arXiv subjects

Lin Yang

Publications and source records attributed to Lin Yang.

At least 91 records · Page 5Linked to original sources

arXiv2025

A Planning Framework for Stable Robust Multi-Contact Manipulation

While modeling multi-contact manipulation as a quasi-static mechanical process transitioning between different contact equilibria, we propose formulating it as a planning and optimization problem, explicitly evaluating (i) contact stability and (ii) robustness to sensor noise. Specifically, we conduct a comprehensive study on multi-manipulator control strategies, focusing on dual-arm execution in a planar peg-in-hole task and extending it to the Multi-Manipulator Multiple Peg-in-Hole (MMPiH) problem to explore increased task complexity. Our framework employs Dynamic Movement Primitives (DMPs) to parameterize desired trajectories and Black-Box Optimization (BBO) with a comprehensive cost function incorporating friction cone constraints, squeeze forces, and stability considerations. By integrating parallel scenario training, we enhance the robustness of the learned policies. To evaluate the friction cone cost in experiments, we test the optimal trajectories computed for various contact surfaces, i.e., with different coefficients of friction. The stability cost is analytical explained and tested its necessity in simulation. The robustness performance is quantified through variations of hole pose and chamfer size in simulation and experiment. Results demonstrate that our approach achieves consistently high success rates in both the single peg-in-hole and multiple peg-in-hole tasks, confirming its effectiveness and generalizability. The video can be found at https://youtu.be/IU0pdnSd4tE.

cs.RO↗

arXiv2025

Enhancing Embedding Representation Stability in Recommendation Systems with Semantic ID

The exponential growth of online content has posed significant challenges to ID-based models in industrial recommendation systems, ranging from extremely high cardinality and dynamically growing ID space, to highly skewed engagement distributions, to prediction instability as a result of natural id life cycles (e.g, the birth of new IDs and retirement of old IDs). To address these issues, many systems rely on random hashing to handle the id space and control the corresponding model parameters (i.e embedding table). However, this approach introduces data pollution from multiple ids sharing the same embedding, leading to degraded model performance and embedding representation instability. This paper examines these challenges and introduces Semantic ID prefix ngram, a novel token parameterization technique that significantly improves the performance of the original Semantic ID. Semantic ID prefix ngram creates semantically meaningful collisions by hierarchically clustering items based on their content embeddings, as opposed to random assignments. Through extensive experimentation, we demonstrate that Semantic ID prefix ngram not only addresses embedding instability but also significantly improves tail id modeling, reduces overfitting, and mitigates representation shifts. We further highlight the advantages of Semantic ID prefix ngram in attention-based models that contextualize user histories, showing substantial performance improvements. We also report our experience of integrating Semantic ID into Meta production Ads Ranking system, leading to notable performance gains and enhanced prediction stability in live deployments.

cs.IR↗

arXiv2025

Calibration of Complementary Metal-oxide-semiconductor Sensor-based Photometry to a Few-millimagnitude Precision: The Case of the Mini-SiTian Array

We present a pioneering achievement in the high-precision photometric calibration of CMOS-based photometry, by application of the Gaia BP/RP (XP) spectra-based synthetic photometry (XPSP) method to the mini-SiTian array (MST) photometry. Through 79 repeated observations of the $\texttt{f02}$ field on the night, we find good internal consistency in the calibrated MST $G_{\rm MST}$-band magnitudes for relatively bright stars, with a precision of about 4\,mmag for $G_{\rm MST}\sim 13$. Results from more than 30 different nights (over 3100 observations) further confirm this internal consistency, indicating that the 4\,mmag precision is stable and achievable over timescales of months. An independent external validation using spectroscopic data from the Large Sky Area Multi-Object Fiber Spectroscopic Telescope (LAMOST) DR10 and high-precision photometric data using CCDs from Gaia DR3 reveals a zero-point consistency better than 1\,mmag. Our results clearly demonstrate that CMOS photometry is on par with CCD photometry for high-precision results, highlighting the significant capabilities of CMOS cameras in astronomical observations, especially for large-scale telescope survey arrays.

astro-ph.IM↗

arXiv2025

PathVQ: Reforming Computational Pathology Foundation Model for Whole Slide Image Analysis via Vector Quantization

