arXiv subjects

Michael J. Franklin

Publications and source records attributed to Michael J. Franklin.

At least 19 recordsLinked to original sources

arXiv2025

VUS: Effective and Efficient Accuracy Measures for Time-Series Anomaly Detection

Anomaly detection (AD) is a fundamental task for time-series analytics with important implications for the downstream performance of many applications. In contrast to other domains where AD mainly focuses on point-based anomalies (i.e., outliers in standalone observations), AD for time series is also concerned with range-based anomalies (i.e., outliers spanning multiple observations). Nevertheless, it is common to use traditional point-based information retrieval measures, such as Precision, Recall, and F-score, to assess the quality of methods by thresholding the anomaly score to mark each point as an anomaly or not. However, mapping discrete labels into continuous data introduces unavoidable shortcomings, complicating the evaluation of range-based anomalies. Notably, the choice of evaluation measure may significantly bias the experimental outcome. Despite over six decades of attention, there has never been a large-scale systematic quantitative and qualitative analysis of time-series AD evaluation measures. This paper extensively evaluates quality measures for time-series AD to assess their robustness under noise, misalignments, and different anomaly cardinality ratios. Our results indicate that measures producing quality values independently of a threshold (i.e., AUC-ROC and AUC-PR) are more suitable for time-series AD. Motivated by this observation, we first extend the AUC-based measures to account for range-based anomalies. Then, we introduce a new family of parameter-free and threshold-independent measures, Volume Under the Surface (VUS), to evaluate methods while varying parameters. We also introduce two optimized implementations for VUS that reduce significantly the execution time of the initial implementation. Our findings demonstrate that our four measures are significantly more robust in assessing the quality of time-series AD methods.

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arXiv2021

Understanding and Optimizing Packed Neural Network Training for Hyper-Parameter Tuning

As neural networks are increasingly employed in machine learning practice, how to efficiently share limited training resources among a diverse set of model training tasks becomes a crucial issue. To achieve better utilization of the shared resources, we explore the idea of jointly training multiple neural network models on a single GPU in this paper. We realize this idea by proposing a primitive, called pack. We further present a comprehensive empirical study of pack and end-to-end experiments that suggest significant improvements for hyperparameter tuning. The results suggest: (1) packing two models can bring up to 40% performance improvement over unpacked setups for a single training step and the improvement increases when packing more models; (2) the benefit of the pack primitive largely depends on a number of factors including memory capacity, chip architecture, neural network structure, and batch size; (3) there exists a trade-off between packing and unpacking when training multiple neural network models on limited resources; (4) a pack-aware Hyperband is up to 2.7x faster than the original Hyperband, with this improvement growing as memory size increases and subsequently the density of models packed.

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arXiv2020

Data Market Platforms: Trading Data Assets to Solve Data Problems

Data only generates value for a few organizations with expertise and resources to make data shareable, discoverable, and easy to integrate. Sharing data that is easy to discover and integrate is hard because data owners lack information (who needs what data) and they do not have incentives to prepare the data in a way that is easy to consume by others. In this paper, we propose data market platforms to address the lack of information and incentives and tackle the problems of data sharing, discovery, and integration. In a data market platform, data owners want to share data because they will be rewarded if they do so. Consumers are encouraged to share their data needs because the market will solve the discovery and integration problem for them in exchange for some form of currency. We consider internal markets that operate within organizations to bring down data silos, as well as external markets that operate across organizations to increase the value of data for everybody. We outline a research agenda that revolves around two problems. The problem of market design, or how to design rules that lead to the outcomes we want, and the systems problem, how to implement the market and enforce the rules. Treating data as a first-class asset is sorely needed to extend the value of data to more organizations, and we propose data market platforms as one mechanism to achieve this goal.

