arXiv subjects

Luping Zhou

Publications and source records attributed to Luping Zhou.

At least 55 records · Page 3Linked to original sources

arXiv2024

KARGEN: Knowledge-enhanced Automated Radiology Report Generation Using Large Language Models

Harnessing the robust capabilities of Large Language Models (LLMs) for narrative generation, logical reasoning, and common-sense knowledge integration, this study delves into utilizing LLMs to enhance automated radiology report generation (R2Gen). Despite the wealth of knowledge within LLMs, efficiently triggering relevant knowledge within these large models for specific tasks like R2Gen poses a critical research challenge. This paper presents KARGEN, a Knowledge-enhanced Automated radiology Report GENeration framework based on LLMs. Utilizing a frozen LLM to generate reports, the framework integrates a knowledge graph to unlock chest disease-related knowledge within the LLM to enhance the clinical utility of generated reports. This is achieved by leveraging the knowledge graph to distill disease-related features in a designed way. Since a radiology report encompasses both normal and disease-related findings, the extracted graph-enhanced disease-related features are integrated with regional image features, attending to both aspects. We explore two fusion methods to automatically prioritize and select the most relevant features. The fused features are employed by LLM to generate reports that are more sensitive to diseases and of improved quality. Our approach demonstrates promising results on the MIMIC-CXR and IU-Xray datasets.

cs.CV↗

arXiv2024

Group-aware Parameter-efficient Updating for Content-Adaptive Neural Video Compression

Content-adaptive compression is crucial for enhancing the adaptability of the pre-trained neural codec for various contents. Although these methods have been very practical in neural image compression (NIC), their application in neural video compression (NVC) is still limited due to two main aspects: 1), video compression relies heavily on temporal redundancy, therefore updating just one or a few frames can lead to significant errors accumulating over time; 2), NVC frameworks are generally more complex, with many large components that are not easy to update quickly during encoding. To address the previously mentioned challenges, we have developed a content-adaptive NVC technique called Group-aware Parameter-Efficient Updating (GPU). Initially, to minimize error accumulation, we adopt a group-aware approach for updating encoder parameters. This involves adopting a patch-based Group of Pictures (GoP) training strategy to segment a video into patch-based GoPs, which will be updated to facilitate a globally optimized domain-transferable solution. Subsequently, we introduce a parameter-efficient delta-tuning strategy, which is achieved by integrating several light-weight adapters into each coding component of the encoding process by both serial and parallel configuration. Such architecture-agnostic modules stimulate the components with large parameters, thereby reducing both the update cost and the encoding time. We incorporate our GPU into the latest NVC framework and conduct comprehensive experiments, whose results showcase outstanding video compression efficiency across four video benchmarks and adaptability of one medical image benchmark.

eess.IV↗

arXiv2024

Progressive Classifier and Feature Extractor Adaptation for Unsupervised Domain Adaptation on Point Clouds

Unsupervised domain adaptation (UDA) is a critical challenge in the field of point cloud analysis. Previous works tackle the problem either by feature extractor adaptation to enable a shared classifier to distinguish domain-invariant features, or by classifier adaptation to evolve the classifier to recognize target-styled source features to increase its adaptation ability. However, by learning domain-invariant features, feature extractor adaptation methods fail to encode semantically meaningful target-specific information, while classifier adaptation methods rely heavily on the accurate estimation of the target distribution. In this work, we propose a novel framework that deeply couples the classifier and feature extractor adaption for 3D UDA, dubbed Progressive Classifier and Feature Extractor Adaptation (PCFEA). Our PCFEA conducts 3D UDA from two distinct perspectives: macro and micro levels. On the macro level, we propose a progressive target-styled feature augmentation (PTFA) that establishes a series of intermediate domains to enable the model to progressively adapt to the target domain. Throughout this process, the source classifier is evolved to recognize target-styled source features (\ie, classifier adaptation). On the micro level, we develop an intermediate domain feature extractor adaptation (IDFA) that performs a compact feature alignment to encourage the target-styled feature extraction gradually. In this way, PTFA and IDFA can mutually benefit each other: IDFA contributes to the distribution estimation of PTFA while PTFA constructs smoother intermediate domains to encourage an accurate feature alignment of IDFA. We validate our method on popular benchmark datasets, where our method achieves new state-of-the-art performance. Our code is available at https://github.com/xiaoyao3302/PCFEA.

