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Marko Robnik-Šikonja

Publications and source records attributed to Marko Robnik-Šikonja.

At least 19 recordsLinked to original sources

Detecting Spin in Clinical Trials with Large Language Models

Spin in clinical trials includes reporting practices that distort the presentation of results. This is particularly critical in medicine, where spin is present in more than 50% of randomized controlled trials that fail to reach statistical significance. The comparison of primary and reported outcomes is crucial for detecting several types of spin, including outcome switching. We used 300 pairs of outcomes labeled with semantic similarity to develop a system for automatic detection of outcome switching. We evaluated baseline text similarity models and open-source LLMs using generated similarity scores and the Youden index to determine the classification threshold. The proposed approach involves prompt engineering, classification based on token probabilities, and majority voting for the final decision. The results on the test set of 2,496 examples with an F1 score of 0.78 and an accuracy of 0.90 outperform baseline text similarity models but trail behind fine-tuned versions of BERT. We used LLMs to generate natural language explanations for the classified instances and manually assessed their quality.

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Incremental Graph Construction Enables Robust Spectral Clustering of Texts

Neighborhood graphs are a critical but often fragile step in spectral clustering of text embeddings. On realistic text datasets, standard $k$-NN graphs can contain many disconnected components at practical sparsity levels (small $k$), making spectral clustering degenerate and sensitive to hyperparameters. We introduce a simple incremental $k$-NN graph construction that preserves connectivity by design: each new node is linked to its $k$ nearest previously inserted nodes, which guarantees a connected graph for any $k$. We provide an inductive proof of connectedness and discuss implications for incremental updates when new documents arrive. We validate the approach on spectral clustering of SentenceTransformer embeddings using Laplacian eigenmaps across six clustering datasets from the Massive Text Embedding Benchmark. Compared to standard $k$-NN graphs, our method outperforms in the low-$k$ regime where disconnected components are prevalent, and matches standard $k$-NN at larger $k$.

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Building a Strong Instruction Language Model for a Less-Resourced Language

Large language models (LLMs) have become an essential tool for natural language processing and artificial intelligence in general. Current open-source models are primarily trained on English texts, resulting in poorer performance on less-resourced languages and cultures. We present a set of methodological approaches necessary for the successful adaptation of an LLM to a less-resourced language, and demonstrate them using the Slovene language. We present GaMS3-12B, a generative model for Slovene with 12 billion parameters, and demonstrate that it is the best-performing open-source model for Slovene within its parameter range. We adapted the model to the Slovene language using three-stage continual pre-training of the Gemma 3 model, followed by two-stage supervised fine-tuning (SFT). We trained the model on a combination of 140B Slovene, English, Bosnian, Serbian, and Croatian pretraining tokens, and over 200 thousand English and Slovene SFT examples. We evaluate GaMS3-12B on the Slovenian-LLM-Eval datasets, English-to-Slovene translation, and the Slovene LLM arena. We show that the described model outperforms 12B Gemma 3 across all three scenarios and performs comparably to much larger commercial GPT-4o in the Slovene LLM arena, achieving a win rate of over 60 %.

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Evaluating Metalinguistic Knowledge in Large Language Models across the World's Languages

LLMs are routinely evaluated on language use, yet their explicit knowledge about linguistic structure remains poorly understood. Existing linguistic benchmarks focus on narrow phenomena, emphasize high-resource languages, and rarely test metalinguistic knowledge - explicit reasoning about language structure. We present a multilingual evaluation of metalinguistic knowledge in LLMs, based on the World Atlas of Language Structures (WALS), documenting 192 linguistic features across 2,660 languages. We convert WALS features into natural-language multiple-choice questions and evaluate models across documented languages. Using accuracy and macro F1, and comparing to chance and majority-class baselines, we assess performance and analyse variation across linguistic domains and language-related factors. Results show limited metalinguistic knowledge: GPT-4o performs best but achieves moderate accuracy (0.367), while open-source models lag. Although all models perform above chance, they fail to outperform the majority-class baseline, suggesting they capture broad cross-linguistic patterns but lack fine-grained distinctions. Performance varies by domain, partly reflecting differences in online visibility. At the language level, accuracy correlates with digital language status: languages with greater digital presence and resources are evaluated more accurately, while low-resource languages perform worse. Analysis of predictive factors confirms that resource-related indicators (Wikipedia size, corpus availability) are more informative than geographic, genealogical, or sociolinguistic factors. Overall, LLM metalinguistic knowledge appears fragmented and shaped mainly by data availability, rather than broadly generalizable grammatical competence. We release the benchmark as an open-source dataset to support evaluation across languages and encourage greater global linguistic diversity in future LLMs.