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arXiv2020

Fast and Reliable Missing Data Contingency Analysis with Predicate-Constraints

Today, data analysts largely rely on intuition to determine whether missing or withheld rows of a dataset significantly affect their analyses. We propose a framework that can produce automatic contingency analysis, i.e., the range of values an aggregate SQL query could take, under formal constraints describing the variation and frequency of missing data tuples. We describe how to process SUM, COUNT, AVG, MIN, and MAX queries in these conditions resulting in hard error bounds with testable constraints. We propose an optimization algorithm based on an integer program that reconciles a set of such constraints, even if they are overlapping, conflicting, or unsatisfiable, into such bounds. Our experiments on real-world datasets against several statistical imputation and inference baselines show that statistical techniques can have a deceptively high error rate that is often unpredictable. In contrast, our framework offers hard bounds that are guaranteed to hold if the constraints are not violated. In spite of these hard bounds, we show competitive accuracy to statistical baselines.

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arXiv2018

DLHub: Model and Data Serving for Science

While the Machine Learning (ML) landscape is evolving rapidly, there has been a relative lag in the development of the "learning systems" needed to enable broad adoption. Furthermore, few such systems are designed to support the specialized requirements of scientific ML. Here we present the Data and Learning Hub for science (DLHub), a multi-tenant system that provides both model repository and serving capabilities with a focus on science applications. DLHub addresses two significant shortcomings in current systems. First, its selfservice model repository allows users to share, publish, verify, reproduce, and reuse models, and addresses concerns related to model reproducibility by packaging and distributing models and all constituent components. Second, it implements scalable and low-latency serving capabilities that can leverage parallel and distributed computing resources to democratize access to published models through a simple web interface. Unlike other model serving frameworks, DLHub can store and serve any Python 3-compatible model or processing function, plus multiple-function pipelines. We show that relative to other model serving systems including TensorFlow Serving, SageMaker, and Clipper, DLHub provides greater capabilities, comparable performance without memoization and batching, and significantly better performance when the latter two techniques can be employed. We also describe early uses of DLHub for scientific applications.

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arXiv2017

BoostClean: Automated Error Detection and Repair for Machine Learning

Predictive models based on machine learning can be highly sensitive to data error. Training data are often combined with a variety of different sources, each susceptible to different types of inconsistencies, and new data streams during prediction time, the model may encounter previously unseen inconsistencies. An important class of such inconsistencies is domain value violations that occur when an attribute value is outside of an allowed domain. We explore automatically detecting and repairing such violations by leveraging the often available clean test labels to determine whether a given detection and repair combination will improve model accuracy. We present BoostClean which automatically selects an ensemble of error detection and repair combinations using statistical boosting. BoostClean selects this ensemble from an extensible library that is pre-populated general detection functions, including a novel detector based on the Word2Vec deep learning model, which detects errors across a diverse set of domains. Our evaluation on a collection of 12 datasets from Kaggle, the UCI repository, real-world data analyses, and production datasets that show that Boost- Clean can increase absolute prediction accuracy by up to 9% over the best non-ensembled alternatives. Our optimizations including parallelism, materialization, and indexing techniques show a 22.2x end-to-end speedup on a 16-core machine.

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arXiv2017

Clipper: A Low-Latency Online Prediction Serving System

Machine learning is being deployed in a growing number of applications which demand real-time, accurate, and robust predictions under heavy query load. However, most machine learning frameworks and systems only address model training and not deployment. In this paper, we introduce Clipper, a general-purpose low-latency prediction serving system. Interposing between end-user applications and a wide range of machine learning frameworks, Clipper introduces a modular architecture to simplify model deployment across frameworks and applications. Furthermore, by introducing caching, batching, and adaptive model selection techniques, Clipper reduces prediction latency and improves prediction throughput, accuracy, and robustness without modifying the underlying machine learning frameworks. We evaluate Clipper on four common machine learning benchmark datasets and demonstrate its ability to meet the latency, accuracy, and throughput demands of online serving applications. Finally, we compare Clipper to the TensorFlow Serving system and demonstrate that we are able to achieve comparable throughput and latency while enabling model composition and online learning to improve accuracy and render more robust predictions.

