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Liang Tian

Publications and source records attributed to Liang Tian.

At least 19 recordsLinked to original sources

Non-synchronism in Global Usage of Research Methods in Library and Information Science from 1990 to 2019

The global development of Library and Information Science (LIS) is influenced by various factors such as the economy, society, culture, discipline, tradition, and more. Consequently, the research methods of LIS vary greatly among countries. To better understand these differences, we conducted a study of 5,281 research papers from 81 countries published in internationally representative journals over the past thirty years. We manually annotated the research methods used in some articles through content analysis, and subsequently developed and trained a deep learning model for automatic classification of research methods. Using this method, we conducted a comparative analysis of the usage of research methods in different countries. Our findings reveal that there are differences in the research methods used across countries, with each country having its unique research profile and distribution of research methods. Even when investigating the same topic, research methods can differ between countries. Our study also uncovers that there are differences between the national and international distribution of research methods, these differences have decreased over the past 30 years. By highlighting the characteristics of discipline development in various countries from the perspective of research methods, our study can help guide discipline development at the national level. This study provides insights into the usage trends of research methods across different countries and highlights the unique characteristics of discipline development in each country. This information can be valuable in promoting collaboration and understanding between countries and in guiding discipline development at the national level.

cs.DL

Gender Differences in Research Topic and Method Selection in Library and Information Science: Perspectives from Three Top Journals

Research in the social sciences has shown that there are gender differences in the selection of research methods, with women often opting for qualitative methods while men prefer quantitative methods. However, it is important to consider that research methods are generally chosen based on the research topic. To figure out the influence of gender on research method selection, a study was conducted in the field of Library and Information Science, using a more fine-grained method classification system and an automatic classification model called CogFT, which is based on full-text cognition. The findings showed that women tend to use Interview while men prefer Theoretical approach, across a range of topics. The study offers insights into the specific research design processes that contribute to gender differences in method selection and suggests ways to promoting gender inclusivity and equality in academia by considering research method use and guidance.

cs.DL

When is vaccine prioritization worth optimizing?

Optimizing vaccine prioritization is often treated as the default policy response when vaccine supply is limited. Yet optimized prioritization carries administrative, ethical and communication costs, motivating an upstream question: whether differences among vaccine allocations can alter epidemic outcomes enough to make optimization epidemiologically necessary. We show that optimization is not always worth pursuing: in some regimes, vaccination markedly reduces epidemic burden, but many feasible allocation rules perform almost equally well, making the necessity of optimization low. We quantify this necessity as the range of epidemic outcomes generated by different allocations under fixed supply and show that it is governed by competition between vaccinating high-contact groups to slow transmission and vaccinating groups that benefit most directly: necessity is low when these protection routes are balanced and high when one dominates. Increasing transmission intensity changes this balance and drives a transition in the optimal allocation from transmission-focused prioritization toward direct protection. Different prevention objectives exhibit distinct transition thresholds, creating regimes in which optimizing one objective substantially compromises another, thereby revealing when the choice of prevention target matters most. This framework reframes vaccine prioritization as a prior decision problem, identifying when optimization is warranted, when simpler rules suffice, and when prevention goals conflict.

physics.bio-ph

Usage frequency and application variety of research methods in library and information science: Continuous investigation from 1991 to 2021

The present study analyzed over 26,000 research articles published between 1991 and 2021 in twenty-one major LIS (Library and Information Science) journals, using the machine learning (ML) approach to categorize the research methods used by LIS scholars. The findings of this study are significant. Firstly, there has been a shift in the research strategy from conceptual research (e.g., "Theoretical approach") to empirical research (e.g., "Interview") in LIS investigations over the past 31 years. Secondly, the research topics explored by LIS scholars during this period have moved from system-centered issues (e.g., "Information retrieval/models and algorithms") to user-centered topics (e.g., "Information services "). Thirdly, the study revealed dynamic and revealing relationships between the 18 research topics identified in the study and the 16 research methods commonly adopted in the LIS field. These dynamic relationships can be visualized by year and longitudinally via an interactive map created in this study.

cs.DL

TwinRouterBench: Fast Static and Live Dynamic Evaluation for Realistic Agentic LLM Routing