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Towards Corpus-Grounded Agentic LLMs for Multilingual Grammatical Analysis

Empirical grammar research has become increasingly data-driven, but the systematic analysis of annotated corpora still requires substantial methodological and technical effort. We explore how agentic large language models (LLMs) can streamline this process by reasoning over annotated corpora and producing interpretable, data-grounded answers to linguistic questions. We introduce an agentic framework for corpus-grounded grammatical analysis that integrates concepts such as natural-language task interpretation, code generation, and data-driven reasoning. As a proof of concept, we apply it to Universal Dependencies (UD) corpora, testing it on multilingual grammatical tasks inspired by the World Atlas of Language Structures (WALS). The evaluation spans 13 word-order features and over 170 languages, assessing system performance across three complementary dimensions - dominant-order accuracy, order-coverage completeness, and distributional fidelity - which reflect how well the system generalizes, identifies, and quantifies word-order variations. The results demonstrate the feasibility of combining LLM reasoning with structured linguistic data, offering a first step toward interpretable, scalable automation of corpus-based grammatical inquiry.

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Large language models for folktale type automation based on motifs: Cinderella case study

Artificial intelligence approaches are being adapted to many research areas, including digital humanities. We built a methodology for large-scale analyses in folkloristics. Using machine learning and natural language processing, we automatically detected motifs in a large collection of Cinderella variants and analysed their similarities and differences with clustering and dimensionality reduction. The results show that large language models detect complex interactions in tales, enabling computational analysis of extensive text collections and facilitating cross-lingual comparisons.

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Improving LLMs for Machine Translation Using Synthetic Preference Data

Large language models have emerged as effective machine translation systems. In this paper, we explore how a general instruction-tuned large language model can be improved for machine translation using relatively few easily produced data resources. Using Slovene as a use case, we improve the GaMS-9B-Instruct model using Direct Preference Optimization (DPO) training on a programmatically curated and enhanced subset of a public dataset. As DPO requires pairs of quality-ranked instances, we generated its training dataset by translating English Wikipedia articles using two LLMs, GaMS-9B-Instruct and EuroLLM-9B-Instruct. We ranked the resulting translations based on heuristics coupled with automatic evaluation metrics such as COMET. The evaluation shows that our fine-tuned model outperforms both models involved in the dataset generation. In comparison to the baseline models, the fine-tuned model achieved a COMET score gain of around 0.04 and 0.02, respectively, on translating Wikipedia articles. It also more consistently avoids language and formatting errors.

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Real-time News Story Identification

To improve the reading experience, many news sites organize news into topical collections, called stories. In this work, we present an approach for implementing real-time story identification for a news monitoring system that automatically collects news articles as they appear online and processes them in various ways. Story identification aims to assign each news article to a specific story that the article is covering. The process is similar to text clustering and topic modeling, but requires that articles be grouped based on particular events, places, and people, rather than general text similarity (as in clustering) or general (predefined) topics (as in topic modeling). We present an approach to story identification that is capable of functioning in real time, assigning articles to stories as they are published online. In the proposed approach, we combine text representation techniques, clustering algorithms, and online topic modeling methods. We combine various text representation methods to extract specific events and named entities necessary for story identification, showing that a mixture of online topic-modeling approaches such as BERTopic, DBStream, and TextClust can be adapted for story discovery. We evaluate our approach on a news dataset from Slovene media covering a period of 1 month. We show that our real-time approach produces sensible results as judged by human evaluators.

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Retrieval-augmented code completion for local projects using large language models

The use of large language models (LLMs) is becoming increasingly widespread among software developers. However, privacy and computational requirements are problematic with commercial solutions and the use of LLMs. In this work, we focus on using relatively small and efficient LLMs with 160M parameters that are suitable for local execution and augmentation with retrieval from local projects. We train two open transformer-based models, the generative GPT-2 and the retrieval-adapted RETRO, on open-source Python files, and empirically compare them, confirming the benefits of embedding-based retrieval. Furthermore, we improve our models' performance with In-context retrieval-augmented generation (RAG), which retrieves code snippets using the Jaccard similarity of tokens. We evaluate In-context RAG on larger models and determine that, despite its simplicity, the approach is more suitable than using the RETRO architecture. Experimental results indicate that In-context RAG improves the code completion baseline by over 26%, while RETRO improves over the similarly sized GPT-2 baseline by 12%. We highlight the key role of proper tokenization in achieving the full potential of LLMs in code completion.