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arXiv2016

KeystoneML: Optimizing Pipelines for Large-Scale Advanced Analytics

Modern advanced analytics applications make use of machine learning techniques and contain multiple steps of domain-specific and general-purpose processing with high resource requirements. We present KeystoneML, a system that captures and optimizes the end-to-end large-scale machine learning applications for high-throughput training in a distributed environment with a high-level API. This approach offers increased ease of use and higher performance over existing systems for large scale learning. We demonstrate the effectiveness of KeystoneML in achieving high quality statistical accuracy and scalable training using real world datasets in several domains. By optimizing execution KeystoneML achieves up to 15x training throughput over unoptimized execution on a real image classification application.

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arXiv2016

Scientific Computing Meets Big Data Technology: An Astronomy Use Case

Scientific analyses commonly compose multiple single-process programs into a dataflow. An end-to-end dataflow of single-process programs is known as a many-task application. Typically, tools from the HPC software stack are used to parallelize these analyses. In this work, we investigate an alternate approach that uses Apache Spark -- a modern big data platform -- to parallelize many-task applications. We present Kira, a flexible and distributed astronomy image processing toolkit using Apache Spark. We then use the Kira toolkit to implement a Source Extractor application for astronomy images, called Kira SE. With Kira SE as the use case, we study the programming flexibility, dataflow richness, scheduling capacity and performance of Apache Spark running on the EC2 cloud. By exploiting data locality, Kira SE achieves a 2.5x speedup over an equivalent C program when analyzing a 1TB dataset using 512 cores on the Amazon EC2 cloud. Furthermore, we show that by leveraging software originally designed for big data infrastructure, Kira SE achieves competitive performance to the C implementation running on the NERSC Edison supercomputer. Our experience with Kira indicates that emerging Big Data platforms such as Apache Spark are a performant alternative for many-task scientific applications.

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arXiv2016

Scalable Linear Causal Inference for Irregularly Sampled Time Series with Long Range Dependencies

Linear causal analysis is central to a wide range of important application spanning finance, the physical sciences, and engineering. Much of the existing literature in linear causal analysis operates in the time domain. Unfortunately, the direct application of time domain linear causal analysis to many real-world time series presents three critical challenges: irregular temporal sampling, long range dependencies, and scale. Moreover, real-world data is often collected at irregular time intervals across vast arrays of decentralized sensors and with long range dependencies which make naive time domain correlation estimators spurious. In this paper we present a frequency domain based estimation framework which naturally handles irregularly sampled data and long range dependencies while enabled memory and communication efficient distributed processing of time series data. By operating in the frequency domain we eliminate the need to interpolate and help mitigate the effects of long range dependencies. We implement and evaluate our new work-flow in the distributed setting using Apache Spark and demonstrate on both Monte Carlo simulations and high-frequency financial trading that we can accurately recover causal structure at scale.

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arXiv2016

ActiveClean: Interactive Data Cleaning While Learning Convex Loss Models

Data cleaning is often an important step to ensure that predictive models, such as regression and classification, are not affected by systematic errors such as inconsistent, out-of-date, or outlier data. Identifying dirty data is often a manual and iterative process, and can be challenging on large datasets. However, many data cleaning workflows can introduce subtle biases into the training processes due to violation of independence assumptions. We propose ActiveClean, a progressive cleaning approach where the model is updated incrementally instead of re-training and can guarantee accuracy on partially cleaned data. ActiveClean supports a popular class of models called convex loss models (e.g., linear regression and SVMs). ActiveClean also leverages the structure of a user's model to prioritize cleaning those records likely to affect the results. We evaluate ActiveClean on five real-world datasets UCI Adult, UCI EEG, MNIST, Dollars For Docs, and WorldBank with both real and synthetic errors. Our results suggest that our proposed optimizations can improve model accuracy by up-to 2.5x for the same amount of data cleaned. Furthermore for a fixed cleaning budget and on all real dirty datasets, ActiveClean returns more accurate models than uniform sampling and Active Learning.