cs.CV↗

arXiv2024

Alternate Diverse Teaching for Semi-supervised Medical Image Segmentation

Semi-supervised medical image segmentation studies have shown promise in training models with limited labeled data. However, current dominant teacher-student based approaches can suffer from the confirmation bias. To address this challenge, we propose AD-MT, an alternate diverse teaching approach in a teacher-student framework. It involves a single student model and two non-trainable teacher models that are momentum-updated periodically and randomly in an alternate fashion. To mitigate the confirmation bias from the diverse supervision, the core of AD-MT lies in two proposed modules: the Random Periodic Alternate (RPA) Updating Module and the Conflict-Combating Module (CCM). The RPA schedules the alternating diverse updating process with complementary data batches, distinct data augmentation, and random switching periods to encourage diverse reasoning from different teaching perspectives. The CCM employs an entropy-based ensembling strategy to encourage the model to learn from both the consistent and conflicting predictions between the teachers. Experimental results demonstrate the effectiveness and superiority of our AD-MT on the 2D and 3D medical segmentation benchmarks across various semi-supervised settings.

cs.CV↗

arXiv2024

PoinTramba: A Hybrid Transformer-Mamba Framework for Point Cloud Analysis

Point cloud analysis has seen substantial advancements due to deep learning, although previous Transformer-based methods excel at modeling long-range dependencies on this task, their computational demands are substantial. Conversely, the Mamba offers greater efficiency but shows limited potential compared with Transformer-based methods. In this study, we introduce PoinTramba, a pioneering hybrid framework that synergies the analytical power of Transformer with the remarkable computational efficiency of Mamba for enhanced point cloud analysis. Specifically, our approach first segments point clouds into groups, where the Transformer meticulously captures intricate intra-group dependencies and produces group embeddings, whose inter-group relationships will be simultaneously and adeptly captured by efficient Mamba architecture, ensuring comprehensive analysis. Unlike previous Mamba approaches, we introduce a bi-directional importance-aware ordering (BIO) strategy to tackle the challenges of random ordering effects. This innovative strategy intelligently reorders group embeddings based on their calculated importance scores, significantly enhancing Mamba's performance and optimizing the overall analytical process. Our framework achieves a superior balance between computational efficiency and analytical performance by seamlessly integrating these advanced techniques, marking a substantial leap forward in point cloud analysis. Extensive experiments on datasets such as ScanObjectNN, ModelNet40, and ShapeNetPart demonstrate the effectiveness of our approach, establishing a new state-of-the-art analysis benchmark on point cloud recognition. For the first time, this paradigm leverages the combined strengths of both Transformer and Mamba architectures, facilitating a new standard in the field. The code is available at https://github.com/xiaoyao3302/PoinTramba.

cs.CV↗

arXiv2024

LighTDiff: Surgical Endoscopic Image Low-Light Enhancement with T-Diffusion

Advances in endoscopy use in surgeries face challenges like inadequate lighting. Deep learning, notably the Denoising Diffusion Probabilistic Model (DDPM), holds promise for low-light image enhancement in the medical field. However, DDPMs are computationally demanding and slow, limiting their practical medical applications. To bridge this gap, we propose a lightweight DDPM, dubbed LighTDiff. It adopts a T-shape model architecture to capture global structural information using low-resolution images and gradually recover the details in subsequent denoising steps. We further prone the model to significantly reduce the model size while retaining performance. While discarding certain downsampling operations to save parameters leads to instability and low efficiency in convergence during the training, we introduce a Temporal Light Unit (TLU), a plug-and-play module, for more stable training and better performance. TLU associates time steps with denoised image features, establishing temporal dependencies of the denoising steps and improving denoising outcomes. Moreover, while recovering images using the diffusion model, potential spectral shifts were noted. We further introduce a Chroma Balancer (CB) to mitigate this issue. Our LighTDiff outperforms many competitive LLIE methods with exceptional computational efficiency.

eess.IV↗

arXiv2024

MedXChat: A Unified Multimodal Large Language Model Framework towards CXRs Understanding and Generation

Multimodal Large Language Models (MLLMs) have shown success in various general image processing tasks, yet their application in medical imaging is nascent, lacking tailored models. This study investigates the potential of MLLMs in improving the understanding and generation of Chest X-Rays (CXRs). We introduce MedXChat, a unified framework facilitating seamless interactions between medical assistants and users for diverse CXR tasks, including text report generation, visual question-answering (VQA), and Text-to-CXR generation. Our MLLMs using natural language as the input breaks task boundaries, maximally simplifying medical professional training by allowing diverse tasks within a single environment. For CXR understanding, we leverage powerful off-the-shelf visual encoders (e.g., ViT) and LLMs (e.g., mPLUG-Owl) to convert medical imagery into language-like features, and subsequently fine-tune our large pre-trained models for medical applications using a visual adapter network and a delta-tuning approach. For CXR generation, we introduce an innovative synthesis approach that utilizes instruction-following capabilities within the Stable Diffusion (SD) architecture. This technique integrates smoothly with the existing model framework, requiring no extra parameters, thereby maintaining the SD's generative strength while also bestowing upon it the capacity to render fine-grained medical images with high fidelity. Through comprehensive experiments, our model demonstrates exceptional cross-task adaptability, displaying adeptness across all three defined tasks. Our MedXChat model and the instruction dataset utilized in this research will be made publicly available to encourage further exploration in the field.

