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Quan Liu

Publications and source records attributed to Quan Liu.

At least 109 records · Page 6Linked to original sources

Meta-optic Accelerators for Object Classifiers

Rapid advances in deep learning have led to paradigm shifts in a number of fields, from medical image analysis to autonomous systems. These advances, however, have resulted in digital neural networks with large computational requirements, resulting in high energy consumption and limitations in real-time decision making when computation resources are limited. Here, we demonstrate a meta-optic based neural network accelerator that can off-load computationally expensive convolution operations into high-speed and low-power optics. In this architecture, metasurfaces enable both spatial multiplexing and additional information channels, such as polarization, in object classification. End-to-end design is used to co-optimize the optical and digital systems resulting in a robust classifier that achieves 95% accurate classification of handwriting digits and 94% accuracy in classifying both the digit and its polarization state. This approach could enable compact, high-speed, and low-power image and information processing systems for a wide range of applications in machine-vision and artificial intelligence.

physics.optics↗

Heterogeneous Graph Neural Networks for Large-Scale Bid Keyword Matching

Digital advertising is a critical part of many e-commerce platforms such as Taobao and Amazon. While in recent years a lot of attention has been drawn to the consumer side including canonical problems like ctr/cvr prediction, the advertiser side, which directly serves advertisers by providing them with marketing tools, is now playing a more and more important role. When speaking of sponsored search, bid keyword recommendation is the fundamental service. This paper addresses the problem of keyword matching, the primary step of keyword recommendation. Existing methods for keyword matching merely consider modeling relevance based on a single type of relation among ads and keywords, such as query clicks or text similarity, which neglects rich heterogeneous interactions hidden behind them. To fill this gap, the keyword matching problem faces several challenges including: 1) how to learn enriched and robust embeddings from complex interactions among various types of objects; 2) how to conduct high-quality matching for new ads that usually lack sufficient data. To address these challenges, we develop a heterogeneous-graph-neural-network-based model for keyword matching named HetMatch, which has been deployed both online and offline at the core sponsored search platform of Alibaba Group. To extract enriched and robust embeddings among rich relations, we design a hierarchical structure to fuse and enhance the relevant neighborhood patterns both on the micro and the macro level. Moreover, by proposing a multi-view framework, the model is able to involve more positive samples for cold-start ads. Experimental results on a large-scale industrial dataset as well as online AB tests exhibit the effectiveness of HetMatch.

cs.IR↗

DialBERT: A Hierarchical Pre-Trained Model for Conversation Disentanglement

Disentanglement is a problem in which multiple conversations occur in the same channel simultaneously, and the listener should decide which utterance is part of the conversation he will respond to. We propose a new model, named Dialogue BERT (DialBERT), which integrates local and global semantics in a single stream of messages to disentangle the conversations that mixed together. We employ BERT to capture the matching information in each utterance pair at the utterance-level, and use a BiLSTM to aggregate and incorporate the context-level information. With only a 3% increase in parameters, a 12% improvement has been attained in comparison to BERT, based on the F1-Score. The model achieves a state-of-the-art result on the a new dataset proposed by IBM and surpasses previous work by a substantial margin.

cs.CL↗

Program Enhanced Fact Verification with Verbalization and Graph Attention Network

Performing fact verification based on structured data is important for many real-life applications and is a challenging research problem, particularly when it involves both symbolic operations and informal inference based on language understanding. In this paper, we present a Program-enhanced Verbalization and Graph Attention Network (ProgVGAT) to integrate programs and execution into textual inference models. Specifically, a verbalization with program execution model is proposed to accumulate evidences that are embedded in operations over the tables. Built on that, we construct the graph attention verification networks, which are designed to fuse different sources of evidences from verbalized program execution, program structures, and the original statements and tables, to make the final verification decision. To support the above framework, we propose a program selection module optimized with a new training strategy based on margin loss, to produce more accurate programs, which is shown to be effective in enhancing the final verification results. Experimental results show that the proposed framework achieves the new state-of-the-art performance, a 74.4% accuracy, on the benchmark dataset TABFACT.