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arXiv2015

Asynchronous Complex Analytics in a Distributed Dataflow Architecture

Scalable distributed dataflow systems have recently experienced widespread adoption, with commodity dataflow engines such as Hadoop and Spark, and even commodity SQL engines routinely supporting increasingly sophisticated analytics tasks (e.g., support vector machines, logistic regression, collaborative filtering). However, these systems' synchronous (often Bulk Synchronous Parallel) dataflow execution model is at odds with an increasingly important trend in the machine learning community: the use of asynchrony via shared, mutable state (i.e., data races) in convex programming tasks, which has---in a single-node context---delivered noteworthy empirical performance gains and inspired new research into asynchronous algorithms. In this work, we attempt to bridge this gap by evaluating the use of lightweight, asynchronous state transfer within a commodity dataflow engine. Specifically, we investigate the use of asynchronous sideways information passing (ASIP) that presents single-stage parallel iterators with a Volcano-like intra-operator iterator that can be used for asynchronous information passing. We port two synchronous convex programming algorithms, stochastic gradient descent and the alternating direction method of multipliers (ADMM), to use ASIPs. We evaluate an implementation of ASIPs within on Apache Spark that exhibits considerable speedups as well as a rich set of performance trade-offs in the use of these asynchronous algorithms.

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arXiv2015

Stale View Cleaning: Getting Fresh Answers from Stale Materialized Views

Materialized views (MVs), stored pre-computed results, are widely used to facilitate fast queries on large datasets. When new records arrive at a high rate, it is infeasible to continuously update (maintain) MVs and a common solution is to defer maintenance by batching updates together. Between batches the MVs become increasingly stale with incorrect, missing, and superfluous rows leading to increasingly inaccurate query results. We propose Stale View Cleaning (SVC) which addresses this problem from a data cleaning perspective. In SVC, we efficiently clean a sample of rows from a stale MV, and use the clean sample to estimate aggregate query results. While approximate, the estimated query results reflect the most recent data. As sampling can be sensitive to long-tailed distributions, we further explore an outlier indexing technique to give increased accuracy when the data distributions are skewed. SVC complements existing deferred maintenance approaches by giving accurate and bounded query answers between maintenance. We evaluate our method on a generated dataset from the TPC-D benchmark and a real video distribution application. Experiments confirm our theoretical results: (1) cleaning an MV sample is more efficient than full view maintenance, (2) the estimated results are more accurate than using the stale MV, and (3) SVC is applicable for a wide variety of MVs.

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arXiv2015

CLAMShell: Speeding up Crowds for Low-latency Data Labeling

Data labeling is a necessary but often slow process that impedes the development of interactive systems for modern data analysis. Despite rising demand for manual data labeling, there is a surprising lack of work addressing its high and unpredictable latency. In this paper, we introduce CLAMShell, a system that speeds up crowds in order to achieve consistently low-latency data labeling. We offer a taxonomy of the sources of labeling latency and study several large crowd-sourced labeling deployments to understand their empirical latency profiles. Driven by these insights, we comprehensively tackle each source of latency, both by developing novel techniques such as straggler mitigation and pool maintenance and by optimizing existing methods such as crowd retainer pools and active learning. We evaluate CLAMShell in simulation and on live workers on Amazon's Mechanical Turk, demonstrating that our techniques can provide an order of magnitude speedup and variance reduction over existing crowdsourced labeling strategies.