cs.CV↗

arXiv2024

MRScore: Evaluating Radiology Report Generation with LLM-based Reward System

In recent years, automated radiology report generation has experienced significant growth. This paper introduces MRScore, an automatic evaluation metric tailored for radiology report generation by leveraging Large Language Models (LLMs). Conventional NLG (natural language generation) metrics like BLEU are inadequate for accurately assessing the generated radiology reports, as systematically demonstrated by our observations within this paper. To address this challenge, we collaborated with radiologists to develop a framework that guides LLMs for radiology report evaluation, ensuring alignment with human analysis. Our framework includes two key components: i) utilizing GPT to generate large amounts of training data, i.e., reports with different qualities, and ii) pairing GPT-generated reports as accepted and rejected samples and training LLMs to produce MRScore as the model reward. Our experiments demonstrate MRScore's higher correlation with human judgments and superior performance in model selection compared to traditional metrics. Our code and datasets will be available on GitHub.

cs.CL↗

arXiv2024

A deep neural network for positioning and inter-crystal scatter identification in multiplexed PET detectors

Objective: Conventional event positioning algorithms in light-sharing PET detectors are often limited by edge effects and the impact of inter-crystal scattering (ICS). This study explores the feasibility of deep neural network (DNN) techniques for more precise event positioning in finely segmented and highly multiplexed PET detectors with light-sharing. Approach: A DNN was designed for crystal localisation, and trained/tested with light distributions of photoelectric (P) and Compton/photoelectric (CP) events simulated using optical GATE and an efficient analytical method. Using the statistical properties of ICS events from simulation, an energy-guided positioning algorithm was built into the DNN, enabling selection of the unique or first crystal of interaction in P and CP events, respectively. Performance of the DNN was compared with Anger logic using light distributions from simulated 511-keV point sources near the PET detector. Results: Despite coarse photodetector data due to signal multiplexing, the DNN demonstrated a crystal classification accuracy of 90% for P events and 82% for CP events. For crystal positioning, the DNN outperformed Anger logic by at least 34% and 14% for P and CP events, respectively. Further improvement is somewhat constrained by the physics, specifically, the ratio of backward to forward scattering of gamma rays within the crystal array being close to 1. This prevents selecting the first crystal of interaction in CP events with a high degree of certainty. Significance: Light-sharing and multiplexed PET detectors are common in high-resolution PET, yet event positioning can be poor due to edge effects and ICS events. Our study shows that DNN-based event positioning can enhance 2D coincidence event positioning accuracy by nearly a factor of 2 compared to Anger logic. However, further improvements are difficult to foresee without timing information.

physics.med-ph↗

arXiv2024

A survey on efficient vision transformers: algorithms, techniques, and performance benchmarking

Vision Transformer (ViT) architectures are becoming increasingly popular and widely employed to tackle computer vision applications. Their main feature is the capacity to extract global information through the self-attention mechanism, outperforming earlier convolutional neural networks. However, ViT deployment and performance have grown steadily with their size, number of trainable parameters, and operations. Furthermore, self-attention's computational and memory cost quadratically increases with the image resolution. Generally speaking, it is challenging to employ these architectures in real-world applications due to many hardware and environmental restrictions, such as processing and computational capabilities. Therefore, this survey investigates the most efficient methodologies to ensure sub-optimal estimation performances. More in detail, four efficient categories will be analyzed: compact architecture, pruning, knowledge distillation, and quantization strategies. Moreover, a new metric called Efficient Error Rate has been introduced in order to normalize and compare models' features that affect hardware devices at inference time, such as the number of parameters, bits, FLOPs, and model size. Summarizing, this paper firstly mathematically defines the strategies used to make Vision Transformer efficient, describes and discusses state-of-the-art methodologies, and analyzes their performances over different application scenarios. Toward the end of this paper, we also discuss open challenges and promising research directions.

cs.CV↗

arXiv2024

A Systematic Evaluation of GPT-4V's Multimodal Capability for Medical Image Analysis