LLM routing matters most in long-horizon applications such as coding agents, deep research systems, and computer-use agents, where a single user request triggers many model calls. Routing each call to the cheapest sufficient model can cut costs without sacrificing quality, yet existing router benchmarks evaluate routers only on one-shot prompts. They never expose the router-visible prefix at an intermediate agent step, never test whether a cheaper replacement preserves downstream task success, and often rely on online LLM judges at evaluation time. We introduce TwinRouterBench, a step-level routing benchmark with two tracks. The static track provides 970 router-visible prefixes from 520 instances across SWE-bench, BFCL, mtRAG, QMSum, and PinchBench, each paired with an execution-verified target tier estimated under a released downgrade-and-cascade protocol; scoring is deterministic arithmetic over tier labels, trajectory membership, and token costs, with no online evaluator-side LLM judge. The dynamic track supplies a harness that runs routers on the full 500-case SWE-bench Verified suite; in this paper we report a 100-case held-out evaluation disjoint from the static SWE supervision split. At each LLM call the router selects a concrete model from a locked pool, and success is measured by official task resolution and realized API spend. The two tracks support fast offline iteration followed by end-to-end validation under live agent execution. Code and data are available at https://github.com/CommonstackAI/TwinRouterBench.

cs.LG

Dynamic Vaccine Prioritization via Non-Markovian Final-state Optimization

Effective vaccine prioritization is critical for epidemic control, yet real outbreaks exhibit memory effects that inflate state space and make long-term prediction and optimization challenging. As a result, many strategies are tuned to short-term objectives and overlook how vaccinating certain individuals indirectly protects others. We develop a general age-stratified non-Markovian epidemic model that captures memory dynamics and accommodates diverse epidemic models within one framework via state aggregation. Building on this, we map non-Markovian final states to an equivalent Markovian representation, enabling real-time fast direct prediction of long-term epidemic outcomes under vaccination. Leveraging this mapping, we design a dynamic prioritization strategy that continually allocates doses to minimize the predicted long-term final epidemic burden, explicitly balancing indirect transmission blocking with the direct protection of important groups and outperforming static policies and those short-term heuristics that target only immediate direct effects. We further uncover the underlying mechanism that drives shifts in vaccine prioritization as the epidemic progresses and coverage accumulates, underscoring the importance of adaptive allocations. This study renders long-term prediction tractable in systems with memory and provides actionable guidance for optimal vaccine deployment.

physics.bio-ph

An Interpretable AI framework Quantifying Traditional Chinese Medicine Principles Towards Enhancing and Integrating with Modern Biomedicine

Traditional Chinese Medicine diagnosis and treatment principles, established through centuries of trial-and-error clinical practice, directly maps patient-specific symptom patterns to personalised herbal therapies. These empirical holistic mapping principles offer valuable strategies to address remaining challenges of reductionism methodologies in modern biomedicine. However, the lack of a quantitative framework and molecular-level evidence has limited their interpretability and reliability. Here, we present an AI framework trained on ancient and classical TCM formula records to quantify the symptom pattern-herbal therapy mappings. Interestingly, we find that empirical TCM diagnosis and treatment are consistent with the encoding-decoding processes in the AI model. This enables us to construct an interpretable TCM embedding space (TCM-ES) using the model's quantitative representation of TCM principles. Validated through broad and extensive TCM patient data, the TCM-ES offers universal quantification of the TCM practice and therapeutic efficacy. We further map biomedical entities into the TCM-ES through correspondence alignment. We find that the principal directions of the TCM-ES are significantly associated with key biological functions (such as metabolism, immune, and homeostasis), and that the disease and herb embedding proximity aligns with their genetic relationships in the human protein interactome, which demonstrate the biological significance of TCM principles. Moreover, the TCM-ES uncovers latent disease relationships, and provides alternative metric to assess clinical efficacy for modern disease-drug pairs. Finally, we construct a comprehensive and integrative TCM knowledge graph, which predicts potential associations between diseases and targets, drugs, herbal compounds, and herbal therapies, providing TCM-informed opportunities for disease analysis and drug development.

q-bio.OT

SolarDesign: An Online Photovoltaic Device Simulation and Design Platform

SolarDesign (https://solardesign.cn/) is an online photovoltaic device simulation and design platform that provides engineering modeling analysis for crystalline silicon solar cells, as well as emerging high-efficiency solar cells such as organic, perovskite, and tandem cells. The platform offers user-updatable libraries of basic photovoltaic materials and devices, device-level multi-physics simulations involving optical-electrical-thermal interactions, and circuit-level compact model simulations based on detailed balance theory. Employing internationally advanced numerical methods, the platform accurately, rapidly, and efficiently solves optical absorption, electrical transport, and compact circuit models. It achieves multi-level photovoltaic simulation technology from ``materials to devices to circuits'' with fully independent intellectual property rights. Compared to commercial software, the platform achieves high accuracy and improves speed by more than an order of magnitude. Additionally, it can simulate unique electrical transport processes in emerging solar cells, such as quantum tunneling, exciton dissociation, and ion migration.