Computational pathology and whole-slide image (WSI) analysis are pivotal in cancer diagnosis and prognosis. However, the ultra-high resolution of WSIs presents significant modeling challenges. Recent advancements in pathology foundation models have improved performance, yet most approaches rely on [CLS] token representation of tile ViT as slide-level inputs (16x16 pixels is refereed as patch and 224x224 pixels as tile). This discards critical spatial details from patch tokens, limiting downstream WSI analysis tasks. We find that leveraging all spatial patch tokens benefits WSI analysis but incurs nearly 200x higher storage and training costs (e.g., 196 tokens in ViT$_{224}$). To address this, we introduce vector quantized (VQ) distillation on patch feature, which efficiently compresses spatial patch tokens using discrete indices and a decoder. Our method reduces token dimensionality from 1024 to 16, achieving a 64x compression rate while preserving reconstruction fidelity. Furthermore, we employ a multi-scale VQ (MSVQ) strategy, which not only enhances VQ reconstruction performance but also serves as a Self-supervised Learning (SSL) supervision for a seamless slide-level pretraining objective. Built upon the quantized patch features and supervision targets of tile via MSVQ, we develop a progressive convolutional module and slide-level SSL to extract representations with rich spatial-information for downstream WSI tasks. Extensive evaluations on multiple datasets demonstrate the effectiveness of our approach, achieving state-of-the-art performance in WSI analysis. Code will be available soon.

cs.CV↗

arXiv2025

Path Planning in Complex Environments with Superquadrics and Voronoi-Based Orientation

Path planning in narrow passages is a challenging problem in various applications. Traditional planning algorithms often face challenges in complex environments like mazes and traps, where narrow entrances require special orientation control for successful navigation. In this work, we present a novel approach that combines superquadrics (SQ) representation and Voronoi diagrams to solve the narrow passage problem in both 2D and 3D environment. Our method utilizes the SQ formulation to expand obstacles, eliminating impassable passages, while Voronoi hyperplane ensures maximum clearance path. Additionally, the hyperplane provides a natural reference for robot orientation, aligning its long axis with the passage direction. We validate our framework through a 2D object retrieval task and 3D drone simulation, demonstrating that our approach outperforms classical planners and a cutting-edge drone planner by ensuring passable trajectories with maximum clearance.

cs.RO↗

arXiv2025

CoCa-CXR: Contrastive Captioners Learn Strong Temporal Structures for Chest X-Ray Vision-Language Understanding

Vision-language models have proven to be of great benefit for medical image analysis since they learn rich semantics from both images and reports. Prior efforts have focused on better alignment of image and text representations to enhance image understanding. However, though explicit reference to a prior image is common in Chest X-Ray (CXR) reports, aligning progression descriptions with the semantics differences in image pairs remains under-explored. In this work, we propose two components to address this issue. (1) A CXR report processing pipeline to extract temporal structure. It processes reports with a large language model (LLM) to separate the description and comparison contexts, and extracts fine-grained annotations from reports. (2) A contrastive captioner model for CXR, namely CoCa-CXR, to learn how to both describe images and their temporal progressions. CoCa-CXR incorporates a novel regional cross-attention module to identify local differences between paired CXR images. Extensive experiments show the superiority of CoCa-CXR on both progression analysis and report generation compared to previous methods. Notably, on MS-CXR-T progression classification, CoCa-CXR obtains 65.0% average testing accuracy on five pulmonary conditions, outperforming the previous state-of-the-art (SOTA) model BioViL-T by 4.8%. It also achieves a RadGraph F1 of 24.2% on MIMIC-CXR, which is comparable to the Med-Gemini foundation model.

cs.CV↗

arXiv2025

PolyPath: Adapting a Large Multimodal Model for Multi-slide Pathology Report Generation

The interpretation of histopathology cases underlies many important diagnostic and treatment decisions in medicine. Notably, this process typically requires pathologists to integrate and summarize findings across multiple slides per case. Existing vision-language capabilities in computational pathology have so far been largely limited to small regions of interest, larger regions at low magnification, or single whole-slide images (WSIs). This limits interpretation of findings that span multiple high-magnification regions across multiple WSIs. By making use of Gemini 1.5 Flash, a large multimodal model (LMM) with a 1-million token context window, we demonstrate the ability to generate bottom-line diagnoses from up to 40,000 768x768 pixel image patches from multiple WSIs at 10X magnification. This is the equivalent of up to 11 hours of video at 1 fps. Expert pathologist evaluations demonstrate that the generated report text is clinically accurate and equivalent to or preferred over the original reporting for 68% (95% CI: [60%, 76%]) of multi-slide examples with up to 5 slides. While performance decreased for examples with 6 or more slides, this study demonstrates the promise of leveraging the long-context capabilities of modern LMMs for the uniquely challenging task of medical report generation where each case can contain thousands of image patches.

