem-Detect: Semantic Level Detection of AI Generated Peer-Reviews

How can we distinguish whether a peer review was written by a human or generated by an AI model? We argue that, in this setting, authorship should not be attributed solely from the textual features of a review, but also from the ideas, judgments, and claims it expresses. To this end, we propose Sem-Detect, an authorship detection method for peer reviews that operationalizes this principle by combining textual features with claim-level semantic analysis. Sem-Detect compares a target review against multiple AI-generated reviews of the same paper, leveraging the observation that different AI models tend to converge on similar points, while human reviewers introduce more unique and diverse ones. As a result, Sem-Detect is able to distinguish fully AI reviews from authentic human-written ones, including those that have been refined using an LLM but still reflect human judgment. Across a dataset of over 20,000 peer reviews from ICLR and NeurIPS conferences, Sem-Detect improves over the strongest baseline by 25.5% in TPR@0.1% FPR in the binary setting. Moreover, in the three-class scenario, we empirically show that LLM refinement preserves the semantic signals of human reviews, which remain distinct from the patterns exhibited by fully AI-generated text; as a result, fewer than 3.5% of LLM-refined human reviews are misclassified as AI-generated.

cs.CL↗

HOI-PAGE: Zero-Shot Human-Object Interaction Generation with Part Affordance Guidance

We present HOI-PAGE, a new approach that prioritizes part-level affordance reasoning to generate high-fidelity 4D human-object interactions (HOIs) from text prompts in a zero-shot fashion. In contrast to prior works that focus on global, whole body-object motion synthesis, our approach explicitly reasons about the underlying part-level mechanics of interactions using large language models (LLMs). We capture this reasoning in a structured part affordance graph (PAG) representation, serving as a high-level interaction scaffolding to guide a three-stage synthesis: first, decomposing input 3D objects into semantic parts; then, generating reference HOI videos from text prompts to extract part-based motion constraints; and finally, optimizing for 4D HOI motion sequences that mimic the reference dynamics while satisfying part-level contact constraints. Extensive experiments show that our approach is flexible and capable of generating complex multi-object or multi-person interaction sequences, with significantly improved realism and text alignment for zero-shot 4D HOI generation.

cs.GR↗

Investigating Cross-Modal Skill Injection: Scenarios, Methods, and Hyperparameters

Vision-Language Models (VLMs) have demonstrated remarkable proficiency in general multi-modal understanding; yet they struggle to efficiently acquire continually evolving domain-specific skills. Conventional approaches to enhancing VLM capabilities, such as Supervised Fine-Tuning (SFT), require extensive dataset curation and substantial computational resources. Model merging has emerged as an efficient alternative that enables the transfer of domain-specific expertise from Large Language Models (LLMs) to VLMs without incurring additional training data requirements or significant computational overhead. Unlike conventional merging of homogeneous LLMs, which mainly aggregates existing capabilities, cross-modal skill injection aims to induce emergent cross-modal capabilities by integrating a domain-expert LLM into a VLM. However, existing research lacks a systematic analysis of the applicability and methodology of cross-modal skill injection. In this study, we investigate cross-modal skill injection across three main aspects: scenarios, methods, and hyperparameters. For scenarios, we find that cross-modal skill injection generally performs well in instruction-following and cross-lingual settings, yet struggles with mathematical reasoning. For methods, we find that classic approaches such as TA and DARE consistently achieve superior performance over alternative merging methods. We also provide a systematic and quantitative analysis of the hyperparameter tuning that these classic methods critically depend on.

cs.CL↗

RefiningGPT: Specialized language Models for Automated Refinery Unit-level Process Diagram Synthesis

Applying LLMs to complex industrial processes remains challenging due to the semantic gap between natural language design intents and the rigorous physical logic of engineering. In the field of petroleum refining engineering, a critical bottleneck is the automated synthesis of Unit-level Process Diagrams (UPDs), which serve as the topological bridge connecting abstract requirements to concrete unit operations. In this paper, we propose RefineGPT, a domain-specialized agent for autonomous refinery design.RefineGPT adopts a hierarchical architecture in which a supervised fine-tuned small language model is responsible for selecting units that satisfy design requirements, while a large language model is used to connect these units to generate the final topology. To enable supervised training, we develop a pipeline that extracts latent process motifs from noisy, unstructured legacy topologies and synthesizes high-quality rationale-based Chain-of-Thought (CoT) training data. Empirical validation demonstrates that RefineGPT achieves substantial improvements in topological consistency and chemical engineering feasibility, establishing a high-fidelity pathway for AI-augmented industrial process synthesis.

cs.CE↗