This work conducts an evaluation of GPT-4V's multimodal capability for medical image analysis, with a focus on three representative tasks of radiology report generation, medical visual question answering, and medical visual grounding. For the evaluation, a set of prompts is designed for each task to induce the corresponding capability of GPT-4V to produce sufficiently good outputs. Three evaluation ways including quantitative analysis, human evaluation, and case study are employed to achieve an in-depth and extensive evaluation. Our evaluation shows that GPT-4V excels in understanding medical images and is able to generate high-quality radiology reports and effectively answer questions about medical images. Meanwhile, it is found that its performance for medical visual grounding needs to be substantially improved. In addition, we observe the discrepancy between the evaluation outcome from quantitative analysis and that from human evaluation. This discrepancy suggests the limitations of conventional metrics in assessing the performance of large language models like GPT-4V and the necessity of developing new metrics for automatic quantitative analysis.

cs.CV↗

arXiv2023

UFDA: Universal Federated Domain Adaptation with Practical Assumptions

Conventional Federated Domain Adaptation (FDA) approaches usually demand an abundance of assumptions, which makes them significantly less feasible for real-world situations and introduces security hazards. This paper relaxes the assumptions from previous FDAs and studies a more practical scenario named Universal Federated Domain Adaptation (UFDA). It only requires the black-box model and the label set information of each source domain, while the label sets of different source domains could be inconsistent, and the target-domain label set is totally blind. Towards a more effective solution for our newly proposed UFDA scenario, we propose a corresponding methodology called Hot-Learning with Contrastive Label Disambiguation (HCLD). It particularly tackles UFDA's domain shifts and category gaps problems by using one-hot outputs from the black-box models of various source domains. Moreover, to better distinguish the shared and unknown classes, we further present a cluster-level strategy named Mutual-Voting Decision (MVD) to extract robust consensus knowledge across peer classes from both source and target domains. Extensive experiments on three benchmark datasets demonstrate that our method achieves comparable performance for our UFDA scenario with much fewer assumptions, compared to previous methodologies with comprehensive additional assumptions.

cs.LG↗

arXiv2023

Roll With the Punches: Expansion and Shrinkage of Soft Label Selection for Semi-supervised Fine-Grained Learning

While semi-supervised learning (SSL) has yielded promising results, the more realistic SSL scenario remains to be explored, in which the unlabeled data exhibits extremely high recognition difficulty, e.g., fine-grained visual classification in the context of SSL (SS-FGVC). The increased recognition difficulty on fine-grained unlabeled data spells disaster for pseudo-labeling accuracy, resulting in poor performance of the SSL model. To tackle this challenge, we propose Soft Label Selection with Confidence-Aware Clustering based on Class Transition Tracking (SoC) by reconstructing the pseudo-label selection process by jointly optimizing Expansion Objective and Shrinkage Objective, which is based on a soft label manner. Respectively, the former objective encourages soft labels to absorb more candidate classes to ensure the attendance of ground-truth class, while the latter encourages soft labels to reject more noisy classes, which is theoretically proved to be equivalent to entropy minimization. In comparisons with various state-of-the-art methods, our approach demonstrates its superior performance in SS-FGVC. Checkpoints and source code are available at https://github.com/NJUyued/SoC4SS-FGVC.

cs.LG↗

arXiv2023

Understanding Masked Autoencoders From a Local Contrastive Perspective

Masked AutoEncoder (MAE) has revolutionized the field of self-supervised learning with its simple yet effective masking and reconstruction strategies. However, despite achieving state-of-the-art performance across various downstream vision tasks, the underlying mechanisms that drive MAE's efficacy are less well-explored compared to the canonical contrastive learning paradigm. In this paper, we first propose a local perspective to explicitly extract a local contrastive form from MAE's reconstructive objective at the patch level. And then we introduce a new empirical framework, called Local Contrastive MAE (LC-MAE), to analyze both reconstructive and contrastive aspects of MAE. LC-MAE reveals that MAE learns invariance to random masking and ensures distribution consistency between the learned token embeddings and the original images. Furthermore, we dissect the contribution of the decoder and random masking to MAE's success, revealing both the decoder's learning mechanism and the dual role of random masking as data augmentation and effective receptive field restriction. Our experimental analysis sheds light on the intricacies of MAE and summarizes some useful design methodologies, which can inspire more powerful visual self-supervised methods.