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arXiv2015

MLlib: Machine Learning in Apache Spark

Apache Spark is a popular open-source platform for large-scale data processing that is well-suited for iterative machine learning tasks. In this paper we present MLlib, Spark's open-source distributed machine learning library. MLlib provides efficient functionality for a wide range of learning settings and includes several underlying statistical, optimization, and linear algebra primitives. Shipped with Spark, MLlib supports several languages and provides a high-level API that leverages Spark's rich ecosystem to simplify the development of end-to-end machine learning pipelines. MLlib has experienced a rapid growth due to its vibrant open-source community of over 140 contributors, and includes extensive documentation to support further growth and to let users quickly get up to speed.

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arXiv2015

TuPAQ: An Efficient Planner for Large-scale Predictive Analytic Queries

The proliferation of massive datasets combined with the development of sophisticated analytical techniques have enabled a wide variety of novel applications such as improved product recommendations, automatic image tagging, and improved speech-driven interfaces. These and many other applications can be supported by Predictive Analytic Queries (PAQs). A major obstacle to supporting PAQs is the challenging and expensive process of identifying and training an appropriate predictive model. Recent efforts aiming to automate this process have focused on single node implementations and have assumed that model training itself is a black box, thus limiting the effectiveness of such approaches on large-scale problems. In this work, we build upon these recent efforts and propose an integrated PAQ planning architecture that combines advanced model search techniques, bandit resource allocation via runtime algorithm introspection, and physical optimization via batching. The result is TuPAQ, a component of the MLbase system, which solves the PAQ planning problem with comparable quality to exhaustive strategies but an order of magnitude more efficiently than the standard baseline approach, and can scale to models trained on terabytes of data across hundreds of machines.

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arXiv2014

Active Learning for Crowd-Sourced Databases

Crowd-sourcing has become a popular means of acquiring labeled data for a wide variety of tasks where humans are more accurate than computers, e.g., labeling images, matching objects, or analyzing sentiment. However, relying solely on the crowd is often impractical even for data sets with thousands of items, due to time and cost constraints of acquiring human input (which cost pennies and minutes per label). In this paper, we propose algorithms for integrating machine learning into crowd-sourced databases, with the goal of allowing crowd-sourcing applications to scale, i.e., to handle larger datasets at lower costs. The key observation is that, in many of the above tasks, humans and machine learning algorithms can be complementary, as humans are often more accurate but slow and expensive, while algorithms are usually less accurate, but faster and cheaper. Based on this observation, we present two new active learning algorithms to combine humans and algorithms together in a crowd-sourced database. Our algorithms are based on the theory of non-parametric bootstrap, which makes our results applicable to a broad class of machine learning models. Our results, on three real-life datasets collected with Amazon's Mechanical Turk, and on 15 well-known UCI data sets, show that our methods on average ask humans to label one to two orders of magnitude fewer items to achieve the same accuracy as a baseline that labels random images, and two to eight times fewer questions than previous active learning schemes.

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arXiv2014

The Missing Piece in Complex Analytics: Low Latency, Scalable Model Management and Serving with Velox

To support complex data-intensive applications such as personalized recommendations, targeted advertising, and intelligent services, the data management community has focused heavily on the design of systems to support training complex models on large datasets. Unfortunately, the design of these systems largely ignores a critical component of the overall analytics process: the deployment and serving of models at scale. In this work, we present Velox, a new component of the Berkeley Data Analytics Stack. Velox is a data management system for facilitating the next steps in real-world, large-scale analytics pipelines: online model management, maintenance, and serving. Velox provides end-user applications and services with a low-latency, intuitive interface to models, transforming the raw statistical models currently trained using existing offline large-scale compute frameworks into full-blown, end-to-end data products capable of recommending products, targeting advertisements, and personalizing web content. To provide up-to-date results for these complex models, Velox also facilitates lightweight online model maintenance and selection (i.e., dynamic weighting). In this paper, we describe the challenges and architectural considerations required to achieve this functionality, including the abilities to span online and offline systems, to adaptively adjust model materialization strategies, and to exploit inherent statistical properties such as model error tolerance, all while operating at "Big Data" scale.

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