arXiv subjects
Publications and source records attributed to Peter Teuben.
Astrophysics papers often rely on software which may or may not be available, and URLs are often used as proxy citations for software and data. We extracted all URLs from two journals' 2015 research articles, removed those from certain long-term reliable domains, and tested the remainder to determine what percentage of these URLs were accessible in October 2018.
We present a new package for joint deconvolution of ALMA 12m, 7m, and Total Power (TP) data, dubbed ``Total Power Map to Visibilities (TP2VIS)". It converts a TP (single-dish) map into visibilities on the CASA platform, which can be input into deconvolvers (e.g., CLEAN) along with 12m and 7m visibilities. A manual is presented in the Github repository (https://github.com/tp2vis/distribute). Combining data from the different ALMA arrays is a driver for a number of science topics, namely those that probe size scales of extended and compact structures simultaneously. We test TP2VIS using model images, one with a single Gaussian and another that mimics the internal structures of giant molecular clouds. The result shows that the better uv coverage with TP2VIS visibilities helps the deconvolution process and reproduces the model image within errors of only 5% over two orders of magnitude in flux.
We present a comparative study of molecular and ionized gas kinematics in nearby galaxies. These results are based on observations from the EDGE survey, which measured spatially resolved $^{12}$CO(J=1-0) in 126 nearby galaxies. Every galaxy in EDGE has corresponding resolved ionized gas measurements from CALIFA. Using a sub-sample of 17 rotation dominated, star-forming galaxies where precise molecular gas rotation curves could be extracted, we derive CO and H$α$ rotation curves using the same geometric parameters out to $\gtrsim$1 $R_e$. We find that $\sim$75% of our sample galaxies have smaller ionized gas rotation velocities than the molecular gas in the outer part of the rotation curve. In no case is the molecular gas rotation velocity measurably lower than that of the ionized gas. We suggest that the lower ionized gas rotation velocity can be attributed to a significant contribution from extraplanar diffuse ionized gas in a thick, turbulence supported disk. Using observations of the H$γ$ transition also available from CALIFA, we measure ionized gas velocity dispersions and find that these galaxies have sufficiently large velocity dispersions to support a thick ionized gas disk. Kinematic simulations show that a thick disk with a vertical rotation velocity gradient can reproduce the observed differences between the CO and H$α$ rotation velocities. Observed line ratios tracing diffuse ionized gas are elevated compared to typical values in the midplane of the Milky Way. In galaxies affected by this phenomenon, dynamical masses measured using ionized gas rotation curves will be systematically underestimated.
We are members of the Astrophysics Source Code Library's Advisory Committee and its editor-in-chief. The Astrophysics Source Code Library (ASCL, ascl.net) is a successful initiative that advocates for open research software and provides an infrastructure for registering, discovering, sharing, and citing this software. Started in 1999, the ASCL has been expanding in recent years, with an average of over 200 codes added each year, and now houses over 1,600 code entries.
We present H13CO+ (J=1-0) and HNC (J=1-0) maps of regions in Serpens South, Serpens Main and NGC 1333 containing filaments. We also observe the Serpens regions using H13CN (J=1-0). These dense gas tracer molecular line observations carried out with CARMA have an angular resolution of ~7", a spectral resolution of ~0.16 km/s and a sensitivity of 50-100 mJy/beam. Although the large scale structure compares well with the Herschel dust continuum maps, we resolve finer structure within the filaments identified by Herschel. The H13CO+ emission distribution agrees with the existing CARMA N2H+ (J=1-0) maps; so they trace the same morphology and kinematics of the filaments. The H13CO+ maps additionally reveal that many regions have multiple structures partially overlapping in the line-of-sight. In two regions, the velocity differences are as high as 1.4 m/s. We identify 8 filamentary structures having typical widths of 0.03-0.08 pc in these tracers. At least 50% of the filamentary structures have distinct velocity gradients perpendicular to their major axis with average values in the range 4-10 km/s/pc. These findings are in support of the theoretical models of filament formation by 2-D inflow in the shock layer created by colliding turbulent cells. We also find evidence of velocity gradients along the length of two filamentary structures; the gradients suggest that these filaments are inflowing towards the cloud core.
The Astrophysics Source Code Library (ASCL, ascl.net), established in 1999, is a citable online registry of source codes used in research that are available for download; the ASCL's main purpose is to improve the transparency, reproducibility, and falsifiability of research. In 2017, improvements to the resource included real-time data backup for submissions and newly-published entries, improved cross-matching of research papers with software entries in ADS, and expansion of preferred citation information for the software in the ASCL.