cs.CV↗

arXiv2025

Transition Transfer $Q$-Learning for Composite Markov Decision Processes

To bridge the gap between empirical success and theoretical understanding in transfer reinforcement learning (RL), we study a principled approach with provable performance guarantees. We introduce a novel composite MDP framework where high-dimensional transition dynamics are modeled as the sum of a low-rank component representing shared structure and a sparse component capturing task-specific variations. This relaxes the common assumption of purely low-rank transition models, allowing for more realistic scenarios where tasks share core dynamics but maintain individual variations. We introduce UCB-TQL (Upper Confidence Bound Transfer Q-Learning), designed for transfer RL scenarios where multiple tasks share core linear MDP dynamics but diverge along sparse dimensions. When applying UCB-TQL to a target task after training on a source task with sufficient trajectories, we achieve a regret bound of $\tilde{O}(\sqrt{eH^5N})$ that scales independently of the ambient dimension. Here, $N$ represents the number of trajectories in the target task, while $e$ quantifies the sparse differences between tasks. This result demonstrates substantial improvement over single task RL by effectively leveraging their structural similarities. Our theoretical analysis provides rigorous guarantees for how UCB-TQL simultaneously exploits shared dynamics while adapting to task-specific variations.

stat.ML↗

arXiv2025

Large-scale and Fine-grained Vision-language Pre-training for Enhanced CT Image Understanding

Artificial intelligence (AI) shows great potential in assisting radiologists to improve the efficiency and accuracy of medical image interpretation and diagnosis. However, a versatile AI model requires large-scale data and comprehensive annotations, which are often impractical in medical settings. Recent studies leverage radiology reports as a naturally high-quality supervision for medical images, using contrastive language-image pre-training (CLIP) to develop language-informed models for radiological image interpretation. Nonetheless, these approaches typically contrast entire images with reports, neglecting the local associations between imaging regions and report sentences, which may undermine model performance and interoperability. In this paper, we propose a fine-grained vision-language model (fVLM) for anatomy-level CT image interpretation. Specifically, we explicitly match anatomical regions of CT images with corresponding descriptions in radiology reports and perform contrastive pre-training for each anatomy individually. Fine-grained alignment, however, faces considerable false-negative challenges, mainly from the abundance of anatomy-level healthy samples and similarly diseased abnormalities. To tackle this issue, we propose identifying false negatives of both normal and abnormal samples and calibrating contrastive learning from patient-level to disease-aware pairing. We curated the largest CT dataset to date, comprising imaging and report data from 69,086 patients, and conducted a comprehensive evaluation of 54 major and important disease diagnosis tasks across 15 main anatomies. Experimental results demonstrate the substantial potential of fVLM in versatile medical image interpretation. In the zero-shot classification task, we achieved an average AUC of 81.3% on 54 diagnosis tasks, surpassing CLIP and supervised methods by 12.9% and 8.0%, respectively.

cs.CV↗

arXiv2025

Hierarchical Structured Neural Network: Efficient Retrieval Scaling for Large Scale Recommendation

Retrieval, the initial stage of a recommendation system, is tasked with down-selecting items from a pool of tens of millions of candidates to a few thousands. Embedding Based Retrieval (EBR) has been a typical choice for this problem, addressing the computational demands of deep neural networks across vast item corpora. EBR utilizes Two Tower or Siamese Networks to learn representations for users and items, and employ Approximate Nearest Neighbor (ANN) search to efficiently retrieve relevant items. Despite its popularity in industry, EBR faces limitations. The Two Tower architecture, relying on a single dot product interaction, struggles to capture complex data distributions due to limited capability in learning expressive interactions between users and items. Additionally, ANN index building and representation learning for user and item are often separate, leading to inconsistencies exacerbated by representation (e.g. continuous online training) and item drift (e.g. items expired and new items added). In this paper, we introduce the Hierarchical Structured Neural Network (HSNN), an efficient deep neural network model to learn intricate user and item interactions beyond the commonly used dot product in retrieval tasks, achieving sublinear computational costs relative to corpus size. A Modular Neural Network (MoNN) is designed to maintain high expressiveness for interaction learning while ensuring efficiency. A mixture of MoNNs operate on a hierarchical item index to achieve extensive computation sharing, enabling it to scale up to large corpus size. MoNN and the hierarchical index are jointly learnt to continuously adapt to distribution shifts in both user interests and item distributions. HSNN achieves substantial improvement in offline evaluation compared to prevailing methods.

cs.IR↗

arXiv2025

The S-PLUS Ultra-Short Survey: Photometric Re-calibration with the BEst STar Database