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Solving Word-Sense Disambiguation and Word-Sense Induction with Dictionary Examples

Many less-resourced languages struggle with a lack of large, task-specific datasets that are required for solving relevant tasks with modern transformer-based large language models (LLMs). On the other hand, many linguistic resources, such as dictionaries, are rarely used in this context despite their large information contents. We show how LLMs can be used to extend existing language resources in less-resourced languages for two important tasks: word-sense disambiguation (WSD) and word-sense induction (WSI). We approach the two tasks through the related but much more accessible word-in-context (WiC) task where, given a pair of sentences and a target word, a classification model is tasked with predicting whether the sense of a given word differs between sentences. We demonstrate that a well-trained model for this task can distinguish between different word senses and can be adapted to solve the WSD and WSI tasks. The advantage of using the WiC task, instead of directly predicting senses, is that the WiC task does not need pre-constructed sense inventories with a sufficient number of examples for each sense, which are rarely available in less-resourced languages. We show that sentence pairs for the WiC task can be successfully generated from dictionary examples using LLMs. The resulting prediction models outperform existing models on WiC, WSD, and WSI tasks. We demonstrate our methodology on the Slovene language, where a monolingual dictionary is available, but word-sense resources are tiny.

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Measuring Catastrophic Forgetting in Cross-Lingual Transfer Paradigms: Exploring Tuning Strategies

The cross-lingual transfer is a promising technique to solve tasks in less-resourced languages. In this empirical study, we compare two fine-tuning approaches combined with zero-shot and full-shot learning approaches for large language models in a cross-lingual setting. As fine-tuning strategies, we compare parameter-efficient adapter methods with fine-tuning of all parameters. As cross-lingual transfer strategies, we compare the intermediate-training (\textit{IT}) that uses each language sequentially and cross-lingual validation (\textit{CLV}) that uses a target language already in the validation phase of fine-tuning. We assess the success of transfer and the extent of catastrophic forgetting in a source language due to cross-lingual transfer, i.e., how much previously acquired knowledge is lost when we learn new information in a different language. The results on two different classification problems, hate speech detection and product reviews, each containing datasets in several languages, show that the \textit{IT} cross-lingual strategy outperforms \textit{CLV} for the target language. Our findings indicate that, in the majority of cases, the \textit{CLV} strategy demonstrates superior retention of knowledge in the base language (English) compared to the \textit{IT} strategy, when evaluating catastrophic forgetting in multiple cross-lingual transfers.

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Neural spell-checker: Beyond words with synthetic data generation

Spell-checkers are valuable tools that enhance communication by identifying misspelled words in written texts. Recent improvements in deep learning, and in particular in large language models, have opened new opportunities to improve traditional spell-checkers with new functionalities that not only assess spelling correctness but also the suitability of a word for a given context. In our work, we present and compare two new spell-checkers and evaluate them on synthetic, learner, and more general-domain Slovene datasets. The first spell-checker is a traditional, fast, word-based approach, based on a morphological lexicon with a significantly larger word list compared to existing spell-checkers. The second approach uses a language model trained on a large corpus with synthetically inserted errors. We present the training data construction strategies, which turn out to be a crucial component of neural spell-checkers. Further, the proposed neural model significantly outperforms all existing spell-checkers for Slovene in both precision and recall.

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Sarcasm Detection in a Less-Resourced Language

The sarcasm detection task in natural language processing tries to classify whether an utterance is sarcastic or not. It is related to sentiment analysis since it often inverts surface sentiment. Because sarcastic sentences are highly dependent on context, and they are often accompanied by various non-verbal cues, the task is challenging. Most of related work focuses on high-resourced languages like English. To build a sarcasm detection dataset for a less-resourced language, such as Slovenian, we leverage two modern techniques: a machine translation specific medium-size transformer model, and a very large generative language model. We explore the viability of translated datasets and how the size of a pretrained transformer affects its ability to detect sarcasm. We train ensembles of detection models and evaluate models' performance. The results show that larger models generally outperform smaller ones and that ensembling can slightly improve sarcasm detection performance. Our best ensemble approach achieves an $\text{F}_1$-score of 0.765 which is close to annotators' agreement in the source language.