Broad efforts are underway to capture metadata about research software and retain it across services; notable in this regard is the CodeMeta project. What metadata are important to have about (research) software? What metadata are useful for searching for codes? What would you like to learn about astronomy software? This BoF sought to gather information on metadata most desired by researchers and users of astro software and others interested in registering, indexing, capturing, and doing research on this software. Information from this BoF could conceivably result in changes to the Astrophysics Source Code Library (ASCL) or other resources for the benefit of the community or provide input into other projects concerned with software metadata.
We present interferometric CO observations made with the Combined Array for Millimeter-wave Astronomy (CARMA) of galaxies from the Extragalactic Database for Galaxy Evolution survey (EDGE). These galaxies are selected from the Calar Alto Legacy Integral Field Area (CALIFA) sample, mapped with optical integral field spectroscopy. EDGE provides good quality CO data (3$σ$ sensitivity $Σ_{\rm mol}$ $\sim$ 11 M$_\odot$ pc$^{-2}$ before inclination correction, resolution $\sim1.4$ kpc) for 126 galaxies, constituting the largest interferometric CO survey of galaxies in the nearby universe. We describe the survey, the data characteristics, the data products, and present initial science results. We find that the exponential scale-lengths of the molecular, stellar, and star-forming disks are approximately equal, and galaxies that are more compact in molecular gas than in stars tend to show signs of interaction. We characterize the molecular to stellar ratio as a function of Hubble type and stellar mass, present preliminary results on the resolved relations between the molecular gas, stars, and star formation rate, and discuss the dependence of the resolved molecular depletion time on stellar surface density, nebular extinction, and gas metallicity. EDGE provides a key dataset to address outstanding topics regarding gas and its role in star formation and galaxy evolution, which will be publicly available on completion of the quality assessment.
The Astrophysics Source Code Library (ASCL) is a free online registry of research codes; it is indexed by ADS and Web of Science and has over 1300 code entries. Its entries are increasingly used to cite software; citations have been doubling each year since 2012 and every major astronomy journal accepts citations to the ASCL. Codes in the resource cover all aspects of astrophysics research and many programming languages are represented. In the past year, the ASCL added dashboards for users and administrators, started minting Digital Objective Identifiers (DOIs) for software it houses, and added metadata fields requested by users. This presentation covers the ASCL's growth in the past year and the opportunities afforded it as one of the few domain libraries for science research codes.
Improving software citation and credit continues to be a topic of interest across and within many disciplines, with numerous efforts underway. In this Birds of a Feather (BoF) session, we started with a list of actionable ideas from last year's BoF and other similar efforts and worked alone or in small groups to begin implementing them. Work was captured in a common Google document; the session organizers will disseminate or otherwise put this information to use in or for the community in collaboration with those who contributed.
We present a 3 mm spectral line and continuum survey of L1451 in the Perseus Molecular Cloud. These observations are from the CARMA Large Area Star Formation Survey (CLASSy), which also imaged Barnard 1, NGC 1333, Serpens Main and Serpens South. L1451 is the survey region with the lowest level of star formation activity---it contains no confirmed protostars. HCO+, HCN, and N2H+ (J=1-0) are all detected throughout the region, with HCO+ the most spatially widespread, and molecular emission seen toward 90% of the area above N(H_2) column densities of 1.9x10^21 cm^-2. HCO+ has the broadest velocity dispersion, near 0.3 km/s on average, compared to ~0.15 km/s for the other molecules, thus representing a range from supersonic to subsonic gas motions. Our non-binary dendrogram analysis reveals that the dense gas traced by each molecule has similar hierarchical structure, and that gas surrounding the candidate first hydrostatic core (FHSC), L1451-mm, and other previously detected single-dish continuum clumps have similar hierarchical structure; this suggests that different sub-regions of L1451 are fragmenting on the pathway to forming young stars. We determined the three-dimensional morphology of the largest detectable dense gas structures to be relatively ellipsoidal compared to other CLASSy regions, which appeared more flattened at largest scales. A virial analysis shows the most centrally condensed dust structures are likely unstable against collapse. Additionally, we identify a new spherical, centrally condensed N2H+ feature that could be a new FHSC candidate. The overall results suggest L1451 is a young region starting to form its generation of stars within turbulent, hierarchical structures.