cs.AI↗

Detecting Speaker Personas from Conversational Texts

Personas are useful for dialogue response prediction. However, the personas used in current studies are pre-defined and hard to obtain before a conversation. To tackle this issue, we study a new task, named Speaker Persona Detection (SPD), which aims to detect speaker personas based on the plain conversational text. In this task, a best-matched persona is searched out from candidates given the conversational text. This is a many-to-many semantic matching task because both contexts and personas in SPD are composed of multiple sentences. The long-term dependency and the dynamic redundancy among these sentences increase the difficulty of this task. We build a dataset for SPD, dubbed as Persona Match on Persona-Chat (PMPC). Furthermore, we evaluate several baseline models and propose utterance-to-profile (U2P) matching networks for this task. The U2P models operate at a fine granularity which treat both contexts and personas as sets of multiple sequences. Then, each sequence pair is scored and an interpretable overall score is obtained for a context-persona pair through aggregation. Evaluation results show that the U2P models outperform their baseline counterparts significantly.

cs.CL↗

Role of quadrupole deformation and continuum effects in the "island of inversion'' nuclei $^{28,29,31}$F

The properties of nuclei in the ``island of inversion'' (IOI) around Z=10 and N=20 are the focus of current nuclear physics research. Recent studies showed that $^{28}$F has a negative-parity ground state (g.s.) and thus lies within the southern shore of the IOI, and $^{29}$F presents a halo structure in its g.s., but it is unclear which effects, such as deformation, shell evolution due to tensor forces, or couplings to the continuum, lead to this situation. We investigate the role of quadrupole deformation and continuum effects on the single-particle (s.p.) structure of $^{28,29,31}$F from a relativistic mean-field (RMF) approach, and show how both phenomena can lead to a negative-parity g.s. in $^{28}$F and halo structures in $^{29,31}$F. We solve the Dirac equation in the complex-momentum (Berggren) representation for a potential with quadrupole deformation at the first order obtained from RMF calculations using the NL3 interaction, and calculate the continuum level densities using the Green's function method. We extract s.p. energies and widths from the continuum level densities to construct Nilsson diagrams, and analyse the evolution of both the widths and occupation probabilities of relevant Nilsson orbitals in $^{28}$F and find that some amount of prolate deformation must be present. In addition, we calculate the density distributions for bound Nilsson orbitals near the Fermi surface in $^{29,31}$F and reveal that for a quadrupole deformation $0.3 \leq β_2 \leq 0.45$ (prolate), halo tails appear at large distances. We also demonstrate that while in the spherical case the $pf$ shells are already inverted and close to the neutron emission threshold, a small amount of quadrupole deformation can reduce the gap between $fp$ shells and increase the role of the continuum, ultimately leading to the negative parity in the g.s. of $^{28}$F and the halo structures in $^{29,31}$F.

nucl-th↗

Compound Figure Separation of Biomedical Images with Side Loss

Unsupervised learning algorithms (e.g., self-supervised learning, auto-encoder, contrastive learning) allow deep learning models to learn effective image representations from large-scale unlabeled data. In medical image analysis, even unannotated data can be difficult to obtain for individual labs. Fortunately, national-level efforts have been made to provide efficient access to obtain biomedical image data from previous scientific publications. For instance, NIH has launched the Open-i search engine that provides a large-scale image database with free access. However, the images in scientific publications consist of a considerable amount of compound figures with subplots. To extract and curate individual subplots, many different compound figure separation approaches have been developed, especially with the recent advances in deep learning. However, previous approaches typically required resource extensive bounding box annotation to train detection models. In this paper, we propose a simple compound figure separation (SimCFS) framework that uses weak classification annotations from individual images. Our technical contribution is three-fold: (1) we introduce a new side loss that is designed for compound figure separation; (2) we introduce an intra-class image augmentation method to simulate hard cases; (3) the proposed framework enables an efficient deployment to new classes of images, without requiring resource extensive bounding box annotations. From the results, the SimCFS achieved a new state-of-the-art performance on the ImageCLEF 2016 Compound Figure Separation Database. The source code of SimCFS is made publicly available at https://github.com/hrlblab/ImageSeperation.

cs.CV↗

VoxelEmbed: 3D Instance Segmentation and Tracking with Voxel Embedding based Deep Learning