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Generative Model for Less-Resourced Language with 1 billion parameters

Large language models (LLMs) are a basic infrastructure for modern natural language processing. Many commercial and open-source LLMs exist for English, e.g., ChatGPT, Llama, Falcon, and Mistral. As these models are trained on mostly English texts, their fluency and knowledge of low-resource languages and societies are superficial. We present the development of large generative language models for a less-resourced language. GaMS 1B - Generative Model for Slovene with 1 billion parameters was created by continuing pretraining of the existing English OPT model. We developed a new tokenizer adapted to Slovene, Croatian, and English languages and used embedding initialization methods FOCUS and WECHSEL to transfer the embeddings from the English OPT model. We evaluate our models on several classification datasets from the Slovene suite of benchmarks and generative sentence simplification task SENTA. We only used a few-shot in-context learning of our models, which are not yet instruction-tuned. For classification tasks, in this mode, the generative models lag behind the existing Slovene BERT-type models fine-tuned for specific tasks. On a sentence simplification task, the GaMS models achieve comparable or better performance than the GPT-3.5-Turbo model.

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One model to rule them all: ranking Slovene summarizers

Text summarization is an essential task in natural language processing, and researchers have developed various approaches over the years, ranging from rule-based systems to neural networks. However, there is no single model or approach that performs well on every type of text. We propose a system that recommends the most suitable summarization model for a given text. The proposed system employs a fully connected neural network that analyzes the input content and predicts which summarizer should score the best in terms of ROUGE score for a given input. The meta-model selects among four different summarization models, developed for the Slovene language, using different properties of the input, in particular its Doc2Vec document representation. The four Slovene summarization models deal with different challenges associated with text summarization in a less-resourced language. We evaluate the proposed SloMetaSum model performance automatically and parts of it manually. The results show that the system successfully automates the step of manually selecting the best model.

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XAI in Computational Linguistics: Understanding Political Leanings in the Slovenian Parliament

The work covers the development and explainability of machine learning models for predicting political leanings through parliamentary transcriptions. We concentrate on the Slovenian parliament and the heated debate on the European migrant crisis, with transcriptions from 2014 to 2020. We develop both classical machine learning and transformer language models to predict the left- or right-leaning of parliamentarians based on their given speeches on the topic of migrants. With both types of models showing great predictive success, we continue with explaining their decisions. Using explainability techniques, we identify keywords and phrases that have the strongest influence in predicting political leanings on the topic, with left-leaning parliamentarians using concepts such as people and unity and speak about refugees, and right-leaning parliamentarians using concepts such as nationality and focus more on illegal migrants. This research is an example that understanding the reasoning behind predictions can not just be beneficial for AI engineers to improve their models, but it can also be helpful as a tool in the qualitative analysis steps in interdisciplinary research.

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Review of Natural Language Processing in Pharmacology

Natural language processing (NLP) is an area of artificial intelligence that applies information technologies to process the human language, understand it to a certain degree, and use it in various applications. This area has rapidly developed in the last few years and now employs modern variants of deep neural networks to extract relevant patterns from large text corpora. The main objective of this work is to survey the recent use of NLP in the field of pharmacology. As our work shows, NLP is a highly relevant information extraction and processing approach for pharmacology. It has been used extensively, from intelligent searches through thousands of medical documents to finding traces of adversarial drug interactions in social media. We split our coverage into five categories to survey modern NLP methodology, commonly addressed tasks, relevant textual data, knowledge bases, and useful programming libraries. We split each of the five categories into appropriate subcategories, describe their main properties and ideas, and summarize them in a tabular form. The resulting survey presents a comprehensive overview of the area, useful to practitioners and interested observers.

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Feature construction using explanations of individual predictions

Feature construction can contribute to comprehensibility and performance of machine learning models. Unfortunately, it usually requires exhaustive search in the attribute space or time-consuming human involvement to generate meaningful features. We propose a novel heuristic approach for reducing the search space based on aggregation of instance-based explanations of predictive models. The proposed Explainable Feature Construction (EFC) methodology identifies groups of co-occurring attributes exposed by popular explanation methods, such as IME and SHAP. We empirically show that reducing the search to these groups significantly reduces the time of feature construction using logical, relational, Cartesian, numerical, and threshold num-of-N and X-of-N constructive operators. An analysis on 10 transparent synthetic datasets shows that EFC effectively identifies informative groups of attributes and constructs relevant features. Using 30 real-world classification datasets, we show significant improvements in classification accuracy for several classifiers and demonstrate the feasibility of the proposed feature construction even for large datasets. Finally, EFC generated interpretable features on a real-world problem from the financial industry, which were confirmed by a domain expert.

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