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Ninghao Liu

Publications and source records attributed to Ninghao Liu.

At least 55 records · Page 3Linked to original sources

Self-Regularization with Sparse Autoencoders for Controllable LLM-based Classification

Modern text classification methods heavily rely on contextual embeddings from large language models (LLMs). Compared to human-engineered features, these embeddings provide automatic and effective representations for classification model training. However, they also introduce a challenge: we lose the ability to manually remove unintended features, such as sensitive or task-irrelevant features, to guarantee regulatory compliance or improve the generalizability of classification models. This limitation arises because LLM embeddings are opaque and difficult to interpret. In this paper, we propose a novel framework to identify and regularize unintended features in the LLM latent space. Specifically, we first pre-train a sparse autoencoder (SAE) to extract interpretable features from LLM latent spaces. To ensure the SAE can capture task-specific features, we further fine-tune it on task-specific datasets. In training the classification model, we propose a simple and effective regularizer, by minimizing the similarity between the classifier weights and the identified unintended feature, to remove the impact of these unintended features on classification. We evaluate the proposed framework on three real-world tasks, including toxic chat detection, reward modeling, and disease diagnosis. Results show that the proposed self-regularization framework can improve the classifier's generalizability by regularizing those features that are not semantically correlated to the task. This work pioneers controllable text classification on LLM latent spaces by leveraging interpreted features to address generalizability, fairness, and privacy challenges. The code and data are publicly available at https://github.com/JacksonWuxs/Controllable_LLM_Classifier.

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Automating Expert-Level Medical Reasoning Evaluation of Large Language Models

As large language models (LLMs) become increasingly integrated into clinical decision-making, ensuring transparent and trustworthy reasoning is essential. However, existing evaluation strategies of LLMs' medical reasoning capability either suffer from unsatisfactory assessment or poor scalability, and a rigorous benchmark remains lacking. To address this, we introduce MedThink-Bench, a benchmark designed for rigorous, explainable, and scalable assessment of LLMs' medical reasoning. MedThink-Bench comprises 500 challenging questions across ten medical domains, each annotated with expert-crafted step-by-step rationales. Building on this, we propose LLM-w-Ref, a novel evaluation framework that leverages fine-grained rationales and LLM-as-a-Judge mechanisms to assess intermediate reasoning with expert-level fidelity while maintaining scalability. Experiments show that LLM-w-Ref exhibits a strong positive correlation with expert judgments. Benchmarking twelve state-of-the-art LLMs, we find that smaller models (e.g., MedGemma-27B) can surpass larger proprietary counterparts (e.g., OpenAI-o3). Overall, MedThink-Bench offers a foundational tool for evaluating LLMs' medical reasoning, advancing their safe and responsible deployment in clinical practice.

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MobileGUI-RL: Advancing Mobile GUI Agent through Reinforcement Learning in Online Environment

Recently, there has been a surge of vision-based GUI agents designed to automate everyday mobile and web tasks. These agents interpret raw GUI screenshots and autonomously decide where to click, scroll, or type, which bypasses handcrafted rules and app-specific APIs. However, most existing methods trained GUI agent in the offline environment using pre-collected trajectories. This approach limits scalability, causes overfitting to specific UI templates, and leads to brittle policies when faced with unseen environment. We present MobileGUI-RL, a scalable framework that trains GUI agent in online environment. MobileGUI-RL contains two key components. It (i) synthesizes a curriculum of learnable tasks through self-exploration and filtering, and (ii) adapts GRPO to GUI navigation with trajectory-aware advantages and composite rewards that balance task success and execution efficiency. Experiments on three online mobile-agent benchmarks show consistent gains, validating the effectiveness of our approach.