Recent advances in bioimaging have provided scientists a superior high spatial-temporal resolution to observe dynamics of living cells as 3D volumetric videos. Unfortunately, the 3D biomedical video analysis is lagging, impeded by resource insensitive human curation using off-the-shelf 3D analytic tools. Herein, biologists often need to discard a considerable amount of rich 3D spatial information by compromising on 2D analysis via maximum intensity projection. Recently, pixel embedding-based cell instance segmentation and tracking provided a neat and generalizable computing paradigm for understanding cellular dynamics. In this work, we propose a novel spatial-temporal voxel-embedding (VoxelEmbed) based learning method to perform simultaneous cell instance segmenting and tracking on 3D volumetric video sequences. Our contribution is in four-fold: (1) The proposed voxel embedding generalizes the pixel embedding with 3D context information; (2) Present a simple multi-stream learning approach that allows effective spatial-temporal embedding; (3) Accomplished an end-to-end framework for one-stage 3D cell instance segmentation and tracking without heavy parameter tuning; (4) The proposed 3D quantification is memory efficient via a single GPU with 12 GB memory. We evaluate our VoxelEmbed method on four 3D datasets (with different cell types) from the ISBI Cell Tracking Challenge. The proposed VoxelEmbed method achieved consistent superior overall performance (OP) on two densely annotated datasets. The performance is also competitive on two sparsely annotated cohorts with 20.6% and 2% of data-set having segmentation annotations. The results demonstrate that the VoxelEmbed method is a generalizable and memory-efficient solution.

cs.CV↗

SemEval-2021 Task 4: Reading Comprehension of Abstract Meaning

This paper introduces the SemEval-2021 shared task 4: Reading Comprehension of Abstract Meaning (ReCAM). This shared task is designed to help evaluate the ability of machines in representing and understanding abstract concepts. Given a passage and the corresponding question, a participating system is expected to choose the correct answer from five candidates of abstract concepts in a cloze-style machine reading comprehension setup. Based on two typical definitions of abstractness, i.e., the imperceptibility and nonspecificity, our task provides three subtasks to evaluate the participating models. Specifically, Subtask 1 aims to evaluate how well a system can model concepts that cannot be directly perceived in the physical world. Subtask 2 focuses on models' ability in comprehending nonspecific concepts located high in a hypernym hierarchy given the context of a passage. Subtask 3 aims to provide some insights into models' generalizability over the two types of abstractness. During the SemEval-2021 official evaluation period, we received 23 submissions to Subtask 1 and 28 to Subtask 2. The participating teams additionally made 29 submissions to Subtask 3. The leaderboard and competition website can be found at https://competitions.codalab.org/competitions/26153. The data and baseline code are available at https://github.com/boyuanzheng010/SemEval2021-Reading-Comprehension-of-Abstract-Meaning.

cs.CL↗

ASIST: Annotation-free Synthetic Instance Segmentation and Tracking by Adversarial Simulations

Background: The quantitative analysis of microscope videos often requires instance segmentation and tracking of cellular and subcellular objects. The traditional method consists of two stages: (1) performing instance object segmentation of each frame, and (2) associating objects frame-by-frame. Recently, pixel-embedding-based deep learning approaches these two steps simultaneously as a single stage holistic solution. In computer vision, annotated training data with consistent segmentation and tracking is resource intensive, the severity of which is multiplied in microscopy imaging due to (1) dense objects (e.g., overlapping or touching), and (2) high dynamics (e.g., irregular motion and mitosis). Adversarial simulations have provided successful solutions to alleviate the lack of such annotations in dynamics scenes in computer vision, such as using simulated environments (e.g., computer games) to train real-world self-driving systems. Methods: In this paper, we propose an annotation-free synthetic instance segmentation and tracking (ASIST) method with adversarial simulation and single-stage pixel-embedding based learning. Contribution: The contribution of this paper is three-fold: (1) the proposed method aggregates adversarial simulations and single-stage pixel-embedding based deep learning; (2) the method is assessed with both the cellular (i.e., HeLa cells) and subcellular (i.e., microvilli) objects; and (3) to the best of our knowledge, this is the first study to explore annotation-free instance segmentation and tracking study for microscope videos. Results: The ASIST method achieved an important step forward, when compared with fully supervised approaches: ASIST shows 7% to 11% higher segmentation, detection and tracking performance on microvilli relative to fully supervised methods, and comparable performance on Hela cell videos.

eess.IV↗

Partner Matters! An Empirical Study on Fusing Personas for Personalized Response Selection in Retrieval-Based Chatbots