The past year has seen movement on several fronts for improving software citation, including the Center for Open Science's Transparency and Openness Promotion (TOP) Guidelines, the Software Publishing Special Interest Group that was started at January's AAS meeting in Seattle at the request of that organization's Working Group on Astronomical Software, a Sloan-sponsored meeting at GitHub in San Francisco to begin work on a cohesive research software citation-enabling platform, the work of Force11 to "transform and improve" research communication, and WSSSPE's ongoing efforts that include software publication, citation, credit, and sustainability. Brief reports on these efforts were shared at the BoF, after which participants discussed ideas for improving software citation, generating a list of recommendations to the community of software authors, journal publishers, ADS, and research authors. The discussion, recommendations, and feedback will help form recommendations for software citation to those publishers represented in the Software Publishing Special Interest Group and the broader community.
We describe a framework that allows a scientist-user to easily query for information across all Virtual Observatory (VO) repositories and pull it back for analysis. This framework hides the gory details of meta-data remediation and data formatting from the user, allowing them to get on with search, retrieval and analysis of VO data as if they were drawn from a single source using a science based terminology rather than a data-centric one.
We present observations of N2H+(1-0), HCO+(1-0), and HCN(1-0) toward the Serpens Main molecular cloud from the CARMA Large Area Star Formation Survey (CLASSy). We mapped 150 square arcminutes of Serpens Main with an angular resolution of 7 arcsecs. The gas emission is concentrated in two subclusters (the NW and SE subclusters). The SE subcluster has more prominent filamentary structures and more complicated kinematics compared to the NW subcluster. The majority of gas in the two subclusters has subsonic to sonic velocity dispersions. We applied a dendrogram technique with N2H+(1-0) to study the gas structures; the SE subcluster has a higher degree of hierarchy than the NW subcluster. Combining the dendrogram and line fitting analyses reveals two distinct relations: a flat relation between nonthermal velocity dispersion and size, and a positive correlation between variation in velocity centroids and size. The two relations imply a characteristic depth of 0.15 pc for the cloud. Furthermore, we have identified six filaments in the SE subcluster. These filaments have lengths of 0.2 pc and widths of 0.03 pc, which is smaller than a characteristic width of 0.1 pc suggested by Herschel observations. The filaments can be classified into two types based on their properties. The first type, located in the northeast of the SE subcluster, has larger velocity gradients, smaller masses, and nearly critical mass-per-unit-length ratios. The other type, located in the southwest of the SE subcluster, has the opposite properties. Several YSOs are formed along two filaments which have supercritical mass per unit length ratios, while filaments with nearly critical mass-per-unit-length ratios are not associated with YSOs, suggesting that stars are formed on gravitationally unstable filaments.
How do we as a community encourage the reuse of software for telescope operations, data processing, and calibration? How can we support making codes used in research available for others to examine? Continuing the discussion from last year Bring out your codes! BoF session, participants separated into groups to brainstorm ideas to mitigate factors which inhibit code sharing and nurture those which encourage code sharing. The BoF concluded with the sharing of ideas that arose from the brainstorming sessions and a brief summary by the moderator.
The Astrophysics Source Code Library (ASCL, http://ascl.net/) is an online registry of over 700 source codes that are of interest to astrophysicists, with more being added regularly. The ASCL actively seeks out codes as well as accepting submissions from the code authors, and all entries are citable and indexed by ADS. All codes have been used to generate results published in or submitted to a refereed journal and are available either via a download site or froman identified source. In addition to being the largest directory of scientist-written astrophysics programs available, the ASCL is also an active participant in the reproducible research movement with presentations at various conferences, numerous blog posts and a journal article. This poster provides a description of the ASCL and the changes that we are starting to see in the astrophysics community as a result of the work we are doing.
The Astrophysics Source Code Library, started in 1999, has in the past three years grown from a repository for 40 codes to a registry of over 700 codes that are now indexed by ADS. What comes next? We examine the future of the ASCL, the challenges facing it, the rationale behind its practices, and the need to balance what we might do with what we have the resources to accomplish.
We examine the formation of clusters of galaxies in numerical simulations of a QUMOND cosmogony with massive sterile neutrinos. Clusters formed in these exploratory simulations develop higher velocities than those found in ΛCDM simulations. The bulk motions of clusters attain about 1000 km/s by low redshift, comparable to observations whereas ΛCDM simulated clusters tend to fall short. Similarly, high pairwise velocities are common in cluster-cluster collisions like the Bullet cluster. There is also a propensity for the most massive clusters to be larger in QUMOND and to appear earlier than in ΛCDM, potentially providing an explanation for 'pink elephants' like El Gordo. However, it is not obvious that the cluster mass function can be recovered.