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RadFabric: Agentic AI System with Reasoning Capability for Radiology

Chest X ray (CXR) imaging remains a critical diagnostic tool for thoracic conditions, but current automated systems face limitations in pathology coverage, diagnostic accuracy, and integration of visual and textual reasoning. To address these gaps, we propose RadFabric, a multi agent, multimodal reasoning framework that unifies visual and textual analysis for comprehensive CXR interpretation. RadFabric is built on the Model Context Protocol (MCP), enabling modularity, interoperability, and scalability for seamless integration of new diagnostic agents. The system employs specialized CXR agents for pathology detection, an Anatomical Interpretation Agent to map visual findings to precise anatomical structures, and a Reasoning Agent powered by large multimodal reasoning models to synthesize visual, anatomical, and clinical data into transparent and evidence based diagnoses. RadFabric achieves significant performance improvements, with near-perfect detection of challenging pathologies like fractures (1.000 accuracy) and superior overall diagnostic accuracy (0.799) compared to traditional systems (0.229 to 0.527). By integrating cross modal feature alignment and preference-driven reasoning, RadFabric advances AI-driven radiology toward transparent, anatomically precise, and clinically actionable CXR analysis.

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Concept-Centric Token Interpretation for Vector-Quantized Generative Models

Vector-Quantized Generative Models (VQGMs) have emerged as powerful tools for image generation. However, the key component of VQGMs -- the codebook of discrete tokens -- is still not well understood, e.g., which tokens are critical to generate an image of a certain concept? This paper introduces Concept-Oriented Token Explanation (CORTEX), a novel approach for interpreting VQGMs by identifying concept-specific token combinations. Our framework employs two methods: (1) a sample-level explanation method that analyzes token importance scores in individual images, and (2) a codebook-level explanation method that explores the entire codebook to find globally relevant tokens. Experimental results demonstrate CORTEX's efficacy in providing clear explanations of token usage in the generative process, outperforming baselines across multiple pretrained VQGMs. Besides enhancing VQGMs transparency, CORTEX is useful in applications such as targeted image editing and shortcut feature detection. Our code is available at https://github.com/YangTianze009/CORTEX.

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Artificial Intelligence Bias on English Language Learners in Automatic Scoring

This study investigated potential scoring biases and disparities toward English Language Learners (ELLs) when using automatic scoring systems for middle school students' written responses to science assessments. We specifically focus on examining how unbalanced training data with ELLs contributes to scoring bias and disparities. We fine-tuned BERT with four datasets: responses from (1) ELLs, (2) non-ELLs, (3) a mixed dataset reflecting the real-world proportion of ELLs and non-ELLs (unbalanced), and (4) a balanced mixed dataset with equal representation of both groups. The study analyzed 21 assessment items: 10 items with about 30,000 ELL responses, five items with about 1,000 ELL responses, and six items with about 200 ELL responses. Scoring accuracy (Acc) was calculated and compared to identify bias using Friedman tests. We measured the Mean Score Gaps (MSGs) between ELLs and non-ELLs and then calculated the differences in MSGs generated through both the human and AI models to identify the scoring disparities. We found that no AI bias and distorted disparities between ELLs and non-ELLs were found when the training dataset was large enough (ELL = 30,000 and ELL = 1,000), but concerns could exist if the sample size is limited (ELL = 200).

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Usable XAI: 10 Strategies Towards Exploiting Explainability in the LLM Era

Explainable AI (XAI) refers to techniques that provide human-understandable insights into the workings of AI models. Recently, the focus of XAI is being extended toward explaining Large Language Models (LLMs). This extension calls for a significant transformation in the XAI methodologies for two reasons. First, many existing XAI methods cannot be directly applied to LLMs due to their complexity and advanced capabilities. Second, as LLMs are increasingly deployed in diverse applications, the role of XAI shifts from merely opening the ``black box'' to actively enhancing the productivity and applicability of LLMs in real-world settings. Meanwhile, the conversation and generation abilities of LLMs can reciprocally enhance XAI. Therefore, in this paper, we introduce Usable XAI in the context of LLMs by analyzing (1) how XAI can explain and improve LLM-based AI systems and (2) how XAI techniques can be improved by using LLMs. We introduce 10 strategies, introducing the key techniques for each and discussing their associated challenges. We also provide case studies to demonstrate how to obtain and leverage explanations. The code used in this paper can be found at: https://github.com/JacksonWuxs/UsableXAI_LLM.

