arXiv subjects

Lior Shamir

Publications and source records attributed to Lior Shamir.

86 records · Page 5Linked to original sources

arXiv2013

Automatic quantitative morphological analysis of interacting galaxies

The large number of galaxies imaged by digital sky surveys reinforces the need for computational methods for analyzing galaxy morphology. While the morphology of most galaxies can be associated with a stage on the Hubble sequence, morphology of galaxy mergers is far more complex due to the combination of two or more galaxies with different morphologies and the interaction between them. Here we propose a computational method based on unsupervised machine learning that can quantitatively analyze morphologies of galaxy mergers and associate galaxies by their morphology. The method works by first generating multiple synthetic galaxy models for each galaxy merger, and then extracting a large set of numerical image content descriptors for each galaxy model. These numbers are weighted using Fisher discriminant scores, and then the similarities between the galaxy mergers are deduced using a variation of Weighted Nearest Neighbor analysis such that the Fisher scores are used as weights. The similarities between the galaxy mergers are visualized using phylogenies to provide a graph that reflects the morphological similarities between the different galaxy mergers, and thus quantitatively profile the morphology of galaxy mergers.

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arXiv2013

Practices in source code sharing in astrophysics

While software and algorithms have become increasingly important in astronomy, the majority of authors who publish computational astronomy research do not share the source code they develop, making it difficult to replicate and reuse the work. In this paper we discuss the importance of sharing scientific source code with the entire astrophysics community, and propose that journals require authors to make their code publicly available when a paper is published. That is, we suggest that a paper that involves a computer program not be accepted for publication unless the source code becomes publicly available. The adoption of such a policy by editors, editorial boards, and reviewers will improve the ability to replicate scientific results, and will also make the computational astronomy methods more available to other researchers who wish to apply them to their data.

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arXiv2012

Handedness asymmetry of spiral galaxies with z<0.3 shows cosmic parity violation and a dipole axis

A dataset of 126,501 spiral galaxies taken from Sloan Digital Sky Survey was used to analyze the large-scale galaxy handedness in different regions of the local universe. The analysis was automated by using a transformation of the galaxy images to their radial intensity plots, which allows automatic analysis of the galaxy spin and can therefore be used to analyze a large galaxy dataset. The results show that the local universe (z<0.3) is not isotropic in terms of galaxy spin, with probability P<5.8*10^-6 of such asymmetry to occur by chance. The handedness asymmetries exhibit an approximate cosine dependence, and the most likely dipole axis was found at RA=132, DEC=32 with 1 sigma error range of 107 to 179 degrees for the RA. The probability of such axis to occur by chance is P<1.95*10^-5 . The amplitude of the handedness asymmetry reported in this paper is generally in agreement with Longo, but the statistical significance is improved by a factor of 40, and the direction of the axis disagrees somewhat.

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arXiv2012

Practices in Code Discoverability

Much of scientific progress now hinges on the reliability, falsifiability and reproducibility of computer source codes. Astrophysics in particular is a discipline that today leads other sciences in making useful scientific components freely available online, including data, abstracts, preprints, and fully published papers, yet even today many astrophysics source codes remain hidden from public view. We review the importance and history of source codes in astrophysics and previous efforts to develop ways in which information about astrophysics codes can be shared. We also discuss why some scientist coders resist sharing or publishing their codes, the reasons for and importance of overcoming this resistance, and alert the community to a reworking of one of the first attempts for sharing codes, the Astrophysics Source Code Library (ASCL). We discuss the implementation of the ASCL in an accompanying poster paper. We suggest that code could be given a similar level of referencing as data gets in repositories such as ADS.

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arXiv2012

Practices in Code Discoverability: Astrophysics Source Code Library

Here we describe the Astrophysics Source Code Library (ASCL), which takes an active approach to sharing astrophysical source code. ASCL's editor seeks out both new and old peer-reviewed papers that describe methods or experiments that involve the development or use of source code, and adds entries for the found codes to the library. This approach ensures that source codes are added without requiring authors to actively submit them, resulting in a comprehensive listing that covers a significant number of the astrophysics source codes used in peer-reviewed studies. The ASCL now has over 340 codes in it and continues to grow. In 2011, the ASCL (http://ascl.net) has on average added 19 new codes per month. An advisory committee has been established to provide input and guide the development and expansion of the new site, and a marketing plan has been developed and is being executed. All ASCL source codes have been used to generate results published in or submitted to a refereed journal and are freely available either via a download site or from an identified source. This paper provides the history and description of the ASCL. It lists the requirements for including codes, examines the benefits of the ASCL, and outlines some of its future plans.