Persona can function as the prior knowledge for maintaining the consistency of dialogue systems. Most of previous studies adopted the self persona in dialogue whose response was about to be selected from a set of candidates or directly generated, but few have noticed the role of partner in dialogue. This paper makes an attempt to thoroughly explore the impact of utilizing personas that describe either self or partner speakers on the task of response selection in retrieval-based chatbots. Four persona fusion strategies are designed, which assume personas interact with contexts or responses in different ways. These strategies are implemented into three representative models for response selection, which are based on the Hierarchical Recurrent Encoder (HRE), Interactive Matching Network (IMN) and Bidirectional Encoder Representations from Transformers (BERT) respectively. Empirical studies on the Persona-Chat dataset show that the partner personas neglected in previous studies can improve the accuracy of response selection in the IMN- and BERT-based models. Besides, our BERT-based model implemented with the context-response-aware persona fusion strategy outperforms previous methods by margins larger than 2.7% on original personas and 4.6% on revised personas in terms of hits@1 (top-1 accuracy), achieving a new state-of-the-art performance on the Persona-Chat dataset.

cs.CL↗

Faster Mean-shift: GPU-accelerated clustering for cosine embedding-based cell segmentation and tracking

Recently, single-stage embedding based deep learning algorithms gain increasing attention in cell segmentation and tracking. Compared with the traditional "segment-then-associate" two-stage approach, a single-stage algorithm not only simultaneously achieves consistent instance cell segmentation and tracking but also gains superior performance when distinguishing ambiguous pixels on boundaries and overlaps. However, the deployment of an embedding based algorithm is restricted by slow inference speed (e.g., around 1-2 mins per frame). In this study, we propose a novel Faster Mean-shift algorithm, which tackles the computational bottleneck of embedding based cell segmentation and tracking. Different from previous GPU-accelerated fast mean-shift algorithms, a new online seed optimization policy (OSOP) is introduced to adaptively determine the minimal number of seeds, accelerate computation, and save GPU memory. With both embedding simulation and empirical validation via the four cohorts from the ISBI cell tracking challenge, the proposed Faster Mean-shift algorithm achieved 7-10 times speedup compared to the state-of-the-art embedding based cell instance segmentation and tracking algorithm. Our Faster Mean-shift algorithm also achieved the highest computational speed compared to other GPU benchmarks with optimized memory consumption. The Faster Mean-shift is a plug-and-play model, which can be employed on other pixel embedding based clustering inference for medical image analysis. (Plug-and-play model is publicly available: https://github.com/masqm/Faster-Mean-Shift)

cs.CV↗

SimTriplet: Simple Triplet Representation Learning with a Single GPU

Contrastive learning is a key technique of modern self-supervised learning. The broader accessibility of earlier approaches is hindered by the need of heavy computational resources (e.g., at least 8 GPUs or 32 TPU cores), which accommodate for large-scale negative samples or momentum. The more recent SimSiam approach addresses such key limitations via stop-gradient without momentum encoders. In medical image analysis, multiple instances can be achieved from the same patient or tissue. Inspired by these advances, we propose a simple triplet representation learning (SimTriplet) approach on pathological images. The contribution of the paper is three-fold: (1) The proposed SimTriplet method takes advantage of the multi-view nature of medical images beyond self-augmentation; (2) The method maximizes both intra-sample and inter-sample similarities via triplets from positive pairs, without using negative samples; and (3) The recent mix precision training is employed to advance the training by only using a single GPU with 16GB memory. By learning from 79,000 unlabeled pathological patch images, SimTriplet achieved 10.58% better performance compared with supervised learning. It also achieved 2.13% better performance compared with SimSiam. Our proposed SimTriplet can achieve decent performance using only 1% labeled data. The code and data are available at https://github.com/hrlblab/SimTriple.

cs.CV↗

Tree frog-inspired nanopillar arrays for enhancement of adhesion and friction

Bioinspired structure adhesives have received increasing interest for many applications, such as climbing robots and medical devices. Inspired by the closely packed keratin nanopillars on the toe pads of tree frogs, tightly arranged polycaprolactone nanorod arrays are prepared by mold process and chemical modification. Nanorod arrays show enhanced adhesion and friction on both smooth and rough surfaces compared to the arrays with hexagonal micropillars. The bonding of nanorods results in a larger stiffness of the nanorod surface,contributing mainly to friction rather than adhesion. The results suggest the function of closely packed keratin nanopillars on the toe pad of tree frogs and offer a guiding principle for the designing of new structured adhesives with strong attaching abilities.