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Enhancing Cognition and Explainability of Multimodal Foundation Models with Self-Synthesized Data

Large Multimodal Models (LMMs), or Vision-Language Models (VLMs), have shown impressive capabilities in a wide range of visual tasks. However, they often struggle with fine-grained visual reasoning, failing to identify domain-specific objectives and provide justifiable explanations for their predictions. To address the above challenge, we propose a novel visual rejection sampling framework to improve the cognition and explainability of LMMs using self-synthesized data. Specifically, visual fine-tuning requires images, queries, and target answers. Our approach begins by synthesizing interpretable answers that include human-verifiable visual features. These features are based on expert-defined concepts, and carefully selected based on their alignment with the image content. After each round of fine-tuning, we apply a reward model-free filtering mechanism to select the highest-quality interpretable answers for the next round of tuning. This iterative process of synthetic data generation and fine-tuning progressively improves the model's ability to generate accurate and reasonable explanations. Experimental results demonstrate the effectiveness of our method in improving both the accuracy and explainability of specialized visual classification tasks.

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Unveiling Scoring Processes: Dissecting the Differences between LLMs and Human Graders in Automatic Scoring

Large language models (LLMs) have demonstrated strong potential in performing automatic scoring for constructed response assessments. While constructed responses graded by humans are usually based on given grading rubrics, the methods by which LLMs assign scores remain largely unclear. It is also uncertain how closely AI's scoring process mirrors that of humans or if it adheres to the same grading criteria. To address this gap, this paper uncovers the grading rubrics that LLMs used to score students' written responses to science tasks and their alignment with human scores. We also examine whether enhancing the alignments can improve scoring accuracy. Specifically, we prompt LLMs to generate analytic rubrics that they use to assign scores and study the alignment gap with human grading rubrics. Based on a series of experiments with various configurations of LLM settings, we reveal a notable alignment gap between human and LLM graders. While LLMs can adapt quickly to scoring tasks, they often resort to shortcuts, bypassing deeper logical reasoning expected in human grading. We found that incorporating high-quality analytical rubrics designed to reflect human grading logic can mitigate this gap and enhance LLMs' scoring accuracy. These results underscore the need for a nuanced approach when applying LLMs in science education and highlight the importance of aligning LLM outputs with human expectations to ensure efficient and accurate automatic scoring.

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Interpreting and Steering LLMs with Mutual Information-based Explanations on Sparse Autoencoders

Large language models (LLMs) excel at handling human queries, but they can occasionally generate flawed or unexpected responses. Understanding their internal states is crucial for understanding their successes, diagnosing their failures, and refining their capabilities. Although sparse autoencoders (SAEs) have shown promise for interpreting LLM internal representations, limited research has explored how to better explain SAE features, i.e., understanding the semantic meaning of features learned by SAE. Our theoretical analysis reveals that existing explanation methods suffer from the frequency bias issue, where they emphasize linguistic patterns over semantic concepts, while the latter is more critical to steer LLM behaviors. To address this, we propose using a fixed vocabulary set for feature interpretations and designing a mutual information-based objective, aiming to better capture the semantic meaning behind these features. We further propose two runtime steering strategies that adjust the learned feature activations based on their corresponding explanations. Empirical results show that, compared to baselines, our method provides more discourse-level explanations and effectively steers LLM behaviors to defend against jailbreak attacks. These findings highlight the value of explanations for steering LLM behaviors in downstream applications. We will release our code and data once accepted.

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SearchRAG: Can Search Engines Be Helpful for LLM-based Medical Question Answering?

Large Language Models (LLMs) have shown remarkable capabilities in general domains but often struggle with tasks requiring specialized knowledge. Conventional Retrieval-Augmented Generation (RAG) techniques typically retrieve external information from static knowledge bases, which can be outdated or incomplete, missing fine-grained clinical details essential for accurate medical question answering. In this work, we propose SearchRAG, a novel framework that overcomes these limitations by leveraging real-time search engines. Our method employs synthetic query generation to convert complex medical questions into search-engine-friendly queries and utilizes uncertainty-based knowledge selection to filter and incorporate the most relevant and informative medical knowledge into the LLM's input. Experimental results demonstrate that our method significantly improves response accuracy in medical question answering tasks, particularly for complex questions requiring detailed and up-to-date knowledge.