We present an independent validation and comprehensive re-calibration of S-PLUS Ultra-Short Survey (USS) DR1 12-band photometry using about 30,000--70,000 standard stars from the BEst STar (BEST) database. We identify spatial variation of zero-point offsets, up to 30--40\,mmag for blue filters ($u$, $J0378$, $J0395$) and 10\,mmag for others, predominantly due to the higher uncertainties of the technique employed in the original USS calibration. Moreover, we detect large- and medium-scale CCD position-dependent systematic errors, up to 50\,mmag, primarily caused by different aperture and flat-field corrections. We then re-calibrate the USS DR1 photometry by correcting the systematic shifts for each tile using second-order two-dimensional polynomial fitting combined with a numerical stellar flat-field correction method. The re-calibrated results from the XPSP and the SCR standards are consistent within 6\,mmag in the USS zero-points, demonstrating both the typical precision of re-calibrated USS photometry and a sixfold improvement in USS zero-point precision. Further validation using SDSS and Pan-STARRS1, as well as LAMOST DR10 and Gaia photometry, also confirms this precision for the re-calibrated USS photometry. Our results clearly demonstrate the capability and the efficiency of the BEST database in improving calibration precision to the milli-magnitude level for wide-field photometric surveys. The re-calibrated USS DR1 photometry is publicly available: doi: 10.12149/101503 (https://nadc.china-vo.org/res/r101504/).

astro-ph.GA↗

arXiv2024

CPath-Omni: A Unified Multimodal Foundation Model for Patch and Whole Slide Image Analysis in Computational Pathology

The emergence of large multimodal models (LMMs) has brought significant advancements to pathology. Previous research has primarily focused on separately training patch-level and whole-slide image (WSI)-level models, limiting the integration of learned knowledge across patches and WSIs, and resulting in redundant models. In this work, we introduce CPath-Omni, the first 15-billion-parameter LMM designed to unify both patch and WSI level image analysis, consolidating a variety of tasks at both levels, including classification, visual question answering, captioning, and visual referring prompting. Extensive experiments demonstrate that CPath-Omni achieves state-of-the-art (SOTA) performance across seven diverse tasks on 39 out of 42 datasets, outperforming or matching task-specific models trained for individual tasks. Additionally, we develop a specialized pathology CLIP-based visual processor for CPath-Omni, CPath-CLIP, which, for the first time, integrates different vision models and incorporates a large language model as a text encoder to build a more powerful CLIP model, which achieves SOTA performance on nine zero-shot and four few-shot datasets. Our findings highlight CPath-Omni's ability to unify diverse pathology tasks, demonstrating its potential to streamline and advance the field of foundation model in pathology.

cs.CV↗

arXiv2024

DarkSHINE Baseline Design Report: Physics Prospects and Detector Technologies

DarkSHINE is a newly proposed fixed-target experiment initiative to search for the invisible decay of Dark Photon via missing energy/momentum signatures, based on the high repetition rate electron beam to be deployed/delivered by the Shanghai High repetition rate XFEL and Extreme light facility (SHINE). This report elaborates the baseline design of DarkSHINE experiment by introducing the physics goals, experimental setups, details of each sub-detector system technical designs, signal and backgground modelings, expected search sensitivities and future prospects, which mark an important step towards the further prototyping and technical demonstrations.

physics.ins-det↗

arXiv2024

Health AI Developer Foundations

Robust medical Machine Learning (ML) models have the potential to revolutionize healthcare by accelerating clinical research, improving workflows and outcomes, and producing novel insights or capabilities. Developing such ML models from scratch is cost prohibitive and requires substantial compute, data, and time (e.g., expert labeling). To address these challenges, we introduce Health AI Developer Foundations (HAI-DEF), a suite of pre-trained, domain-specific foundation models, tools, and recipes to accelerate building ML for health applications. The models cover various modalities and domains, including radiology (X-rays and computed tomography), histopathology, dermatological imaging, and audio. These models provide domain specific embeddings that facilitate AI development with less labeled data, shorter training times, and reduced computational costs compared to traditional approaches. In addition, we utilize a common interface and style across these models, and prioritize usability to enable developers to integrate HAI-DEF efficiently. We present model evaluations across various tasks and conclude with a discussion of their application and evaluation, covering the importance of ensuring efficacy, fairness, and equity. Finally, while HAI-DEF and specifically the foundation models lower the barrier to entry for ML in healthcare, we emphasize the importance of validation with problem- and population-specific data for each desired usage setting. This technical report will be updated over time as more modalities and features are added.

cs.LG↗

arXiv2024

Panther: Illuminate the Sight of Multimodal LLMs with Instruction-Guided Visual Prompts