cs.CV↗

arXiv2023

Clean Label Disentangling for Medical Image Segmentation with Noisy Labels

Current methods focusing on medical image segmentation suffer from incorrect annotations, which is known as the noisy label issue. Most medical image segmentation with noisy labels methods utilize either noise transition matrix, noise-robust loss functions or pseudo-labeling methods, while none of the current research focuses on clean label disentanglement. We argue that the main reason is that the severe class-imbalanced issue will lead to the inaccuracy of the selected ``clean'' labels, thus influencing the robustness of the model against the noises. In this work, we come up with a simple but efficient class-balanced sampling strategy to tackle the class-imbalanced problem, which enables our newly proposed clean label disentangling framework to successfully select clean labels from the given label sets and encourages the model to learn from the correct annotations. However, such a method will filter out too many annotations which may also contain useful information. Therefore, we further extend our clean label disentangling framework to a new noisy feature-aided clean label disentangling framework, which takes the full annotations into utilization to learn more semantics. Extensive experiments have validated the effectiveness of our methods, where our methods achieve new state-of-the-art performance. Our code is available at https://github.com/xiaoyao3302/2BDenoise.

cs.CV↗

arXiv2023

R2GenGPT: Radiology Report Generation with Frozen LLMs

Large Language Models (LLMs) have consistently showcased remarkable generalization capabilities when applied to various language tasks. Nonetheless, harnessing the full potential of LLMs for Radiology Report Generation (R2Gen) still presents a challenge, stemming from the inherent disparity in modality between LLMs and the R2Gen task. To bridge this gap effectively, we propose R2GenGPT, which is a novel solution that aligns visual features with the word embedding space of LLMs using an efficient visual alignment module. This innovative approach empowers the previously static LLM to seamlessly integrate and process image information, marking a step forward in optimizing R2Gen performance. R2GenGPT offers the following benefits. First, it attains state-of-the-art (SOTA) performance by training only the lightweight visual alignment module while freezing all the parameters of LLM. Second, it exhibits high training efficiency, as it requires the training of an exceptionally minimal number of parameters while achieving rapid convergence. By employing delta tuning, our model only trains 5M parameters (which constitute just 0.07\% of the total parameter count) to achieve performance close to the SOTA levels. Our code is available at https://github.com/wang-zhanyu/R2GenGPT.

cs.CV↗

arXiv2023

Enhancing Sample Utilization through Sample Adaptive Augmentation in Semi-Supervised Learning

In semi-supervised learning, unlabeled samples can be utilized through augmentation and consistency regularization. However, we observed certain samples, even undergoing strong augmentation, are still correctly classified with high confidence, resulting in a loss close to zero. It indicates that these samples have been already learned well and do not provide any additional optimization benefits to the model. We refer to these samples as ``naive samples". Unfortunately, existing SSL models overlook the characteristics of naive samples, and they just apply the same learning strategy to all samples. To further optimize the SSL model, we emphasize the importance of giving attention to naive samples and augmenting them in a more diverse manner. Sample adaptive augmentation (SAA) is proposed for this stated purpose and consists of two modules: 1) sample selection module; 2) sample augmentation module. Specifically, the sample selection module picks out {naive samples} based on historical training information at each epoch, then the naive samples will be augmented in a more diverse manner in the sample augmentation module. Thanks to the extreme ease of implementation of the above modules, SAA is advantageous for being simple and lightweight. We add SAA on top of FixMatch and FlexMatch respectively, and experiments demonstrate SAA can significantly improve the models. For example, SAA helped improve the accuracy of FixMatch from 92.50% to 94.76% and that of FlexMatch from 95.01% to 95.31% on CIFAR-10 with 40 labels.

cs.CV↗

arXiv2023

Neural Vector Fields: Generalizing Distance Vector Fields by Codebooks and Zero-Curl Regularization

Recent neural networks based surface reconstruction can be roughly divided into two categories, one warping templates explicitly and the other representing 3D surfaces implicitly. To enjoy the advantages of both, we propose a novel 3D representation, Neural Vector Fields (NVF), which adopts the explicit learning process to manipulate meshes and implicit unsigned distance function (UDF) representation to break the barriers in resolution and topology. This is achieved by directly predicting the displacements from surface queries and modeling shapes as Vector Fields, rather than relying on network differentiation to obtain direction fields as most existing UDF-based methods do. In this way, our approach is capable of encoding both the distance and the direction fields so that the calculation of direction fields is differentiation-free, circumventing the non-trivial surface extraction step. Furthermore, building upon NVFs, we propose to incorporate two types of shape codebooks, \ie, NVFs (Lite or Ultra), to promote cross-category reconstruction through encoding cross-object priors. Moreover, we propose a new regularization based on analyzing the zero-curl property of NVFs, and implement this through the fully differentiable framework of our NVF (ultra). We evaluate both NVFs on four surface reconstruction scenarios, including watertight vs non-watertight shapes, category-agnostic reconstruction vs category-unseen reconstruction, category-specific, and cross-domain reconstruction.

cs.CV↗