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arXiv2011

Ganalyzer: A tool for automatic galaxy image analysis

We describe Ganalyzer, a model-based tool that can automatically analyze and classify galaxy images. Ganalyzer works by separating the galaxy pixels from the background pixels, finding the center and radius of the galaxy, generating the radial intensity plot, and then computing the slopes of the peaks detected in the radial intensity plot to measure the spirality of the galaxy and determine its morphological class. Unlike algorithms that are based on machine learning, Ganalyzer is based on measuring the spirality of the galaxy, a task that is difficult to perform manually, and in many cases can provide a more accurate analysis compared to manual observation. Ganalyzer is simple to use, and can be easily embedded into other image analysis applications. Another advantage is its speed, which allows it to analyze ~10,000,000 galaxy images in five days using a standard modern desktop computer. These capabilities can make Ganalyzer a useful tool in analyzing large datasets of galaxy images collected by autonomous sky surveys such as SDSS, LSST or DES. The software is available for free download at http://vfacstaff.ltu.edu/lshamir/downloads/ganalyzer, and the data used in the experiment are available at http://vfacstaff.ltu.edu/lshamir/downloads/ganalyzer/GalaxyImages.zip.

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arXiv2009

Automatic morphological classification of galaxy images

We describe an image analysis supervised learning algorithm that can automatically classify galaxy images. The algorithm is first trained using a manually classified images of elliptical, spiral, and edge-on galaxies. A large set of image features is extracted from each image, and the most informative features are selected using Fisher scores. Test images can then be classified using a simple Weighted Nearest Neighbor rule such that the Fisher scores are used as the feature weights. Experimental results show that galaxy images from Galaxy Zoo can be classified automatically to spiral, elliptical and edge-on galaxies with accuracy of ~90% compared to classifications carried out by the author. Full compilable source code of the algorithm is available for free download, and its general-purpose nature makes it suitable for other uses that involve automatic image analysis of celestial objects.

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arXiv2009

Frequency Limits on Naked-Eye Optical Transients Lasting from Minutes to Years

How often do bright optical transients occur on the sky but go unreported? To constrain the bright end of the astronomical transient function, a systematic search for transients that become bright enough to be noticed by the unaided eye was conducted using the all-sky monitors of the Night Sky Live network. Two fisheye continuous cameras (CONCAMs) operating over three years created a data base that was searched for transients that appeared in time-contiguous CCD frames. Although a single candidate transient was found (Nemiroff and Shamir 2006), the lack of more transients is used here to deduce upper limits to the general frequency of bright transients. To be detected, a transient must have increased by over three visual magnitudes to become brighter than visual magnitude 5.5 on the time scale of minutes to years. It is concluded that, on the average, fewer than 0.0040 ($t_{dur} / 60$ seconds) transients with duration $t_{dur}$ between minutes and hours, occur anywhere on the sky at any one time. For transients on the order of months to years, fewer than 160 ($t_{dur} / 1$ year) occur, while for transients on the order of years to millennia, fewer than 50 ($t_{dur}/1$ year)$^2$ occur.

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arXiv2006

OT 060420: A Seemingly Optical Transient Recorded by All-Sky Cameras

We report on a ~5th magnitude flash detected for approximately 10 minutes by two CONCAM all-sky cameras located in Cerro Pachon - Chile and La Palma - Spain. A third all-sky camera, located in Cerro Paranal - Chile did not detect the flash, and therefore the authors of this paper suggest that the flash was a series of cosmic-ray hits, meteors, or satellite glints. Another proposed hypothesis is that the flash was an astronomical transient with variable luminosity. In this paper we discuss bright optical transient detection using fish-eye all-sky monitors, analyze the apparently false-positive optical transient, and propose possible causes to false optical transient detection in all-sky cameras.