Multimodal large language models (MLLMs) are closing the gap to human visual perception capability rapidly, while, still lag behind on attending to subtle images details or locating small objects precisely, etc. Common schemes to tackle these issues include deploying multiple vision encoders or operating on original high-resolution images. Few studies have concentrated on taking the textual instruction into improving visual representation, resulting in losing focus in some vision-centric tasks, a phenomenon we herein termed as Amblyopia. In this work, we introduce Panther, a MLLM that closely adheres to user instruction and locates targets of interests precisely, with the finesse of a black panther. Specifically, Panther comprises three integral components: Panther-VE, Panther-Bridge, and Panther-Decoder. Panther-VE integrates user instruction information at the early stages of the vision encoder, thereby extracting the most relevant and useful visual representations. The Panther-Bridge module, equipped with powerful filtering capabilities, significantly reduces redundant visual information, leading to a substantial savings in training costs. The Panther-Decoder is versatile and can be employed with any decoder-only architecture of LLMs without discrimination. Experimental results, particularly on vision-centric benchmarks, have demonstrated the effectiveness of Panther.

cs.CV↗

arXiv2024

Lines of Bound States in the Continuum in a Phononic Crystal Slab

We demonstrate that bound states in the continuum (BICs) form continuous lines along high-symmetry directions of momentum space in a simple phononic crystal slab. Contrary to common sense, these BICs are symmetry-protected (SP) BICs not only at the center of the Brillouin zone (gamma point) but also off the gamma point. We utilize numerical simulations, a group theory method, and a mode expansion method to comprehensively understand the formation of the BICs. It is revealed that these BICs correspond to phase singularity lines of far-field radiation, and the phase winding number can be defined as a topological index. This makes the BICs topologically protected and robust to any parameter variation that maintains periodicity and rotational symmetry. Finally, the generation of the BICs lines is experimentally demonstrated.

cond-mat.mtrl-sci↗

arXiv2024

Rethinking Transformer for Long Contextual Histopathology Whole Slide Image Analysis

Histopathology Whole Slide Image (WSI) analysis serves as the gold standard for clinical cancer diagnosis in the daily routines of doctors. To develop computer-aided diagnosis model for WSIs, previous methods typically employ Multi-Instance Learning to enable slide-level prediction given only slide-level labels. Among these models, vanilla attention mechanisms without pairwise interactions have traditionally been employed but are unable to model contextual information. More recently, self-attention models have been utilized to address this issue. To alleviate the computational complexity of long sequences in large WSIs, methods like HIPT use region-slicing, and TransMIL employs approximation of full self-attention. Both approaches suffer from suboptimal performance due to the loss of key information. Moreover, their use of absolute positional embedding struggles to effectively handle long contextual dependencies in shape-varying WSIs. In this paper, we first analyze how the low-rank nature of the long-sequence attention matrix constrains the representation ability of WSI modelling. Then, we demonstrate that the rank of attention matrix can be improved by focusing on local interactions via a local attention mask. Our analysis shows that the local mask aligns with the attention patterns in the lower layers of the Transformer. Furthermore, the local attention mask can be implemented during chunked attention calculation, reducing the quadratic computational complexity to linear with a small local bandwidth. Building on this, we propose a local-global hybrid Transformer for both computational acceleration and local-global information interactions modelling. Our method, Long-contextual MIL (LongMIL), is evaluated through extensive experiments on various WSI tasks to validate its superiority. Our code will be available at github.com/invoker-LL/Long-MIL.

cs.CV↗

arXiv2024

On the Evaluation of Large Language Models in Unit Test Generation

Unit testing is an essential activity in software development for verifying the correctness of software components. However, manually writing unit tests is challenging and time-consuming. The emergence of Large Language Models (LLMs) offers a new direction for automating unit test generation. Existing research primarily focuses on closed-source LLMs (e.g., ChatGPT and CodeX) with fixed prompting strategies, leaving the capabilities of advanced open-source LLMs with various prompting settings unexplored. Particularly, open-source LLMs offer advantages in data privacy protection and have demonstrated superior performance in some tasks. Moreover, effective prompting is crucial for maximizing LLMs' capabilities. In this paper, we conduct the first empirical study to fill this gap, based on 17 Java projects, five widely-used open-source LLMs with different structures and parameter sizes, and comprehensive evaluation metrics. Our findings highlight the significant influence of various prompt factors, show the performance of open-source LLMs compared to the commercial GPT-4 and the traditional Evosuite, and identify limitations in LLM-based unit test generation. We then derive a series of implications from our study to guide future research and practical use of LLM-based unit test generation.

cs.SE↗