cond-mat.soft↗

Learning to Retrieve Entity-Aware Knowledge and Generate Responses with Copy Mechanism for Task-Oriented Dialogue Systems

Task-oriented conversational modeling with unstructured knowledge access, as track 1 of the 9th Dialogue System Technology Challenges (DSTC 9), requests to build a system to generate response given dialogue history and knowledge access. This challenge can be separated into three subtasks, (1) knowledge-seeking turn detection, (2) knowledge selection, and (3) knowledge-grounded response generation. We use pre-trained language models, ELECTRA and RoBERTa, as our base encoder for different subtasks. For subtask 1 and 2, the coarse-grained information like domain and entity are used to enhance knowledge usage. For subtask 3, we use a latent variable to encode dialog history and selected knowledge better and generate responses combined with copy mechanism. Meanwhile, some useful post-processing strategies are performed on the model's final output to make further knowledge usage in the generation task. As shown in released evaluation results, our proposed system ranks second under objective metrics and ranks fourth under human metrics.

cs.CL↗

Exploring End-to-End Differentiable Natural Logic Modeling

We explore end-to-end trained differentiable models that integrate natural logic with neural networks, aiming to keep the backbone of natural language reasoning based on the natural logic formalism while introducing subsymbolic vector representations and neural components. The proposed model adapts module networks to model natural logic operations, which is enhanced with a memory component to model contextual information. Experiments show that the proposed framework can effectively model monotonicity-based reasoning, compared to the baseline neural network models without built-in inductive bias for monotonicity-based reasoning. Our proposed model shows to be robust when transferred from upward to downward inference. We perform further analyses on the performance of the proposed model on aggregation, showing the effectiveness of the proposed subcomponents on helping achieve better intermediate aggregation performance.

cs.CL↗

Direct observation of structural heterogeneity and tautomerization of single hypericin molecules

Tautomerization is a fast chemical reaction where structures of the reactants differ only in the position of a proton and a double bond. Tautomerization often occurs in natural substances and is a fundamental process in organic- and biochemistry. However, studying the optical properties of tautomeric species is challenging due to ensemble averaging. Many molecules, such as porphines, porphycenes or phenanthroperylene quinones, exhibit a reorientation of the transition dipole moment (TDM) during tautomerization, which can be directly observed in a single molecule experiment. A prominent phenanthroperylene quinone is hypericin showing antiviral, antidepressive, and photodynamical properties. Here, we study single hypericin molecules by using confocal microscopy combined with higher order laser modes. Observing abrupt flipping of the image pattern allows to draw conclusions about the coexistence of different tautomers and their conversion path. Time-dependent density functional theory calculations show that hypericin is cycling between the four most stable tautomers. This approach allows to unambiguously assign a TDM orientation to a specific tautomer and enables to determine the chemical structure in situ. Additionally, tautomerization can not only be observed by the image pattern orientation, but also as intermittency in the fluorescence emission of a single molecule. Time correlated single photon counting enables to determine the excited state lifetimes of the hypericin tautomers. Our approach is not only limited to hypericin, but can be applied to other molecules showing a TDM reorientation during tautomerization, helping to get a deeper understanding of this important process.

physics.chem-ph↗

ASIST: Annotation-free synthetic instance segmentation and tracking for microscope video analysis

Instance object segmentation and tracking provide comprehensive quantification of objects across microscope videos. The recent single-stage pixel-embedding based deep learning approach has shown its superior performance compared with "segment-then-associate" two-stage solutions. However, one major limitation of applying a supervised pixel-embedding based method to microscope videos is the resource-intensive manual labeling, which involves tracing hundreds of overlapped objects with their temporal associations across video frames. Inspired by the recent generative adversarial network (GAN) based annotation-free image segmentation, we propose a novel annotation-free synthetic instance segmentation and tracking (ASIST) algorithm for analyzing microscope videos of sub-cellular microvilli. The contributions of this paper are three-fold: (1) proposing a new annotation-free video analysis paradigm is proposed. (2) aggregating the embedding based instance segmentation and tracking with annotation-free synthetic learning as a holistic framework; and (3) to the best of our knowledge, this is first study to investigate microvilli instance segmentation and tracking using embedding based deep learning. From the experimental results, the proposed annotation-free method achieved superior performance compared with supervised learning.

eess.IV↗