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EAP-GP: Mitigating Saturation Effect in Gradient-based Automated Circuit Identification

Understanding the internal mechanisms of transformer-based language models remains challenging. Mechanistic interpretability based on circuit discovery aims to reverse engineer neural networks by analyzing their internal processes at the level of computational subgraphs. In this paper, we revisit existing gradient-based circuit identification methods and find that their performance is either affected by the zero-gradient problem or saturation effects, where edge attribution scores become insensitive to input changes, resulting in noisy and unreliable attribution evaluations for circuit components. To address the saturation effect, we propose Edge Attribution Patching with GradPath (EAP-GP), EAP-GP introduces an integration path, starting from the input and adaptively following the direction of the difference between the gradients of corrupted and clean inputs to avoid the saturated region. This approach enhances attribution reliability and improves the faithfulness of circuit identification. We evaluate EAP-GP on 6 datasets using GPT-2 Small, GPT-2 Medium, and GPT-2 XL. Experimental results demonstrate that EAP-GP outperforms existing methods in circuit faithfulness, achieving improvements up to 17.7%. Comparisons with manually annotated ground-truth circuits demonstrate that EAP-GP achieves precision and recall comparable to or better than previous approaches, highlighting its effectiveness in identifying accurate circuits.

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LMOD: A Large Multimodal Ophthalmology Dataset and Benchmark for Large Vision-Language Models

The prevalence of vision-threatening eye diseases is a significant global burden, with many cases remaining undiagnosed or diagnosed too late for effective treatment. Large vision-language models (LVLMs) have the potential to assist in understanding anatomical information, diagnosing eye diseases, and drafting interpretations and follow-up plans, thereby reducing the burden on clinicians and improving access to eye care. However, limited benchmarks are available to assess LVLMs' performance in ophthalmology-specific applications. In this study, we introduce LMOD, a large-scale multimodal ophthalmology benchmark consisting of 21,993 instances across (1) five ophthalmic imaging modalities: optical coherence tomography, color fundus photographs, scanning laser ophthalmoscopy, lens photographs, and surgical scenes; (2) free-text, demographic, and disease biomarker information; and (3) primary ophthalmology-specific applications such as anatomical information understanding, disease diagnosis, and subgroup analysis. In addition, we benchmarked 13 state-of-the-art LVLM representatives from closed-source, open-source, and medical domains. The results demonstrate a significant performance drop for LVLMs in ophthalmology compared to other domains. Systematic error analysis further identified six major failure modes: misclassification, failure to abstain, inconsistent reasoning, hallucination, assertions without justification, and lack of domain-specific knowledge. In contrast, supervised neural networks specifically trained on these tasks as baselines demonstrated high accuracy. These findings underscore the pressing need for benchmarks in the development and validation of ophthalmology-specific LVLMs.

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UniGLM: Training One Unified Language Model for Text-Attributed Graph Embedding

Representation learning on text-attributed graphs (TAGs), where nodes are represented by textual descriptions, is crucial for textual and relational knowledge systems and recommendation systems. Currently, state-of-the-art embedding methods for TAGs primarily focus on fine-tuning language models (e.g., BERT) using structure-aware training signals. While effective, these methods are tailored for individual TAG and cannot generalize across various graph scenarios. Given the shared textual space, leveraging multiple TAGs for joint fine-tuning, aligning text and graph structure from different aspects, would be more beneficial. Motivated by this, we introduce a novel Unified Graph Language Model (UniGLM) framework, the first graph embedding model that generalizes well to both in-domain and cross-domain TAGs. Specifically, UniGLM is trained over multiple TAGs with different domains and scales using self-supervised contrastive learning. UniGLM includes an adaptive positive sample selection technique for identifying structurally similar nodes and a lazy contrastive module that is devised to accelerate training by minimizing repetitive encoding calculations. Extensive empirical results across 9 benchmark TAGs demonstrate UniGLM's efficacy against leading embedding baselines in terms of generalization (various downstream tasks and backbones) and transfer learning (in and out of domain scenarios). The code is available at https://github.com/NYUSHCS/UniGLM.