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arXiv2005

Software design for panoramic astronomical pipeline processing

We describe the software requirement and design specifications for all-sky panoramic astronomical pipelines. The described software aims to meet the specific needs of super-wide angle optics, and includes cosmic-ray hit rejection, image compression, star recognition, sky opacity analysis, transient detection and a web server allowing access to real-time and archived data. The presented software is being regularly used for the pipeline processing of 11 all-sky cameras located in some of the world's premier observatories. We encourage all-sky camera operators to use our software and/or our hosting services and become part of the global Night Sky Live network.

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arXiv2005

Using Fuzzy Logic for Automatic Analysis of Astronomical Pipelines

Fundamental astronomical questions on the composition of the universe, the abundance of Earth-like planets, and the cause of the brightest explosions in the universe are being attacked by robotic telescopes costing billions of dollars and returning vast pipelines of data. The success of these programs depends on the accuracy of automated real time processing of the astronomical images. In this paper the needs of modern astronomical pipelines are discussed in the light of fuzzy-logic based decision-making. Several specific fuzzy-logic algorithms have been develop for the first time for astronomical purposes, and tested with excellent results on data from the existing Night Sky Live sky survey.

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arXiv2005

All-sky Relative Opacity Mapping Using Night Time Panoramic Images

An all-sky cloud monitoring system that generates relative opacity maps over many of the world's premier astronomical observatories is described. Photometric measurements of numerous background stars are combined with simultaneous sky brightness measurements to differentiate thin clouds from sky glow sources such as air glow and zodiacal light. The system takes a continuous pipeline of all-sky images, and compares them to canonical images taken on other nights at the same sidereal time. Data interpolation then yields transmission maps covering almost the entire sky. An implementation of this system is currently operating through the Night Sky Live network of CONCAM3s located at Cerro Pachon (Chile), Mauna Kea (Hawaii), Haleakala (Hawaii), SALT (South Africa) and the Canary Islands (Northwestern Africa).

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arXiv2005

A Fuzzy Logic Based Algorithm for Finding Astronomical Objects in Wide-Angle Frames

Accurate automatic identification of astronomical objects in an imperfect world of non-linear wide-angle optics, imperfect optics, inaccurately pointed telescopes, and defect-ridden cameras is not always a trivial first step. In the past few years, this problem has been exacerbated by the rise of digital imaging, providing vast digital streams of astronomical images and data. In the modern age of increasing bandwidth, human identifications are many times impracticably slow. In order to perform an automatic computer-based analysis of astronomical frames, a quick and accurate identification of astronomical objects is required. Such identification must follow a rigorous transformation from topocentric celestial coordinates into image coordinates on a CCD frame. This paper presents a fuzzy logic based algorithm that estimates needed coordinate transformations in a practical setting. Using a training set of reference stars, the algorithm statically builds a fuzzy logic model. At runtime, the algorithm uses this model to associate stellar objects visible in the frames to known-catalogued objects, and generates files that contain photometry information of objects visible in the frame. Use of this algorithm facilitates real-time monitoring of stars and bright transients, allowing identifications and alerts to be issued more reliably. The algorithm is being implemented by the Night Sky Live all-sky monitoring global network and has shown itself significantly more reliable than the previously used non-fuzzy logic algorithm.

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arXiv2004

PHOTZIP: A Lossy FITS Image Compression Algorithm that Protects User-Defined Levels of Photometric Integrity

A lossy compression algorithm is presented for astronomical images that protects photometric integrity for detected point sources at a user-defined level of statistical tolerance. PHOTZIP works by modeling, smoothing, and then compressing the astronomical background behind self-detected point sources, while completely preserving values in and around those sources. The algorithm also guaranties a maximum absolute difference (in terms of $σ$) between each compressed and original background pixel, allowing users to control quality and lossiness. For present purposes, PHOTZIP has been tailored to FITS format and is freely available over the web. PHOTOZIP has been tested over a broad range of astronomical imagery and is in routine use by the Night Sky Live (NSL) project for compression of all-sky FITS images. Compression factors depend on source densities, but for the canonical NSL implementation, a PHOTZIP (and subsequently GZIP or BZIP2) compressed file is typically 20% of its uncompressed size.

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