physics.optics

Microbiome-derived bile acids contribute to elevated antigenic response and bone erosion in rheumatoid arthritis

Rheumatoid arthritis (RA) is a chronic, disabling and incurable autoimmune disease. It has been widely recognized that gut microbial dysbiosis is an important contributor to the pathogenesis of RA, although distinct alterations in microbiota have been associated with this disease. Yet, the metabolites that mediate the impacts of the gut microbiome on RA are less well understood. Here, with microbial profiling and non-targeted metabolomics, we revealed profound yet diverse perturbation of the gut microbiome and metabolome in RA patients in a discovery set. In the Bacteroides-dominated RA patients, differentiation of gut microbiome resulted in distinct bile acid profiles compared to healthy subjects. Predominated Bacteroides species expressing BSH and 7a-HSDH increased, leading to elevated secondary bile acid production in this subgroup of RA patients. Reduced serum fibroblast growth factor-19 and dysregulated bile acids were evidence of impaired farnesoid X receptor-mediated signaling in the patients. This gut microbiota-bile acid axis was correlated to ACPA. The patients from the validation sets demonstrated that ACPA-positive patients have more abundant bacteria expressing BSH and 7a-HSDH but less Clostridium scindens expressing 7a-dehydroxylation enzymes, together with dysregulated microbial bile acid metabolism and more severe bone erosion than ACPA-negative ones. Mediation analyses revealed putative causal relationships between the gut microbiome, bile acids, and ACPA-positive RA, supporting a potential causal effect of Bacteroides species in increasing levels of ACPA and bone erosion mediated via disturbing bile acid metabolism. These results provide insights into the role of gut dysbiosis in RA in a manifestation-specific manner, as well as the functions of bile acids in this gut-joint axis, which may be a potential intervention target for precisely controlling RA conditions.

physics.bio-ph

Validity of Markovian modeling for transient memory-dependent epidemic dynamics

The initial transient phase of an emerging epidemic is of critical importance for data-driven model building, model-based prediction of the epidemic trend, and articulation of control/prevention strategies. In principle, quantitative models for real-world epidemics need to be memory-dependent or non-Markovian, but this presents difficulties for data collection, parameter estimation, computation and analyses. In contrast, the difficulties do not arise in the traditional Markovian models. To uncover the conditions under which Markovian and non-Markovian models are equivalent for transient epidemic dynamics is outstanding and of significant current interest. We develop a comprehensive computational and analytic framework to establish that the transient-state equivalence holds when the average generation time matches and average removal time, resulting in minimal Markovian estimation errors in the basic reproduction number, epidemic forecasting, and evaluation of control strategy. Strikingly, the errors depend on the generation-to-removal time ratio but not on the specific values and distributions of these times, and this universality will further facilitate estimation rectification. Overall, our study provides a general criterion for modeling memory-dependent processes using the Markovian frameworks.

physics.soc-ph

Using Hashtags to Analyze Purpose and Technology Application of Open-Source Project Related to COVID-19

COVID-19 has had a profound impact on the lives of all human beings. Emerging technologies have made significant contributions to the fight against the pandemic. An extensive review of the application of technology will help facilitate future research and technology development to provide better solutions for future pandemics. In contrast to the extensive surveys of academic communities that have already been conducted, this study explores the IT community of practice. Using GitHub as the study target, we analyzed the main functionalities of the projects submitted during the pandemic. This study examines trends in projects with different functionalities and the relationship between functionalities and technologies. The study results show an imbalance in the number of projects with varying functionalities in the GitHub community, i.e., applications account for more than half of the projects. In contrast, other data analysis and AI projects account for a smaller share. This differs significantly from the survey of the academic community, where the findings focus more on cutting-edge technologies while projects in the community of practice use more mature technologies. The spontaneous behavior of developers may lack organization and make it challenging to target needs.