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MGH Radiology Llama: A Llama 3 70B Model for Radiology

In recent years, the field of radiology has increasingly harnessed the power of artificial intelligence (AI) to enhance diagnostic accuracy, streamline workflows, and improve patient care. Large language models (LLMs) have emerged as particularly promising tools, offering significant potential in assisting radiologists with report generation, clinical decision support, and patient communication. This paper presents an advanced radiology-focused large language model: MGH Radiology Llama. It is developed using the Llama 3 70B model, building upon previous domain-specific models like Radiology-GPT and Radiology-Llama2. Leveraging a unique and comprehensive dataset from Massachusetts General Hospital, comprising over 6.5 million de-identified medical reports across various imaging modalities, the model demonstrates significant improvements in generating accurate and clinically relevant radiology impressions given the corresponding findings. Our evaluation, incorporating both traditional metrics and a GPT-4-based assessment, highlights the enhanced performance of this work over general-purpose LLMs.

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Language Ranker: A Metric for Quantifying LLM Performance Across High and Low-Resource Languages

The development of Large Language Models (LLMs) relies on extensive text corpora, which are often unevenly distributed across languages. This imbalance results in LLMs performing significantly better on high-resource languages like English, German, and French, while their capabilities in low-resource languages remain inadequate. Currently, there is a lack of quantitative methods to evaluate the performance of LLMs in these low-resource languages. To address this gap, we propose the Language Ranker, an intrinsic metric designed to benchmark and rank languages based on LLM performance using internal representations. By comparing the LLM's internal representation of various languages against a baseline derived from English, we can assess the model's multilingual capabilities in a robust and language-agnostic manner. Our analysis reveals that high-resource languages exhibit higher similarity scores with English, demonstrating superior performance, while low-resource languages show lower similarity scores, underscoring the effectiveness of our metric in assessing language-specific capabilities. Besides, the experiments show that there is a strong correlation between the LLM's performance in different languages and the proportion of those languages in its pre-training corpus. These insights underscore the efficacy of the Language Ranker as a tool for evaluating LLM performance across different languages, particularly those with limited resources.

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Foundation Models for Low-Resource Language Education (Vision Paper)

Recent studies show that large language models (LLMs) are powerful tools for working with natural language, bringing advances in many areas of computational linguistics. However, these models face challenges when applied to low-resource languages due to limited training data and difficulty in understanding cultural nuances. Research is now focusing on multilingual models to improve LLM performance for these languages. Education in these languages also struggles with a lack of resources and qualified teachers, particularly in underdeveloped regions. Here, LLMs can be transformative, supporting innovative methods like community-driven learning and digital platforms. This paper discusses how LLMs could enhance education for low-resource languages, emphasizing practical applications and benefits.

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Transcending Language Boundaries: Harnessing LLMs for Low-Resource Language Translation

Large Language Models (LLMs) have demonstrated remarkable success across a wide range of tasks and domains. However, their performance in low-resource language translation, particularly when translating into these languages, remains underexplored. This gap poses significant challenges, as linguistic barriers hinder the cultural preservation and development of minority communities. To address this issue, this paper introduces a novel retrieval-based method that enhances translation quality for low-resource languages by focusing on key terms, which involves translating keywords and retrieving corresponding examples from existing data. To evaluate the effectiveness of this method, we conducted experiments translating from English into three low-resource languages: Cherokee, a critically endangered indigenous language of North America; Tibetan, a historically and culturally significant language in Asia; and Manchu, a language with few remaining speakers. Our comparison with the zero-shot performance of GPT-4o and LLaMA 3.1 405B, highlights the significant challenges these models face when translating into low-resource languages. In contrast, our retrieval-based method shows promise in improving both word-level accuracy and overall semantic understanding by leveraging existing resources more effectively.

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