cs.IR

Calibrated Intervention and Containment of the COVID-19 Pandemic

Within a short period of time, COVID-19 grew into a world-wide pandemic. Transmission by pre-symptomatic and asymptomatic viral carriers rendered intervention and containment of the disease extremely challenging. Based on reported infection case studies, we construct an epidemiological model that focuses on transmission around the symptom onset. The model is calibrated against incubation period and pairwise transmission statistics during the initial outbreaks of the pandemic outside Wuhan with minimal non-pharmaceutical interventions. Mathematical treatment of the model yields explicit expressions for the size of latent and pre-symptomatic subpopulations during the exponential growth phase, with the local epidemic growth rate as input. We then explore reduction of the basic reproduction number R_0 through specific disease control measures such as contact tracing, testing, social distancing, wearing masks and sheltering in place. When these measures are implemented in combination, their effects on R_0 multiply. We also compare our model behaviour to the first wave of the COVID-19 spreading in various affected regions and highlight generic and less generic features of the pandemic development.

q-bio.PE

Unsupervised Feature Selection via Multi-step Markov Transition Probability

Feature selection is a widely used dimension reduction technique to select feature subsets because of its interpretability. Many methods have been proposed and achieved good results, in which the relationships between adjacent data points are mainly concerned. But the possible associations between data pairs that are may not adjacent are always neglected. Different from previous methods, we propose a novel and very simple approach for unsupervised feature selection, named MMFS (Multi-step Markov transition probability for Feature Selection). The idea is using multi-step Markov transition probability to describe the relation between any data pair. Two ways from the positive and negative viewpoints are employed respectively to keep the data structure after feature selection. From the positive viewpoint, the maximum transition probability that can be reached in a certain number of steps is used to describe the relation between two points. Then, the features which can keep the compact data structure are selected. From the viewpoint of negative, the minimum transition probability that can be reached in a certain number of steps is used to describe the relation between two points. On the contrary, the features that least maintain the loose data structure are selected. And the two ways can also be combined. Thus three algorithms are proposed. Our main contributions are a novel feature section approach which uses multi-step transition probability to characterize the data structure, and three algorithms proposed from the positive and negative aspects for keeping data structure. The performance of our approach is compared with the state-of-the-art methods on eight real-world data sets, and the experimental results show that the proposed MMFS is effective in unsupervised feature selection.

cs.LG

Bridges in Complex Networks

A bridge in a graph is an edge whose removal disconnects the graph and increases the number of connected components. We calculate the fraction of bridges in a wide range of real-world networks and their randomized counterparts. We find that real networks typically have more bridges than their completely randomized counterparts, but very similar fraction of bridges as their degree-preserving randomizations. We define a new edge centrality measure, called bridgeness, to quantify the importance of a bridge in damaging a network. We find that certain real networks have very large average and variance of bridgeness compared to their degree-preserving randomizations and other real networks. Finally, we offer an analytical framework to calculate the bridge fraction , the average and variance of bridgeness for uncorrelated random networks with arbitrary degree distributions.

physics.soc-ph

Articulation Points in Complex Networks

An articulation point in a network is a node whose removal disconnects the network. Those nodes play key roles in ensuring connectivity of many real-world networks, from infrastructure networks to protein interaction networks and terrorist communication networks. Despite their fundamental importance, a general framework of studying articulation points in complex networks is lacking. Here we develop analytical tools to study key issues pertinent to articulation points, e.g. the expected number of them and the network vulnerability against their removal, in an arbitrary complex network. We find that a greedy articulation point removal process provides us a novel perspective on the organizational principles of complex networks. Moreover, this process is associated with two fundamentally different types of percolation transitions with a rich phase diagram. Our results shed light on the design of more resilient infrastructure networks and the effective destruction of terrorist communication networks.

physics.soc-ph

Phase transitions of the q-state Potts model on multiply-laced Sierpinski gaskets

We present an exact solution of the q-state Potts model on a class of generalized Sierpinski fractal lattices. The model is shown to possess an ordered phase at low temperatures and a continuous transition to the high temperature disordered phase at any q>=1. Multicriticality is observed in the presence of a symmetry-breaking field. Exact renormalization group analysis yields the phase diagram of the model and a complete set of critical exponents at various transitions.

cond-mat.dis-nn

The Nature of Explosive Percolation Phase Transition

In this Letter, we show that the explosive percolation is a novel continuous phase transition. The order-parameter-distribution histogram at the percolation threshold is studied in Erdős-Rényi networks, scale-free networks, and square lattice. In finite system, two well-defined Gaussian-like peaks coexist, and the valley between the two peaks is suppressed with the system size increasing. This finite-size effect always appears in typical first-order phase transition. However, both of the two peaks shift to zero point in a power law manner, which indicates the explosive percolation is continuous in the thermodynamic limit. The nature of explosive percolation in all the three structures belongs to this novel continuous phase transition. Various scaling exponents concerning the order-parameter-distribution are obtained.

cond-mat.dis-nn